Literature DB >> 30806351

Adaptation of olfactory receptor abundances for efficient coding.

Tiberiu Teşileanu1,2,3, Simona Cocco4, Rémi Monasson5, Vijay Balasubramanian2,3.   

Abstract

Olfactory receptor usage is highly heterogeneous, with some receptor types being orders of magnitude more abundant than others. We propose an explanation for this striking fact: the receptor distribution is tuned to maximally represent information about the olfactory environment in a regime of efficient coding that is sensitive to the global context of correlated sensor responses. This model predicts that in mammals, where olfactory sensory neurons are replaced regularly, receptor abundances should continuously adapt to odor statistics. Experimentally, increased exposure to odorants leads variously, but reproducibly, to increased, decreased, or unchanged abundances of different activated receptors. We demonstrate that this diversity of effects is required for efficient coding when sensors are broadly correlated, and provide an algorithm for predicting which olfactory receptors should increase or decrease in abundance following specific environmental changes. Finally, we give simple dynamical rules for neural birth and death processes that might underlie this adaptation.
© 2019, Teşileanu et al.

Entities:  

Keywords:  D. melanogaster; efficient coding; mouse; olfaction; physics of living systems; receptor distribution

Mesh:

Substances:

Year:  2019        PMID: 30806351      PMCID: PMC6398974          DOI: 10.7554/eLife.39279

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  55 in total

1.  Adaptation of olfactory receptor abundances for efficient coding.

Authors:  Tiberiu Teşileanu; Simona Cocco; Rémi Monasson; Vijay Balasubramanian
Journal:  Elife       Date:  2019-02-26       Impact factor: 8.140

2.  A novel multigene family may encode odorant receptors: a molecular basis for odor recognition.

Authors:  L Buck; R Axel
Journal:  Cell       Date:  1991-04-05       Impact factor: 41.582

3.  Emergence of simple-cell receptive field properties by learning a sparse code for natural images.

Authors:  B A Olshausen; D J Field
Journal:  Nature       Date:  1996-06-13       Impact factor: 49.962

Review 4.  Mechanisms of olfactory discrimination: converging evidence for common principles across phyla.

Authors:  J G Hildebrand; G M Shepherd
Journal:  Annu Rev Neurosci       Date:  1997       Impact factor: 12.449

5.  Receptor arrays optimized for natural odor statistics.

Authors:  David Zwicker; Arvind Murugan; Michael P Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-21       Impact factor: 11.205

6.  Predictive coding: a fresh view of inhibition in the retina.

Authors:  M V Srinivasan; S B Laughlin; A Dubs
Journal:  Proc R Soc Lond B Biol Sci       Date:  1982-11-22

Review 7.  Neurogenesis and cell death in olfactory epithelium.

Authors:  A L Calof; N Hagiwara; J D Holcomb; J S Mumm; J Shou
Journal:  J Neurobiol       Date:  1996-05

8.  Learned odor discrimination in Drosophila without combinatorial odor maps in the antennal lobe.

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10.  Extreme expansion of the olfactory receptor gene repertoire in African elephants and evolutionary dynamics of orthologous gene groups in 13 placental mammals.

Authors:  Yoshihito Niimura; Atsushi Matsui; Kazushige Touhara
Journal:  Genome Res       Date:  2014-07-22       Impact factor: 9.043

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  12 in total

1.  Adaptation of olfactory receptor abundances for efficient coding.

Authors:  Tiberiu Teşileanu; Simona Cocco; Rémi Monasson; Vijay Balasubramanian
Journal:  Elife       Date:  2019-02-26       Impact factor: 8.140

2.  Optimal compressed sensing strategies for an array of nonlinear olfactory receptor neurons with and without spontaneous activity.

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Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-23       Impact factor: 11.205

Review 3.  Dynamical self-organization and efficient representation of space by grid cells.

Authors:  Ronald W DiTullio; Vijay Balasubramanian
Journal:  Curr Opin Neurobiol       Date:  2021-11-30       Impact factor: 6.627

Review 4.  Efficient information coding and degeneracy in the nervous system.

Authors:  Pavithraa Seenivasan; Rishikesh Narayanan
Journal:  Curr Opin Neurobiol       Date:  2022-08-17       Impact factor: 7.070

5.  Efficient Coding by Midget and Parasol Ganglion Cells in the Human Retina.

Authors:  Florentina Soto; Jen-Chun Hsiang; Rithwick Rajagopal; Kisha Piggott; George J Harocopos; Steven M Couch; Philip Custer; Josh L Morgan; Daniel Kerschensteiner
Journal:  Neuron       Date:  2020-06-12       Impact factor: 17.173

6.  A transcriptional rheostat couples past activity to future sensory responses.

Authors:  Tatsuya Tsukahara; David H Brann; Stan L Pashkovski; Grigori Guitchounts; Thomas Bozza; Sandeep Robert Datta
Journal:  Cell       Date:  2021-12-07       Impact factor: 41.582

7.  Rat sensitivity to multipoint statistics is predicted by efficient coding of natural scenes.

Authors:  Riccardo Caramellino; Eugenio Piasini; Andrea Buccellato; Anna Carboncino; Vijay Balasubramanian; Davide Zoccolan
Journal:  Elife       Date:  2021-12-07       Impact factor: 8.140

8.  What the odor is not: Estimation by elimination.

Authors:  Vijay Singh; Martin Tchernookov; Vijay Balasubramanian
Journal:  Phys Rev E       Date:  2021-08       Impact factor: 2.529

9.  Pseudosparse neural coding in the visual system of primates.

Authors:  Sidney R Lehky; Keiji Tanaka; Anne B Sereno
Journal:  Commun Biol       Date:  2021-01-08

10.  Efficient coding of natural scene statistics predicts discrimination thresholds for grayscale textures.

Authors:  Tiberiu Tesileanu; Mary M Conte; John J Briguglio; Ann M Hermundstad; Jonathan D Victor; Vijay Balasubramanian
Journal:  Elife       Date:  2020-08-03       Impact factor: 8.140

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