Literature DB >> 3477797

Enhanced protein thermostability from site-directed mutations that decrease the entropy of unfolding.

B W Matthews1, H Nicholson, W J Becktel.   

Abstract

It is proposed that the stability of a protein can be increased by selected amino acid substitutions that decrease the configurational entropy of unfolding. Two such substitutions, one of the form Xaa----Pro and the other of the form Gly----Xaa, were constructed in bacteriophage T4 lysozyme at sites consistent with the known three-dimensional structure. Both substitutions stabilize the protein toward reversible and irreversible thermal denaturation at physiological pH. The substitutions have no effect on enzymatic activity. High-resolution crystallographic analysis of the proline-containing mutant protein (Ala-82----Pro) shows that its three-dimensional structure is essentially identical with the wild-type enzyme. The overall structure of the other mutant enzyme (Gly-77----Ala) is also very similar to wild-type lysozyme, although there are localized conformational adjustments in the vicinity of the altered amino acid. The combination of a number of such amino acid replacements, each of which is expected to contribute approximately 1 kcal/mol (1 cal = 4.184 J) to the free energy of folding, may provide a general strategy for substantial improvement in the stability of a protein.

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Year:  1987        PMID: 3477797      PMCID: PMC299143          DOI: 10.1073/pnas.84.19.6663

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

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Authors:  P Y Chou; G D Fasman
Journal:  Annu Rev Biochem       Date:  1978       Impact factor: 23.643

2.  A genetic screen for mutations that increase the thermal stability of phage T4 lysozyme.

Authors:  T Alber; J A Wozniak
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

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Authors:  A Tsugita; M Inouye
Journal:  J Biol Chem       Date:  1968-01-25       Impact factor: 5.157

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Authors:  P R Schimmel; P J Flory
Journal:  J Mol Biol       Date:  1968-05-28       Impact factor: 5.469

5.  An empirical approach to protein conformation stability and flexibility.

Authors:  T E Creighton
Journal:  Biopolymers       Date:  1983-01       Impact factor: 2.505

6.  Nucleotide sequence of the lysozyme gene of bacteriophage T4. Analysis of mutations involving repeated sequences.

Authors:  J E Owen; D W Schultz; A Taylor; G R Smith
Journal:  J Mol Biol       Date:  1983-04-05       Impact factor: 5.469

7.  Structure of the lysozyme from bacteriophage T4: an electron density map at 2.4 A resolution.

Authors:  S J Remington; W F Anderson; J Owen; L F Ten Eyck; C T Grainger; B W Matthews
Journal:  J Mol Biol       Date:  1978-01-05       Impact factor: 5.469

8.  Genetic analysis of staphylococcal nuclease: identification of three intragenic "global" suppressors of nuclease-minus mutations.

Authors:  D Shortle; B Lin
Journal:  Genetics       Date:  1985-08       Impact factor: 4.562

9.  Disulfide bond engineered into T4 lysozyme: stabilization of the protein toward thermal inactivation.

Authors:  L J Perry; R Wetzel
Journal:  Science       Date:  1984-11-02       Impact factor: 47.728

10.  Oligonucleotide-directed mutagenesis: a simple method using two oligonucleotide primers and a single-stranded DNA template.

Authors:  M J Zoller; M Smith
Journal:  DNA       Date:  1984-12
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  204 in total

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Authors:  J Georis; F de Lemos Esteves; J Lamotte-Brasseur; V Bougnet; B Devreese; F Giannotta; B Granier; J M Frère
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

Review 2.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

3.  The design of a hyperstable mutant of the Abp1p SH3 domain by sequence alignment analysis.

Authors:  A Rath; A R Davidson
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

4.  Use of surface area computations to describe atom-atom interactions.

Authors:  X de La Cruz; M Calvo
Journal:  J Comput Aided Mol Des       Date:  2001-06       Impact factor: 3.686

5.  Strong DNA binding by covalently linked dimeric Lac headpiece: evidence for the crucial role of the hinge helices.

Authors:  C G Kalodimos; G E Folkers; R Boelens; R Kaptein
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

6.  Structural equilibrium fluctuations in mesophilic and thermophilic alpha-amylase.

Authors:  J Fitter; J Heberle
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

7.  Allosteric modulation balances thermodynamic stability and restores function of ΔF508 CFTR.

Authors:  Andrei A Aleksandrov; Pradeep Kota; Liying Cui; Tim Jensen; Alexey E Alekseev; Santiago Reyes; Lihua He; Martina Gentzsch; Luba A Aleksandrov; Nikolay V Dokholyan; John R Riordan
Journal:  J Mol Biol       Date:  2012-03-08       Impact factor: 5.469

8.  Increasing protein conformational stability by optimizing beta-turn sequence.

Authors:  Saul R Trevino; Stephanie Schaefer; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2007-08-09       Impact factor: 5.469

9.  Improving the thermal stability of cellobiohydrolase Cel7A from Hypocrea jecorina by directed evolution.

Authors:  Frits Goedegebuur; Lydia Dankmeyer; Peter Gualfetti; Saeid Karkehabadi; Henrik Hansson; Suvamay Jana; Vicky Huynh; Bradley R Kelemen; Paulien Kruithof; Edmund A Larenas; Pauline J M Teunissen; Jerry Ståhlberg; Christina M Payne; Colin Mitchinson; Mats Sandgren
Journal:  J Biol Chem       Date:  2017-08-31       Impact factor: 5.157

10.  Structures of randomly generated mutants of T4 lysozyme show that protein stability can be enhanced by relaxation of strain and by improved hydrogen bonding via bound solvent.

Authors:  P Pjura; B W Matthews
Journal:  Protein Sci       Date:  1993-12       Impact factor: 6.725

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