Literature DB >> 3896923

Genetic analysis of staphylococcal nuclease: identification of three intragenic "global" suppressors of nuclease-minus mutations.

D Shortle, B Lin.   

Abstract

A collection of 77 unique missense mutations distributed across the gene encoding staphylococcal nuclease (nuc) has been assembled. These mutations were induced by random gap misrepair mutagenesis of the cloned gene and were identified in E. coli transformants expressing reduced levels of nuclease activity. Four nuc- mutations which alter amino acid residues at positions outside of the active site region of the enzyme were submitted to a second round of mutagenesis, and characterization of several independent NUC+ isolates lead to the identification of three second-site suppressor mutations within the protein-coding sequence of the nuc gene. On separation from the mutation originally suppressed and recombination with a number of other nuc- mutations, all three suppressors displayed the property of "global" suppression, i.e., phenotypic suppression of the nuclease-minus character of multiple different alleles. A simple and generally applicable strategy was used to obtain efficient homologous recombination between plasmids for purposes of mapping nuc- mutations, mapping second-site suppressors and constructing double mutant combinations from pairs of single mutations.

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Year:  1985        PMID: 3896923      PMCID: PMC1202580     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  7 in total

1.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

2.  Principles that govern the folding of protein chains.

Authors:  C B Anfinsen
Journal:  Science       Date:  1973-07-20       Impact factor: 47.728

3.  Metachromatic agar-diffusion methods for detecting staphylococcal nuclease activity.

Authors:  R V Lachica; C Genigeorgis; P D Hoeprich
Journal:  Appl Microbiol       Date:  1971-04

4.  Staphylococcal nuclease: proposed mechanism of action based on structure of enzyme-thymidine 3',5'-bisphosphate-calcium ion complex at 1.5-A resolution.

Authors:  F A Cotton; E E Hazen; M J Legg
Journal:  Proc Natl Acad Sci U S A       Date:  1979-06       Impact factor: 11.205

5.  Directed mutagenesis with sodium bisulfite.

Authors:  D Shortle; D Botstein
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

Review 6.  The anatomy and taxonomy of protein structure.

Authors:  J S Richardson
Journal:  Adv Protein Chem       Date:  1981

7.  Staphylococcal nuclease reviewed: a prototypic study in contemporary enzymology. II. Solution studies of the nucleotide binding site and the effects of nucleotide binding.

Authors:  P W Tucker; E E Hazen; F A Cotton
Journal:  Mol Cell Biochem       Date:  1979-01-15       Impact factor: 3.396

  7 in total
  50 in total

1.  Pressure-jump small-angle x-ray scattering detected kinetics of staphylococcal nuclease folding.

Authors:  J Woenckhaus; R Köhling; P Thiyagarajan; K C Littrell; S Seifert; C A Royer; R Winter
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Isocitrate dehydrogenase kinase/phosphatase: identification of mutations which selectively inhibit phosphatase activity.

Authors:  T P Ikeda; E Houtz; D C LaPorte
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

3.  Directed evolution methods for overcoming trade-offs between protein activity and stability.

Authors:  Samuel D Stimple; Matthew D Smith; Peter M Tessier
Journal:  AIChE J       Date:  2019-10-09       Impact factor: 3.993

4.  Predicting the tolerance of proteins to random amino acid substitution.

Authors:  Claus O Wilke; Jesse D Bloom; D Allan Drummond; Alpan Raval
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

5.  Thermodynamic prediction of protein neutrality.

Authors:  Jesse D Bloom; Jonathan J Silberg; Claus O Wilke; D Allan Drummond; Christoph Adami; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-11       Impact factor: 11.205

6.  Thermodynamics of neutral protein evolution.

Authors:  Jesse D Bloom; Alpan Raval; Claus O Wilke
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

7.  Compensatory evolution of a WW domain variant lacking the strictly conserved Trp residue.

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Journal:  J Mol Evol       Date:  2007-12-18       Impact factor: 2.395

8.  Intragenic suppressors of folding defects in the P22 tailspike protein.

Authors:  B Fane; J King
Journal:  Genetics       Date:  1991-02       Impact factor: 4.562

9.  Characterization of an allele-nonspecific intragenic suppressor in the yeast plasma membrane H+-ATPase gene (Pma1).

Authors:  A M Maldonado; N de la Fuente; F Portillo
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

10.  Intragenic dominant suppressors of glp-1, a gene essential for cell-signaling in Caenorhabditis elegans, support a role for cdc10/SWI6/ankyrin motifs in GLP-1 function.

Authors:  J L Lissemore; P D Currie; C M Turk; E M Maine
Journal:  Genetics       Date:  1993-12       Impact factor: 4.562

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