Literature DB >> 3475979

Multipoint gene mapping using seriation. II. Analysis of simulated and empirical data.

K H Buetow, A Chakravarti.   

Abstract

Seriation methods provide an accurate and efficient means of constructing preliminary multilocus genetic maps. By using both simulated and previously published empirical data, multipoint mapping by seriation was critically evaluated. Analysis of the simulated data sets showed that the seriation methodology could accurately estimate order and interlocus distances. Application to the empirical data demonstrated that seriation could obtain results directly comparable with those of other multipoint mapping methods. Techniques such as seriation can produce preliminary genetic maps that may be used as starting points for more computer-intensive maximum-likelihood multipoint techniques.

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Year:  1987        PMID: 3475979      PMCID: PMC1684234     

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  12 in total

1.  Estimation of the recombination fraction in human pedigrees: efficient computation of the likelihood for human linkage studies.

Authors:  J Ott
Journal:  Am J Hum Genet       Date:  1974-09       Impact factor: 11.025

2.  Report of the Committee on the Genetic Constitution of Chromosomes 10, 11, and 12.

Authors:  K H Grzeschik; H H Kazazian
Journal:  Cytogenet Cell Genet       Date:  1985

3.  The analysis of X-linkage.

Authors:  J H Edwards
Journal:  Ann Hum Genet       Date:  1971-02       Impact factor: 1.670

4.  Family data on sixteen chromosome 1 loci.

Authors:  E B Robson; J King
Journal:  Ann Hum Genet       Date:  1984-10       Impact factor: 1.670

5.  A computer program for constructing a maximum-likelihood map from linkage data and its application to human chromosome 1.

Authors:  N Wedd
Journal:  Ann Hum Genet       Date:  1984-10       Impact factor: 1.670

6.  c-Ha-ras-1 oncogene lies between beta-globin and insulin loci on human chromosome 11p.

Authors:  E R Fearon; S E Antonarakis; D A Meyers; M A Levine
Journal:  Am J Hum Genet       Date:  1984-03       Impact factor: 11.025

7.  A revised map of chromosome 1.

Authors:  S L Sherman; J King; E B Robson; S Yee
Journal:  Ann Hum Genet       Date:  1984-07       Impact factor: 1.670

8.  A mapping function for man.

Authors:  D C Rao; N E Morton; J Lindsten; M Hultén; S Yee
Journal:  Hum Hered       Date:  1977       Impact factor: 0.444

9.  Strategies for multilocus linkage analysis in humans.

Authors:  G M Lathrop; J M Lalouel; C Julier; J Ott
Journal:  Proc Natl Acad Sci U S A       Date:  1984-06       Impact factor: 11.205

10.  The search for heterogeneity in insulin-dependent diabetes mellitus (IDDM): linkage studies, two-locus models, and genetic heterogeneity.

Authors:  S E Hodge; C E Anderson; K Neiswanger; R S Sparkes; D L Rimoin
Journal:  Am J Hum Genet       Date:  1983-11       Impact factor: 11.025

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  10 in total

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Authors:  D I Mester; Y I Ronin; Y Hu; J Peng; E Nevo; A B Korol
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5.  Monte Carlo comparison of preliminary methods for ordering multiple genetic loci.

Authors:  J M Olson; M Boehnke
Journal:  Am J Hum Genet       Date:  1990-09       Impact factor: 11.025

6.  Multipoint gene mapping using seriation. I. General methods.

Authors:  K H Buetow; A Chakravarti
Journal:  Am J Hum Genet       Date:  1987-08       Impact factor: 11.025

7.  Characterizing uncertainty in high-density maps from multiparental populations.

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Journal:  Genet Mol Biol       Date:  2010-06-01       Impact factor: 1.771

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  10 in total

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