Literature DB >> 34616040

A single sulfatase is required to access colonic mucin by a gut bacterium.

Ana S Luis1,2, Chunsheng Jin3, Gabriel Vasconcelos Pereira4, Robert W P Glowacki4, Sadie R Gugel4, Shaleni Singh4, Dominic P Byrne5, Nicholas A Pudlo4, James A London5, Arnaud Baslé6, Mark Reihill7, Stefan Oscarson7, Patrick A Eyers5, Mirjam Czjzek8, Gurvan Michel8, Tristan Barbeyron8, Edwin A Yates5, Gunnar C Hansson3, Niclas G Karlsson3, Alan Cartmell9, Eric C Martens10.   

Abstract

Humans have co-evolved with a dense community of microbial symbionts that inhabit the lower intestine. In the colon, secreted mucus creates a barrier that separates these microorganisms from the intestinal epithelium1. Some gut bacteria are able to utilize mucin glycoproteins, the main mucus component, as a nutrient source. However, it remains unclear which bacterial enzymes initiate degradation of the complex O-glycans found in mucins. In the distal colon, these glycans are heavily sulfated, but specific sulfatases that are active on colonic mucins have not been identified. Here we show that sulfatases are essential to the utilization of distal colonic mucin O-glycans by the human gut symbiont Bacteroides thetaiotaomicron. We characterized the activity of 12 different sulfatases produced by this species, showing that they are collectively active on all known sulfate linkages in O-glycans. Crystal structures of three enzymes provide mechanistic insight into the molecular basis of substrate specificity. Unexpectedly, we found that a single sulfatase is essential for utilization of sulfated O-glycans in vitro and also has a major role in vivo. Our results provide insight into the mechanisms of mucin degradation by a prominent group of gut bacteria, an important process for both normal microbial gut colonization2 and diseases such as inflammatory bowel disease3.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

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Year:  2021        PMID: 34616040      PMCID: PMC9128668          DOI: 10.1038/s41586-021-03967-5

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   69.504


  62 in total

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

2.  Structure elucidation of glycosphingolipids and gangliosides using high-performance tandem mass spectrometry.

Authors:  B Domon; C E Costello
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

3.  Molecular replacement with MOLREP.

Authors:  Alexei Vagin; Alexei Teplyakov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

4.  Updates to the Symbol Nomenclature for Glycans guidelines.

Authors:  Sriram Neelamegham; Kiyoko Aoki-Kinoshita; Evan Bolton; Martin Frank; Frederique Lisacek; Thomas Lütteke; Noel O'Boyle; Nicolle H Packer; Pamela Stanley; Philip Toukach; Ajit Varki; Robert J Woods
Journal:  Glycobiology       Date:  2019-08-20       Impact factor: 4.313

5.  Identification and characterization of a sulfoglycosidase from Bifidobacterium bifidum implicated in mucin glycan utilization.

Authors:  Toshihiko Katoh; Takako Maeshibu; Kei-Ichi Kikkawa; Aina Gotoh; Yusuke Tomabechi; Motoharu Nakamura; Wei-Hsiang Liao; Masanori Yamaguchi; Hisashi Ashida; Kenji Yamamoto; Takane Katayama
Journal:  Biosci Biotechnol Biochem       Date:  2017-08-17       Impact factor: 2.043

6.  Glycosulfatase-Encoding Gene Cluster in Bifidobacterium breve UCC2003.

Authors:  Muireann Egan; Hao Jiang; Mary O'Connell Motherway; Stefan Oscarson; Douwe van Sinderen
Journal:  Appl Environ Microbiol       Date:  2016-10-27       Impact factor: 4.792

7.  Human gut microbes use multiple transporters to distinguish vitamin B₁₂ analogs and compete in the gut.

Authors:  Patrick H Degnan; Natasha A Barry; Kenny C Mok; Michiko E Taga; Andrew L Goodman
Journal:  Cell Host Microbe       Date:  2014-01-15       Impact factor: 21.023

8.  Anaerobic sulfatase-maturating enzymes, first dual substrate radical S-adenosylmethionine enzymes.

Authors:  Alhosna Benjdia; Sowmya Subramanian; Jérôme Leprince; Hubert Vaudry; Michael K Johnson; Olivier Berteau
Journal:  J Biol Chem       Date:  2008-04-11       Impact factor: 5.157

9.  The Jalview Java alignment editor.

Authors:  Michele Clamp; James Cuff; Stephen M Searle; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2004-01-22       Impact factor: 6.937

10.  New tools for carbohydrate sulfation analysis: heparan sulfate 2-O-sulfotransferase (HS2ST) is a target for small-molecule protein kinase inhibitors.

Authors:  Dominic P Byrne; Yong Li; Krithika Ramakrishnan; Igor L Barsukov; Edwin A Yates; Claire E Eyers; Dulcé Papy-Garcia; Sandrine Chantepie; Vijayakanth Pagadala; Jian Liu; Carrow Wells; David H Drewry; William J Zuercher; Neil G Berry; David G Fernig; Patrick A Eyers
Journal:  Biochem J       Date:  2018-08-14       Impact factor: 3.857

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  12 in total

1.  Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota.

Authors:  Matthew P Ostrowski; Sabina Leanti La Rosa; Benoit J Kunath; Andrew Robertson; Gabriel Pereira; Live H Hagen; Neha J Varghese; Ling Qiu; Tianming Yao; Gabrielle Flint; James Li; Sean P McDonald; Duna Buttner; Nicholas A Pudlo; Matthew K Schnizlein; Vincent B Young; Harry Brumer; Thomas M Schmidt; Nicolas Terrapon; Vincent Lombard; Bernard Henrissat; Bruce Hamaker; Emiley A Eloe-Fadrosh; Ashootosh Tripathi; Phillip B Pope; Eric C Martens
Journal:  Nat Microbiol       Date:  2022-04-01       Impact factor: 17.745

Review 2.  The role of goblet cells and mucus in intestinal homeostasis.

Authors:  Jenny K Gustafsson; Malin E V Johansson
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2022-09-12       Impact factor: 73.082

3.  Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota.

Authors:  Ana S Luis; Arnaud Baslé; Dominic P Byrne; Gareth S A Wright; James A London; Chunsheng Jin; Niclas G Karlsson; Gunnar C Hansson; Patrick A Eyers; Mirjam Czjzek; Tristan Barbeyron; Edwin A Yates; Eric C Martens; Alan Cartmell
Journal:  Nat Chem Biol       Date:  2022-06-16       Impact factor: 16.174

4.  Functional Insights into the Kelp Microbiome from Metagenome-Assembled Genomes.

Authors:  Brooke L Weigel; Khashiff K Miranda; Emily C Fogarty; Andrea R Watson; Catherine A Pfister
Journal:  mSystems       Date:  2022-06-01       Impact factor: 7.324

5.  Genome-centric investigation of bile acid metabolizing microbiota of dairy cows and associated diet-induced functional implications.

Authors:  Limei Lin; Zheng Lai; Huisheng Yang; Jiyou Zhang; Weibiao Qi; Fei Xie; Shengyong Mao
Journal:  ISME J       Date:  2022-10-19       Impact factor: 11.217

Review 6.  Carbohydrate-active enzymes (CAZymes) in the gut microbiome.

Authors:  Jacob F Wardman; Rajneesh K Bains; Peter Rahfeld; Stephen G Withers
Journal:  Nat Rev Microbiol       Date:  2022-03-28       Impact factor: 78.297

Review 7.  How microbial glycosyl hydrolase activity in the gut mucosa initiates microbial cross-feeding.

Authors:  Maryse D Berkhout; Caroline M Plugge; Clara Belzer
Journal:  Glycobiology       Date:  2022-03-30       Impact factor: 4.313

Review 8.  The barrier and beyond: Roles of intestinal mucus and mucin-type O-glycosylation in resistance and tolerance defense strategies guiding host-microbe symbiosis.

Authors:  Kirk Bergstrom; Lijun Xia
Journal:  Gut Microbes       Date:  2022 Jan-Dec

Review 9.  Utilization of glycosaminoglycans by the human gut microbiota: participating bacteria and their enzymatic machineries.

Authors:  Parkash Singh Rawat; Ahkam Saddam Seyed Hameed; Xiangfeng Meng; Weifeng Liu
Journal:  Gut Microbes       Date:  2022 Jan-Dec

10.  Host-microbiota interaction-mediated resistance to inflammatory bowel disease in pigs.

Authors:  Xuan Zhao; Lin Jiang; Xiuyu Fang; Zhiqiang Guo; Xiaoxu Wang; Baoming Shi; Qingwei Meng
Journal:  Microbiome       Date:  2022-07-30       Impact factor: 16.837

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