Literature DB >> 3456157

A purified transcription factor (TIF-IB) binds to essential sequences of the mouse rDNA promoter.

J Clos, D Buttgereit, I Grummt.   

Abstract

A transcription factor that is specific for mouse rDNA has been partially purified from Ehrlich ascites cells. This factor [designated transcription initiation factor (TIF)-IB] is required for accurate in vitro synthesis of mouse rRNA in addition to RNA polymerase I and another regulatory factor, TIF-IA. TIF-IB activity is present in extracts both from growing and nongrowing cells in comparable amounts. Prebinding competition experiments with wild-type and mutant templates suggest that TIF-IB interacts with the core control element of the rDNA promoter, which is located immediately upstream of the initiation site. The specific binding of TIF-IB to the RNA polymerase I promoter is demonstrated by exonuclease III protection experiments. The 3' border of the sequences protected by TIF-IB is shown to be on the coding strand at position -21 and on the noncoding strand at position -7. The results suggest that direct binding of TIF-IB to sequences in the core promoter element is the mechanism by which this factor imparts promoter selectivity to RNA polymerase I.

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Year:  1986        PMID: 3456157      PMCID: PMC322912          DOI: 10.1073/pnas.83.3.604

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I.

Authors:  R M Learned; S Cordes; R Tjian
Journal:  Mol Cell Biol       Date:  1985-06       Impact factor: 4.272

2.  Species-specific rDNA transcription is due to promoter-specific binding factors.

Authors:  R Miesfeld; N Arnheim
Journal:  Mol Cell Biol       Date:  1984-02       Impact factor: 4.272

3.  The canine major histocompatibility complex. Supertypic specificities defined by the primed lymphocyte test (PLT).

Authors:  W C Ladiges; R F Raff; S Brown; H J Deeg; R Storb
Journal:  Immunogenetics       Date:  1984       Impact factor: 2.846

Review 4.  Transcription of class III genes: formation of preinitiation complexes.

Authors:  A B Lassar; P L Martin; R G Roeder
Journal:  Science       Date:  1983-11-18       Impact factor: 47.728

5.  Determination of the promoter region of mouse ribosomal RNA gene by an in vitro transcription system.

Authors:  O Yamamoto; N Takakusa; Y Mishima; R Kominami; M Muramatsu
Journal:  Proc Natl Acad Sci U S A       Date:  1984-01       Impact factor: 11.205

6.  A component of Drosophila RNA polymerase I promoter lies within the rRNA transcription unit.

Authors:  B D Kohorn; P M Rae
Journal:  Nature       Date:  1983 Jul 14-20       Impact factor: 49.962

7.  Regulation of human ribosomal RNA transcription.

Authors:  R M Learned; S T Smale; M M Haltiner; R Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

8.  On the mechanism of nucleolar dominance in mouse-human somatic cell hybrids.

Authors:  T Onishi; C Berglund; R H Reeder
Journal:  Proc Natl Acad Sci U S A       Date:  1984-01       Impact factor: 11.205

9.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

10.  Isolation of a class C transcription factor which forms a stable complex with tRNA genes.

Authors:  A Ruet; S Camier; W Smagowicz; A Sentenac; P Fromageot
Journal:  EMBO J       Date:  1984-02       Impact factor: 11.598

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  48 in total

1.  Characterization of nucleotide sequences that interact with a nuclear protein fraction in rRNA gene of Vicia faba.

Authors:  T Nakajima; A Suzůki; S Tanifuji; A Kato
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

2.  Dual role of the nucleolar transcription factor UBF: trans-activator and antirepressor.

Authors:  A Kuhn; I Grummt
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

3.  Purification of components required for accurate transcription of ribosomal RNA from Acanthamoeba castellanii.

Authors:  C T Iida; M R Paule
Journal:  Nucleic Acids Res       Date:  1992-06-25       Impact factor: 16.971

4.  Complex formation of nuclear proteins with the RNA polymerase I promoter and repeated elements in the external transcribed spacer of Cucumis sativus ribosomal DNA.

Authors:  U Zentgraf; V Hemleben
Journal:  Nucleic Acids Res       Date:  1992-07-25       Impact factor: 16.971

Review 5.  The nucleolus—guardian of cellular homeostasis and genome integrity.

Authors:  Ingrid Grummt
Journal:  Chromosoma       Date:  2013-12       Impact factor: 4.316

6.  The mouse ribosomal DNA promoter has more stringent requirements in vivo than in vitro.

Authors:  S L Henderson; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  1990-09       Impact factor: 4.272

7.  Ribosomal gene promoter domains can function as artificial enhancers of RNA polymerase I transcription, supporting a promoter origin for natural enhancers in Xenopus.

Authors:  C S Pikaard
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-18       Impact factor: 11.205

8.  Characterization of factors that direct transcription of rat ribosomal DNA.

Authors:  S D Smith; E Oriahi; D Lowe; H F Yang-Yen; D O'Mahony; K Rose; K Chen; L I Rothblum
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

9.  Coordination of Ribosomal Protein and Ribosomal RNA Gene Expression in Response to TOR Signaling.

Authors:  Lijuan Xiao; Anne Grove
Journal:  Curr Genomics       Date:  2009-05       Impact factor: 2.236

10.  Acanthamoeba castellanii contains a ribosomal RNA enhancer binding protein which stimulates TIF-IB binding and transcription under stringent conditions.

Authors:  Q Yang; C A Radebaugh; W Kubaska; G K Geiss; M R Paule
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

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