Literature DB >> 34537229

A simple derivation of the mean of the Sackin index of tree balance under the uniform model on rooted binary labeled trees.

Matthew C King1, Noah A Rosenberg2.   

Abstract

In mathematical phylogenetics, the Sackin index, measuring the sum of path lengths between leaves and the root, is one of the most frequently used measures of balance for phylogenetic trees. The uniform model, in which all rooted binary labeled trees for a given set of leaf labels are assumed to be equiprobable, is one of the most frequently used models for describing a probability distribution on the set of rooted binary labeled trees. This note provides a simple new derivation of the mean value of the Sackin index of tree balance under the uniform model on rooted binary labeled trees. The new derivation suggests a simple form of the mean Sackin index in terms of the Catalan numbers, quickly enabling a verification of the asymptotic value for the mean.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Catalan numbers; Phylogenetics; Tree balance

Mesh:

Year:  2021        PMID: 34537229      PMCID: PMC8629161          DOI: 10.1016/j.mbs.2021.108688

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  12 in total

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9.  On the minimum value of the Colless index and the bifurcating trees that achieve it.

Authors:  Tomás M Coronado; Mareike Fischer; Lina Herbst; Francesc Rosselló; Kristina Wicke
Journal:  J Math Biol       Date:  2020-04-07       Impact factor: 2.259

10.  The expected value of the squared cophenetic metric under the Yule and the uniform models.

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Journal:  Math Biosci       Date:  2017-11-16       Impact factor: 2.144

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