| Literature DB >> 34533238 |
Jorge Hernández-Bello1, Miroslaba Rodríguez-Puente2, Jorge Gutiérrez-Cuevas3, Samuel García-Arellano1, José Francisco Muñoz-Valle1, Mary Fafutis-Morris4, Delfina Guadalupe Villanueva-Quintero5, Anabell Alvarado-Navarro4.
Abstract
BACKGROUND: Macrophage inhibitory factor (MIF) is a pro-inflammatory cytokine secreted by several cells, including those in the immune system and the skin. The MIF gene contains the SNP -173 G> C and STR -794 CATT5-8 polymorphisms in the promoter region capable of affecting its activity. Our objective was to investigate the MIF polymorphisms as a risk factor for plaque psoriasis (PP) in the Mexican population.Entities:
Keywords: MIF; genetic susceptibility; haplotypes; plaque psoriasis; polymorphisms
Mesh:
Substances:
Year: 2021 PMID: 34533238 PMCID: PMC8605153 DOI: 10.1002/jcla.23999
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 2.352
FIGURE 1Genotypes identification of the SNP ‐173 G>C and STR‐794 CATT5‐8 of the MIF gene. The figures show polyacrylamide gels. (A) SNP ‐173 G>C: lanes 4,5,7,10 (GG genotypes); lanes 1–3,9 (GC genotypes); lanes 8,11 (CC genotypes); lane 6 (molecular weight marker of 50 bp). (B) STR‐794 CATT5‐8: lanes 2,4 (5,6 genotypes); lane 3,7 (6,7 genotypes); lanes 5,9 (undetermined genotypes); lane 8 (6,6 genotype); lane 10 (7,7 genotype); lanes 1, 11 (allelic ladder of the four repetitions); lane 6 (molecular weight marker of 10 bp). Undetermined samples were analyzed in duplicate on a new electrophoresis
Clinical and demographic characteristics of PP patients and CS
| Characteristics | PP ( | CS ( |
|
|---|---|---|---|
| Age | 50 (36–59) | 38 (25–48) | <0.0001 |
| Gender, | |||
| Female | 86 (38) | 129 (56) | <0.001 |
| Male | 138 (62) | 103 (44) | |
| Time of evolution of the disease | 10 ± 0.63 | ‐ | |
| PASI | 6 ± 0.46 | ‐ | |
| Treatment, | |||
| Topical (exfoliants) | 78 (35) | ‐ | |
| Systemic | 77 (34) | ‐ | |
| Without | 69 (31) | ‐ | |
| Comorbidities, | |||
| Obesity | 15 (7) | ‐ | |
| Hypertension | 25 (11) | ‐ | |
| Hypercholesterolemia | 9 (4) | ‐ | |
Abbreviations: CS, Control subjects; PP, plaque psoriasis patients.
Data are expressed as median (p25th–p75th).
Data are expressed as mean ± standard error.
Genotype and allele frequencies of ‐794 CATT5‐8 and ‐173 G>C MIF polymorphisms in PP patients and CS
| Polymorphism | PP | CS | OR (CI 95%) |
|
|---|---|---|---|---|
| MIF ‐794 CATT5‐8 (rs5844572) | ||||
| Genotype | ||||
| 5,5 | 3.5 (8) | 3 (6) | 1.47 (0.421–5.403) | 0.49 |
| 5,6 | 25 (56) | 29 (68) | 0.91 (0.544–1.510) | 0.69 |
| 5,7 | 9.5 (22) | 5 (12) | 2.02 (0.880–4.822) | 0.07 |
| 5,8 | 0.5 (1) | ‐ | ‐ | ‐ |
| 6,6 | 31 (69) | 33 (76) | 1 | ‐ |
| 6,7 | 23 (51) | 23 (54) | 1.04 (0.615–1.770) | 0.88 |
| 6,8 | 0.5 (1) | 1 (2) | 0.55 (0.010–10.830) | 0.62 |
| 7,7 | 7 (16) | 6 (14) | 1.26 (0.534–3.012) | 0.57 |
| Allele | ||||
| 5 | 21 (95) | 20 (92) | 1.16 (0.820–1.640) | 0.39 |
| 6 | 55 (246) | 59.5 (276) | 1 | ‐ |
| 7 | 23.5 (105) | 20 (94) | 1.25 (0.891–1.763) | 0.17 |
| 8 | 0.5 (2) | 0.5 (2) | ‐ |
|
| MIF ‐173 G>C (rs755622) | ||||
| Genotype | ||||
| GG | 48 (107) | 58 (135) | 1 | ‐ |
| GC | 44 (99) | 35 (82) | 1.51 (1.026–2.228) |
|
| CC | 8 (18) | 7 (15) | 1.51 (0.724–3.121) | 0.26 |
| Allele | ||||
| G | 70 (313) | 76 (352) | 1 | ‐ |
| C | 30 (135) | 24 (112) | 1.34 (1.005–1.807) |
|
| Genetic models | ||||
|
| ||||
| GG | 48 (107) | 58 (135) | 1 | ‐ |
| GC+CC | 52 (117) | 42 (97) | 1.51 (1.043–2.187) |
|
|
| ||||
| GG+GC | 92 (206) | 93 (217) | 1 | |
| CC | 8 (18) | 7 (15) | 1.25 (0.618–2.563) | 0.52 |
Abbreviations: PP, plaque psoriasis patients; CS, control subjects; OR, odds ratio; CI, confidence interval.
Chi‐square test.
Reference category.
Bold values denote statistical significance at the p < 0.05 level.
FIGURE 2Pairwise linkage disequilibrium relationships between the MIF ‐794 CATT5–8 and MIF ‐173 G>C variants. (A) Lewontin's coefficient D′ and (B) the correlation coefficient R 2 was calculated using SHEsis software
Haplotype frequencies of ‐794 CATT5‐8 and ‐173 G>C MIF polymorphisms in PP and CS
| Haplotype | PP % ( | CS % ( | OR (CI 95%) |
|
|---|---|---|---|---|
| 5C | 1 (5) | 2 (8) | 0.78 (0.20–2.74) | 0.66 |
| 5G | 20 (90) | 18 (84) | 1.33 (0.92–1.92) | 0.11 |
| 6C | 10 (44) | 6 (26) | 2.10 (1.22–3.69) |
|
| 6G | 45 (201) | 54 (250) | 1 | ‐ |
| 7C | 19 (84) | 16 (77) | 1.36 (0.93–1.98) | 0.10 |
| 7G | 5 (21) | 4 (17) | 1.54(0.75–3.19) | 0.20 |
| 8C | 0 (2) | 0 (1) | 2.47 (0.13–147) | 0.44 |
| 8G | 0 (1) | ‐ | ‐ |
|
Abbreviations: PP, Plaque psoriasis patients; CS, control subjects; OR, odds ratio; CI, confidence interval.
Reference category. The p‐value was calculated by logistic regression comparison with the reference haplotype 6G.
FIGURE 3Comparison of MIF serum levels. (A) MIF serum levels of PP patients and CS. (B) Comparison of MIF serum levels by treatment in PP patients. p‐Value was calculated using U‐Mann–Whitney; the data are provided in medians and p25th–p75th
FIGURE 4MIF serum levels according to ‐173 G>C and ‐794 CATT5‐8 MIF polymorphisms in PP patients and CS. MIF serum levels according to MIF ‐173 G > C genotypes in plaque psoriasis (PP) patients (A) and CS (B). C and D show MIF serum levels according to different MIF ‐794 CATT5‐8 genotypes in PP patients and CS, respectively. p‐Values were calculated by the Kruskal–Wallis test, followed by Dunn's adjustment for multiple comparisons. The data are provided in medians and p25th–p75th. PP, Plaque psoriasis patients; CS, control subjects