| Literature DB >> 35983127 |
Danfeng Wang1,2, Shuhui Min1,2, Xiao Lin1,2, Guan Jiang1,2.
Abstract
Objective: The aim of the present study was to investigate the association of single-nucleotide polymorphisms (SNPs) in the macrophage migration inhibiting factor (MIF), interferon-induced Helicase C domain 1 (IFIH1), interleukin-6 (IL6) genes, circulating levels with non-segmental vitiligo (NSV) susceptibility in the Chinese population, and to analyze the relationships between gene polymorphisms and clinical characteristics of vitiligo.Entities:
Keywords: IFIH1; IL6; MIF; single nucleotide polymorphism; vitiligo
Year: 2022 PMID: 35983127 PMCID: PMC9380431 DOI: 10.2147/CCID.S369418
Source DB: PubMed Journal: Clin Cosmet Investig Dermatol ISSN: 1178-7015
Primer Sequences
| Internal Reference | Upstream Primer | Downstream Primer |
|---|---|---|
| 5’-GGGACTGGAGCCCTTGA-3’ | 5’-TCCGCCCGTTCCTCCA-3’ | |
| 5’-TATCAATGGCAACCACATGC-3’ | 5’-GAGCCAGAGCTGATGAGAGC-3’ | |
| 5’-GAGACTCAGTGGCAATGGGG-3’ | 5’-CAAGCCTGGGATTATGAAGAAG-3’ |
Figure 1(A) Genotype sequencing of MIF-173G/C polymorphism; (B) Genotype sequencing of IFIH1 H843R polymorphism; (C) Genotype sequencing of IL6-572G/C polymorphism.
Demographic Data Among the Patient Groups
| Parameter | Cases (N=155) | Controls (N=117) | |
|---|---|---|---|
| Gender | 0.905 | ||
| Male | 81 (52.26%) | 62 (52.99%) | |
| Female | 74 (47.74%) | 55 (47.01%) | |
| Mean age (years) | 24.77 ± 18.07 | 23.38 ± 10.64 | 0.460 |
| Age of onset | |||
| Early (≤ 20 years old) | 96 (61.94%) | ||
| Late (> 20 years old) | 59 (38.06%) | ||
| Disease duration (months) | 20.15 ± 39.21 | ||
| Disease activity | |||
| Active | 102 (65.81%) | ||
| Stable | 53 (34.19%) | ||
| Family history | |||
| Positive | 18 (11.61%) | ||
| Negative | 137 (88.39%) | ||
| Halo nevus | |||
| Positive | 9 (5.81%) | ||
| Negative | 146 (94.19%) | ||
| Types | |||
| Acrofacial | 95 (61.29%) | ||
| Generalized | 57 (36.77%) | ||
| Mucosal | 2 (1.29%) | ||
| Universal | 1 (0.65%) |
Hardy-Weinberg Balance Test Results of Non-Segmental Vitiligo and Control Group
| SNP | Genotype | ||||
|---|---|---|---|---|---|
| n (%) | |||||
| Vitiligo group | |||||
| GG | CG | CC | 0.482 | 0.786 | |
| 97 (62.58) | 53 (34.19) | 5 (3.23) | |||
| TT | CT | CC | 0.058 | 0.971 | |
| 60 (38.71) | 74 (47.74) | 21 (13.55) | |||
| CC | CG | GG | 0.001 | 0.999 | |
| 78 (50.32) | 64 (41.29) | 13 (8.39) | |||
| Control group | |||||
| GG | CG | CC | 0.663 | 0.718 | |
| 80 (68.38) | 35 (29.91) | 2 (1.71) | |||
| TT | CT | CC | 0.352 | 0.839 | |
| 63 (53.85) | 44 (37.60) | 10 (8.55) | |||
| CC | CG | GG | 0.032 | 0.984 | |
| 76 (64.96) | 37 (31.62) | 4 (3.42) | |||
MIF-173G/C, IFIH1H843R, IL6-572G/C Genotypes and Allele Frequencies in Patient Groups
| Cases(N=155) | Controls(N=117) | OR(CI 95%) | |||||
|---|---|---|---|---|---|---|---|
| N. | % | N. | % | ||||
| Genotype: | |||||||
| GG | 97 | 62.58 | 80 | 68.38 | 1.249a | 0.529a | |
| CG | 53 | 34.19 | 35 | 29.91 | 0.704 | 0.401 | 1.249 (0.743–2.100) |
| CC | 5 | 3.23 | 2 | 1.71 | NA | 0.464 | 2.062 (0.390–10.913) |
| Allele: | |||||||
| G | 247 | 79.68 | 195 | 83.33 | |||
| C | 63 | 20.32 | 39 | 16.67 | 1.170 | 0.279 | 1.275 (0.820–1.983) |
| Dominant model analysis: | |||||||
| GG | 97 | 62.58 | 80 | 68.38 | |||
| CC+CG | 58 | 37.42 | 37 | 31.62 | 0.985 | 0.321 | 1.293 (0.778–2.148) |
| Genotype: | |||||||
| TT | 60 | 38.71 | 63 | 53.85 | 6.420a | 0.040a | |
| CT | 74 | 47.74 | 44 | 37.60 | 4.735 | 0.030 | 1.766 (1.056–2.953) |
| CC | 21 | 13.55 | 10 | 8.55 | 3.570 | 0.059 | 2.205 (0.960–5.066) |
| Allele: | |||||||
| T | 194 | 62.58 | 170 | 72.65 | |||
| C | 116 | 37.42 | 64 | 27.35 | 6.106 | 0.013 | 1.588 (1.099–2.295) |
| Dominant model analysis: | |||||||
| TT | 60 | 38.71 | 63 | 53.85 | |||
| CC+CT | 95 | 61.29 | 54 | 46.15 | 6.167 | 0.013 | 1.847 (1.136–3.004) |
| Genotype: | |||||||
| CC | 78 | 50.32 | 76 | 64.96 | 6.833a | 0.033a | |
| CG | 64 | 41.29 | 37 | 31.62 | 3.997 | 0.046 | 1.685 (1.009–2.816) |
| GG | 13 | 8.39 | 4 | 3.42 | 4.100 | 0.043 | 3.167 (0.988–10.145) |
| Allele: | |||||||
| C | 220 | 70.97 | 189 | 80.77 | |||
| G | 90 | 29.03 | 45 | 19.23 | 6.866 | 0.009 | 1.718 (1.143–2.582) |
| Dominant model analysis: | |||||||
| CC | 78 | 50.32 | 76 | 64.96 | |||
| CG+GG | 77 | 49.68 | 41 | 35.04 | 5.814 | 0.016 | 1.830 (1.117–2.997) |
Note: aChi-square test and P value were compared between vitiligo group and control group.
Abbreviation: NA, not available.
Distribution of MIF-173G/C, IFIH1 H843R, and IL6-572G/C Polymorphisms in Clinical Features of Vitiligo
| Parameter | rs755622 | rs3747517 | rs1800796 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GG | CG | CC | TT | CT | CC | CC | CG | GG | |||||||
| Gender | 0.485 | 0.831 | 2.432 | 0.296 | 1.673 | 0.433 | |||||||||
| Male | 52 | 26 | 3 | 34 | 34 | 13 | 39 | 33 | 9 | ||||||
| Female | 45 | 27 | 2 | 26 | 40 | 8 | 39 | 31 | 4 | ||||||
| Age of onset | 1.204 | 0.579 | 7.224 | 0.027 | 0.856 | 0.652 | |||||||||
| Early | 60 | 34 | 2 | 45 | 39 | 12 | 51 | 37 | 8 | ||||||
| Late | 37 | 19 | 3 | 15 | 35 | 9 | 27 | 27 | 5 | ||||||
| Family history | 1.234 | 0.478 | 6.979 | 0.031 | 3.207 | 0.201 | |||||||||
| Positive | 10 | 7 | 1 | 12 | 4 | 2 | 6 | 9 | 3 | ||||||
| Negative | 87 | 46 | 4 | 48 | 70 | 19 | 72 | 55 | 10 | ||||||
| Types | 6.972 | 0.435 | 3.410 | 0.857 | 4.102 | 0.779 | |||||||||
| Acrofacial | 63 | 30 | 2 | 40 | 42 | 13 | 45 | 42 | 8 | ||||||
| Generalized | 33 | 21 | 3 | 19 | 30 | 8 | 30 | 22 | 5 | ||||||
| Universal | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | ||||||
| Mucosal | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 0 | 0 | ||||||
| Disease activity | 6.527 | 0.029 | 7.020 | 0.030 | 0.807 | 0.668 | |||||||||
| Active | 57 | 40 | 5 | 47 | 42 | 13 | 51 | 41 | 10 | ||||||
| Stable | 40 | 13 | 0 | 13 | 32 | 8 | 27 | 23 | 3 | ||||||
| Halo nevus | 7.762 | 0.014 | 0.145 | 0.930 | 0.349 | 1.000 | |||||||||
| Positive | 6 | 1 | 2 | 4 | 4 | 1 | 5 | 4 | 0 | ||||||
| Negative | 91 | 52 | 3 | 56 | 70 | 20 | 73 | 60 | 13 | ||||||
Allele Frequencies of MIF-173G/C, and IFIH1H843R Polymorphisms in Clinical Phenotypes of Vitiligo Patients
| Parameter | rs755622 | OR (95% CI) | rs3747517 | OR (95% CI) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| G | C | T | C | |||||||
| Gender | 0.068 | 0.794 | 1.076 (0.619–1.872) | 0.021 | 0.884 | 1.035 (0.653–1.640) | ||||
| Male | 130 | 32 | 102 | 60 | ||||||
| Female | 117 | 31 | 92 | 56 | ||||||
| Age of onset | 0.088 | 0.767 | 1.089 (0.618–1.920) | 4.571 | 0.033 | 1.670 (1.042–2.675) | ||||
| Early | 154 | 38 | 129 | 63 | ||||||
| Late | 93 | 25 | 65 | 53 | ||||||
| Family history | 0.550 | 0.458 | 0.736 (0.327–1.657) | 4.017 | 0.045 | 2.277 (1.001–5.182) | ||||
| Positive | 27 | 9 | 28 | 8 | ||||||
| Negative | 220 | 54 | 166 | 108 | ||||||
| Disease activity | 6.460 | 0.011 | 0.431 (0.222–0.835) | 4.254 | 0.039 | 1.655 (1.024–2.677) | ||||
| Active | 154 | 50 | 136 | 68 | ||||||
| Stable | 93 | 13 | 58 | 48 | ||||||
| Halo nevus | 0.656 | 0.418 | 0.644 (0.221–1.880) | 0.136 | 0.712 | 1.209 (0.441–3.313) | ||||
| Positive | 13 | 5 | 12 | 6 | ||||||
| Negative | 234 | 58 | 182 | 110 | ||||||
Figure 2Serum MIF, IFIH1 and IL6 concentrations in study groups, and serum MIF concentrations according to the genetic model of dominant inheritance. (A) Serum MIF concentrations in study group; (B) serum IFIH1 concentrations in study group; (C) serum IL6 concentrations in study group; (D) genetic model of dominant inheritance by SNP −173G/C MIF genotypes; (E) genetic model of dominant inheritance by SNP H843R IFIH1 genotypes; (F) genetic model of dominant inheritance by SNP −572G/C IL6 genotypes p - value: Mann–Whitney U-test.