| Literature DB >> 34396056 |
Bryan D Steitz1, Lina Sulieman1, Jeremy L Warner1, Daniel Fabbri1, J Thomas Brown1, Alyssa L Davis2, Kim M Unertl1.
Abstract
OBJECTIVE: A growing research literature has highlighted the work of managing and triaging clinical messages as a major contributor to professional exhaustion and burnout. The goal of this study was to discover and quantify the distribution of message content sent among care team members treating patients with breast cancer.Entities:
Keywords: breast cancer; burnout; electronic health records; multidisciplinary communication; workflow
Year: 2021 PMID: 34396056 PMCID: PMC8358477 DOI: 10.1093/jamiaopen/ooab049
Source DB: PubMed Journal: JAMIA Open ISSN: 2574-2531
Classification model metrics
| Classifier | Optimal parameters | Parameter range | Accuracy | Macro-precision | Macro-recall | Micro-F1 | Macro-F1 | AUC |
|---|---|---|---|---|---|---|---|---|
|
Random forest (SD) |
Maximum depth = 100 Maximum features = 2 Number of estimators = 50 Feature selection method = Word2Vec |
1–150 in increments of 2 1–100 in increments of 1 1–200 in increments of 2 BoW, TF-IDF, Word2Vec | 0.59 (0.047) | 0.62 (0.053) | 0.54 (0.053) | 0.61 (0.047) | 0.72 (0.051) | 0.74 (0.029) |
|
Naïve Bayes (SD) |
Alpha = 0.5 Feature selection method = BoW |
0.1–1.5 in increments of 0.1 BoW, TF-IDF, Word2Vec | 0.59 (0.026) | 0.68 (0.049) | 0.61 (0.026) | 0.65 (0.026) | 0.63 (0.032) | 0.78 (0.016) |
|
Support vector machine (SD) |
Penalty = 0.1 Regularization = L2 Tolerance for stopping criteria = 1.3 Feature selection method = Word2Vec |
0.1–5.0 in increments of 0.1 L1, L2 0.1–2.0 in increments of 0.1 BoW, TF-IDF, Word2Vec | 0.61 (0.036) | 0.66 (0.044) | 0.64 (0.039) | 0.68 (0.036) | 0.65 (0.041) | 0.8 (0.023) |
|
BERT base (SD) |
Epochs = 2 Learning rate = 3e−5 Max sequence length = 128 |
1–10 in increments of 1 1e−5, 2e−5, 3e−5, 4e−5, 5e−5 8–256 in increments of 8 | 0.72 (0.023) | 0.7 (0.022) | 0.7 (0.019) | 0.72 (0.023) | 0.7 (0.023) | 0.91 (0.017) |
|
Clinical BERT (SD) |
Epochs = 2 Learning rate = 3e−5 Max sequence length = 128 |
1–10 in increments of 1 1e−5, 2e−5, 3e−5, 4e−5, 5e−5 8–256 in increments of 8 | 0.72 (0.026) | 0.77 (0.030) | 0.65 (0.055) | 0.69 (0.023) | 0.64 (0.026) | 0.89 (0.023) |
| SciBERT |
Epochs = 3 Learning rate = 3e−5 Max sequence length = 128 |
1–10 in increments of 1 1e−5, 2e−5, 3e−5, 4e−5, 5e−5 8–256 in increments of 8 | 0.71 (0.030) | 0.7 (0.031) | 0.69 (0.032) | 0.71 (0.032) | 0.69 (0.022) | 0.90 (0.016) |
AUC: area under the receiver operator curve; BERT: bidirectional encoder representations for transformer; BoW: bag of words; SD: standard deviation; TF-IDF; term frequency-inverse document frequency.
Care team messaging statistics by care team member role
| Administrative staff | Clinical staff | Physician (cancer provider) | Physician (noncancer specialist) | Other | Total | |
|---|---|---|---|---|---|---|
| Number of care team members | 1214 | 1661 | 21 | 972 | 176 | 4044 |
| Number of patients | 3623 | 3675 | 3766 | 2354 | 2236 | 3766 |
| Number of message threads | 25 664 | 34 532 | 10 970 | 11 761 | 2246 | 51 157 |
| Number of sent messages | 48 087 | 65 619 | 15 912 | 16 458 | 2906 | 148 982 |
| Clinical information (%) | 5941 (12.4) | 15 076 (23.0) | 4802 (30.2) | 5956 (36.2) | 710 (24.4) | 32 485 (21.8) |
| Medical logistics (%) | 28 619 (59.5) | 35 340 (53.9) | 8540 (53.7) | 7697 (46.8) | 1597 (55.0) | 81 793 (54.9) |
| Nonmedical logistics (%) | 20 790 (43.2) | 25 743 (39.2) | 3724 (23.4) | 3963 (24.1) | 1170 (40.3) | 55 390 (37.2) |
| Social information (%) | 13 945 (29.0) | 18 613 (28.4) | 7815 (49.1) | 5926 (36.1) | 1139 (39.2) | 47 438 (31.8) |
| Other (%) | 8221 (17.1) | 16 608 (25.3) | 4545 (28.6) | 4448 (27.0) | 439 (15.1) | 34 261 (23.0) |
| Number of received messages | 32 968 | 50 175 | 11 404 | 12 158 | 1735 | 10 8441 |
| Clinical information (%) | 3792 (11.5) | 12 504 (24.9) | 4314 (37.8) | 4707 (38.7) | 409 (23.6) | 25 726 (23.7) |
| Medical logistics (%) | 21 155 (64.2) | 27 376 (54.6) | 7003 (61.4) | 6701 (55.1) | 966 (55.7) | 63 201 (58.3) |
| Nonmedical logistics (%) | 11 855 (36.0) | 21 458 (42.8) | 3633 (31.9) | 4294 (35.3) | 534 (30.8) | 41 774 (38.5) |
| Social information (%) | 12 160 (36.9) | 15 163 (30.2) | 4906 (43.0) | 3738 (30.7) | 691 (39.8) | 36 658 (33.8) |
| Other (%) | 6413 (19.5) | 10 633 (21.2) | 2558 (22.4) | 2843 (23.4) | 430 (24.8) | 22 877 (21.1) |
* Since messages can contain multiple sentences, percentages for sent and received message content will sum to greater than 100%.
Figure 1.UpSet Visualization of Messages Grouped by Classification. The bar graph in the lower left corner depicts sentence-level distribution across each category. Each row in the dot graph represents a classification category; solid dots represent each category part of the intersecting sets. The center bar graph depicts the number of messages in each intersection.
Content of messages exchanged between care team roles
| Administrative staff | Clinical staff | Physician (cancer provider) | Physician (noncancer specialist) | Other | |
|---|---|---|---|---|---|
| Administrative staff | |||||
| Clinical information (%) | 1214 (8.5) | 2357 (20.1) | 427 (16.0) | 451 (23.1) | 233 (14.6) |
| Medical logistics (%) | 7913 (55.1) | 6023 (51.4) | 1189 (44.4) | 814 (41.7) | 700 (43.8) |
| Nonmedical logistics (%) | 5359 (37.3) | 3858 (32.9) | 406 (15.2) | 436 (22.3) | 376 (23.5) |
| Social information (%) | 4077 (28.4) | 2893 (24.7) | 1330 (49.7) | 705 (36.1) | 1023 (64.1) |
| Other (%) | 2707 (18.9) | 3505 (29.9) | 914 (34.1) | 525 (26.9) | 439 (27.5) |
| Total number of messages | 14 359 | 11 727 | 2677 | 1952 | 1597 |
| Clinical staff | |||||
| Clinical information (%) | 755 (7.9) | 3209 (18.2) | 1409 (29.3) | 1837 (32.3) | 1262 (29.2) |
| Medical logistics (%) | 5758 (60.4) | 8382 (47.6) | 2223 (46.2) | 2437 (42.9) | 1824 (42.2) |
| Nonmedical logistics (%) | 2946 (30.9) | 8014 (45.5) | 1011 (21.0) | 1146 (20.2) | 1150 (26.6) |
| Social information (%) | 3015 (31.6) | 4261 (24.2) | 2147 (44.6) | 1699 (29.9) | 2744 (63.4) |
| Other (%) | 1798 (18.9) | 4295 (24.4) | 1367 (28.4) | 1642 (28.9) | 1212 (28.0) |
| Total number of messages | 9535 | 17 625 | 4809 | 5685 | 4327 |
| Physician (cancer provider) | |||||
| Clinical information (%) | 323 (9.5) | 997 (21.0) | 562 (28.0) | 142 (36.1) | 248 (33.7) |
| Medical logistics (%) | 2115 (62.4) | 2544 (53.7) | 910 (45.3) | 173 (44.0) | 331 (45.0) |
| Nonmedical logistics (%) | 871 (25.7) | 1876 (39.6) | 556 (27.7) | 77 (19.6) | 173 (23.5) |
| Social information (%) | 1134 (33.5) | 1566 (33.0) | 897 (44.6) | 198 (50.4) | 452 (61.5) |
| Other (%) | 691 (20.4) | 1326 (28.0) | 672 (33.4) | 97 (24.7) | 192 (26.1) |
| Total number of messages | 3390 | 4741 | 2009 | 393 | 735 |
| Physician (noncancer provider) | |||||
| Clinical information (%) | 203 (7.9) | 1410 (25.1) | 183 (39.6) | 573 (30.6) | 489 (44.8) |
| Medical logistics (%) | 1416 (55.0) | 2778 (49.5) | 185 (40.0) | 722 (38.6) | 448 (41.0) |
| Nonmedical logistics (%) | 1001 (38.9) | 2441 (43.5) | 80 (17.3) | 445 (23.8) | 240 (22.0) |
| Social information (%) | 567 (22.0) | 1341 (23.9) | 251 (54.3) | 523 (28.0) | 766 (70.1) |
| Other (%) | 497 (19.3) | 1489 (26.5) | 160 (34.6) | 820 (43.8) | 347 (31.8) |
| Total number of messages | 2576 | 5614 | 462 | 1871 | 1092 |
| Other | |||||
| Clinical information (%) | 399 (13.3) | 2962 (29.0) | 600 (42.1) | 1076 (48.1) | 209 (30.8) |
| Medical logistics (%) | 1700 (56.5) | 4973 (48.6) | 640 (44.9) | 964 (43.1) | 311 (45.9) |
| Nonmedical logistics (%) | 832 (27.6) | 3168 (31.0) | 283 (19.9) | 591 (26.4) | 210 (31.0) |
| Social information (%) | 1029 (34.2) | 3661 (35.8) | 784 (55.1) | 878 (39.3) | 368 (54.3) |
| Other (%) | 784 (26.0) | 3251 (31.8) | 400 (28.1) | 663 (29.7) | 185 (27.3) |
| Total number of messages | 3011 | 10 227 | 1424 | 2236 | 678 |
Row-wise care team member roles represent the role from which a message was sent. Each column represents the role of provider who received the respective message. The heatmap visualizes the percent of each information type.
Oncology provider messaging statistics by time and clinic activity
| In clinic | Not in clinic | |||||
|---|---|---|---|---|---|---|
| Working hours | After hours | Total | Working hours | After hours | Total | |
| Number of sent messages | 11 136 (93.5%) | 778 (6.5%) | 11 916 | 3633 (90.9%) | 363 (9.1%) | 3996 |
| Clinical information (%) | 3289 (29.5) | 251 (32.3) | 3540 | 1149 (31.6) | 113 (31.1) | 1262 |
| Medical logistics (%) | 6006 (53.9) | 430 (55.3) | 6436 | 1905 (52.4) | 199 (54.8) | 2104 |
| Nonmedical logistics (%) | 2726 (24.5) | 199 (25.6) | 2925 | 729 (20.1) | 70 (19.3) | 799 |
| Social information (%) | 5364 (48.2) | 379 (48.7) | 5743 | 1871 (51.5) | 201 (55.4) | 2072 |
| Other (%) | 3216 (28.9) | 250 (32.1) | 3466 | 985 (27.1) | 94 (25.9) | 1079 |
| Number of received messages | 7891 (94.4%) | 471 (5.6%) | 8362 | 2790 (91.7%) | 252 (8.3%) | 3042 |
| Clinical information (%) | 1167 (14.8) | 97 (20.6) | 3050 | 1088 (39.0) | 176 (69.8) | 1264 |
| Medical logistics (%) | 4791 (60.7) | 294 (62.4) | 5085 | 1771 (63.5) | 147 (58.3) | 1918 |
| Nonmedical logistics (%) | 2482 (31.5) | 165 (35.0) | 2647 | 896 (32.1) | 90 (35.7) | 986 |
| Social information (%) | 3398 (43.1) | 195 (41.4) | 3593 | 1193 (42.8) | 120 (47.6) | 1313 |
| Other (%) | 1728 (21.9) | 102 (21.7) | 1830 | 671 (24.1) | 57 (22.6) | 728 |
* Since messages can contain multiple sentences, percentages for sent and received message content will sum to greater than 100%.