Literature DB >> 34383889

Household Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in the United States: Living Density, Viral Load, and Disproportionate Impact on Communities of Color.

Carla Cerami1,2, Zachary R Popkin-Hall1, Tyler Rapp1, Kathleen Tompkins1, Haoming Zhang3, Meredith S Muller1, Christopher Basham1, Maureen Whittelsey1, Srijana B Chhetri1, Judy Smith1, Christy Litel1, Kelly D Lin1, Mehal Churiwal1, Salman Khan4, Rebecca Rubinstein3, Faith Claman1, Katie Mollan3, David Wohl1, Lakshmanane Premkumar4, Kimberly A Powers3, Jonathan J Juliano1, Feng-Chang Lin3, Jessica T Lin1.   

Abstract

BACKGROUND: Households are hot spots for severe acute respiratory syndrome coronavirus 2 transmission.
METHODS: This prospective study enrolled 100 coronavirus disease 2019 (COVID-19) cases and 208 of their household members in North Carolina though October 2020, including 44% who identified as Hispanic or non-White. Households were enrolled a median of 6 days from symptom onset in the index case. Incident secondary cases within the household were detected using quantitative polymerase chain reaction of weekly nasal swabs (days 7, 14, 21) or by seroconversion at day 28.
RESULTS: Excluding 73 household contacts who were PCR-positive at baseline, the secondary attack rate (SAR) among household contacts was 32% (33 of 103; 95% confidence interval [CI], 22%-44%). The majority of cases occurred by day 7, with later cases confirmed as household-acquired by viral sequencing. Infected persons in the same household had similar nasopharyngeal viral loads (intraclass correlation coefficient = 0.45; 95% CI, .23-.62). Households with secondary transmission had index cases with a median viral load that was 1.4 log10 higher than those without transmission (P = .03), as well as higher living density (more than 3 persons occupying fewer than 6 rooms; odds ratio, 3.3; 95% CI, 1.02-10.9). Minority households were more likely to experience high living density and had a higher risk of incident infection than did White households (SAR, 51% vs 19%; P = .01).
CONCLUSIONS: Household crowding in the context of high-inoculum infections may amplify the spread of COVID-19, potentially contributing to disproportionate impact on communities of color.
© The Author(s) 2021. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  SARS-CoV-2; household transmission; living density; secondary attack rate; viral load

Mesh:

Year:  2022        PMID: 34383889      PMCID: PMC8436395          DOI: 10.1093/cid/ciab701

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   20.999


Households are hot spots for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission [1]. Person-to-person transmission is difficult to control in shared living spaces. For those who isolate at home with young children in small living spaces, following guidelines to physically distance and use separate sleeping, eating, and lavatory facilities is difficult [2]. Because the period of peak infectiousness starts prior to the onset of symptoms, spread can occur before these measures are taken [3-5]. Meta-analyses of the secondary household attack rate (SAR) in the first 6 months of the pandemic ranged from 15% to 20% [6, 7], but these analyses incorporated both retrospective and prospective analyses [6, 7]. Prospective testing of household contacts (HCs) regardless of symptom status is required to capture all secondary cases. Previously identified risk factors associated with increased transmission include the presence of symptoms [6-8] and high viral load in the index case [9]. Among HCs, spouses and those aged >18 years (ie, adults compared with children) are more likely to acquire infection [6, 7, 10]. Measuring secondary household attack rates in vulnerable communities and identifying risk factors for transmission in these communities are critical. The University of North Carolina (UNC) COVID-19 Household Transmission Study (CO-HOST) is the largest, single-site, observational, household cohort in the United States to date and the most ethnically and racially diverse. Weekly sampling for quantitative viral loads combined with SARS-CoV-2 antibody testing at baseline and at 1 month provided an extended period to evaluate transmission. Our objective in this study was to measure the incident SAR in a setting where infected individuals were asked to quarantine at home and given standard guidance. Household and individual demographics as well as daily symptoms and weekly viral loads were collected to identify risk factors and timing of household transmission.

METHODS

Study Design and Enrollment

In the CO-HOST study, we evaluated SARS-CoV-2 acquisition among persons undergoing quarantine in their home after a care-seeking household member (the index case) tested positive for SARS-CoV-2. Recruitment occurred between April 2020 and October 2020, prior to the introduction of SARS-CoV-2 vaccines in the United States. Inclusion criteria for the index cases were age >18 years with a positive qualitative nasopharyngeal (NP) swab for SARS-CoV-2 RNA using polymerase chain reaction (PCR) performed at the UNC hospital clinical laboratory, willingness to self-isolate at home for a 14-day period, living with at least 1 HC who was also willing to participate, and living within driving distance (<1 hour) from the study site. Inclusion criteria for HCs of index patients included age >1 year and currently living in the same home as the index case without plans to live elsewhere during the 28-day study. All participants (or their parents/guardians) gave written, informed consent. Minors aged >7 years provided assent. As shown in Supplementary Figure 1, all households were visited on day 1 by the study team. NP and nasal midturbinate (NMT) swabs were collected for SARS-CoV-2 PCR testing, and blood samples were collected for serology. All study participants received instruction on self-collection of NMT swabs and completed baseline questionnaires that included basic demographic and household information, abbreviated medical history, symptoms, recent travel history, and exposure to confirmed cases of coronavirus disease 2019 (COVID-19). All participants received a daily symptom questionnaire via email until no symptoms were reported for 2 consecutive days. HCs who remained asymptomatic received the questionnaire for 21 days to monitor for new symptoms. On days 7, 14, and 21, a study staff member conducted home visits to collect self-collected NMT swabs. At the final study visit (day 28), participants were asked about COVID-19–related care-seeking and underwent serologic testing.

Laboratory Analyses

Details for all laboratory methods are found in the Supplementary Materials. Quantitative PCR testing for SARS-CoV-2 was performed using a Centers for Disease Control and Prevention reverse-transcription quantitative-PCR protocol authorized by the US Food and Drug Administration for emergency use, as previously described [11]. Serology was performed using enzyme-linked immunoassay (ELISA) that detects antibodies to the receptor binding domain of the spike protein with high sensitivity and specificity [12]. When ELISA results were not available (ie, in children who did not undergo venipuncture), results from a BioMedomics COVID-19 immunoglobulin (Ig) M/IgG Rapid Test [13-15] were used. To determine the prevalence of the 614G variant, which predominated in North Carolina at the time of the study, in our study samples, we developed a real-time PCR assay to target a 107 bp region encompassing the D614G mutation in the S1 segment of the SARS-CoV-2 spike protein. To determine whether secondary cases were acquired outside the household rather than due to household transmission, we performed high-density amplicon sequencing on NP/NMT swab samples from households with late secondary cases to assign SARS-CoV-2 clades and determine the genetic relatedness of viral isolates within and between households.

Statistical Analyses

We summarized baseline demographic characteristics and underlying conditions of index cases and HCs, as well as their household demographics. We determined if baseline NP SARS-CoV-2 viral loads were correlated within households by the intraclass correlation coefficient (ICC), which compares within vs between household variation. We evaluated the secondary household attack rate among household members of persons who tested positive for SARS-CoV-2. For each household, if multiple participants were positive at enrollment, the index case was defined as the person with the earliest onset of infection based on reported onset of symptoms and known date(s) of PCR test positivity. If this was ambiguous, baseline antibody positivity was used as evidence of less recent infection. We calculated the SAR as the risk of incident infection among HCs, defined as the proportion of contacts who were PCR-negative at baseline but then developed SARS-CoV-2 infection during the 28-day study follow-up, confirmed by either PCR or antibody seroconversion. Those with evidence of prior infection (antibody-positive and PCR-negative) or HCs who reported the same COVID-19 exposure outside the household as the index case were excluded from the analysis. To avoid misclassification of asymptomatic infection, HCs who tested PCR-negative by weekly nasal swabs (days 7, 14, and 21) but without day 28 antibody results were also excluded. A 95% confidence interval (CI) for the SAR was calculated using a robust variance estimation for the intercept term in a logistic regression model to account for outcome dependence within a household. Potential risk factors for secondary transmission within the household, including characteristics of index cases, households, and HCs, were examined. These risk factors and details of symptom severity evaluation are described in the Supplementary Materials. Statistical significance was tested using either the Fisher exact test or χ2 test for categorical variables and the Mann-Whitney test for continuous variables. To determine if the association between index race-ethnicity and SAR was related to housing density or viral load (which were correlated with race-ethnicity and/or transmission in unadjusted analyses), we calculated the odds ratio of the race-ethnicity–specific SAR, with the 95% CI estimated using the same robust variance estimation described above, then added the other risk factors as covariates in the logistic regression model to calculate adjusted odds ratios. Analyses were performed using R 4.0.2 (R Core Team, Vienna, Austria). All hypothesis tests were 2-sided at a significance level of 0.05 with no adjustments for multiple comparisons. The University of North Carolina Institutional Review Board approved the study.

RESULTS

Study Enrollment

Between April 2020 and October 2020, the UNC CO-HOST study enrolled 102 households across the central Piedmont Region of North Carolina (Supplementary Figure 2). After excluding participants who did not complete follow-up, had evidence of prior infection, or those who were possibly infected at the same time as the index case based on a common exposure, 91 households were included in the baseline analysis (Figure 1). Households were enrolled a median of 6 days (interquartile range [IQR], 4–7) after symptom onset of the designated index case, which was reassigned in 11 households. Baseline characteristics of the 91 index cases and 176 HCs are listed in Table 1. The median index case age was 37 years (IQR, 23–49), while the age of HCs ranged from 2 to 77 years with 34% aged <18 years. Overall, 44% of participants identified as other than White, non-Hispanic race-ethnicity, and 33% of adults were obese (body mass index >30 kg/m2; Table 1, other comorbidities in Supplementary Table 1).
Figure 1.

COVID-19 Household Transmission Study enrollment and SAR. Among 100 households that completed the 28-day follow-up, household contacts were excluded if they had evidence of prior infection (negative PCR and positive antibody test at enrollment), were possibly infected at the same time as the index case based on a common exposure event, or negative PCR testing could not be confirmed with a negative antibody test at day 28. Of the remaining 176 household contacts of 91 index cases, 41% (73) were already PCR-positive at baseline and thus excluded from the primary SAR analysis. During study follow-up, 33 incident severe acute respiratory syndrome coronavirus 2 cases were identified, yielding a SAR of 32% (33 of 103). Among the 33 secondary cases, 22 were identified by both PCR and seroconversion from day 1 to day 28, 4 were identified by PCR only, and 7 were identified based on seroconversion. Abbreviations: Ab+, antibody positive; D, day; PCR, polymerase chain reaction; SAR, secondary household attack rate.

Table 1.

Demographics of Study Participants

CharacteristicIndex Cases, n (%)Household Contacts, n (%)
91176
Male 43(47)87(49)
Female48(53)89(51)
Race/Ethnicity
 White, non-Hispanic52(57)96(55)
 Non-White39(43)77(44)
  Black or African American10(11)17(9.7)
  Hispanic/Latinx26(29)58(33)
  Other, non-Hispanic3(3.3)2(1.1)
 Unknown0(0.0)3(1.7)
Spanish speaking
 Yes13(14)28(16)
 No78(86)148(84)
Age, years
 0–122(2.2)38(22)
 13–176(6.6)22(13)
 18–2420(22)23(13)
 25–4941(45)56(32)
 50–6418(20)27(15)
 >654(4.4)10(5.7)
Education (excluding those aged <18 years)
 Total responses for adults aged >18 years80113
  High school or lower36(45)54(48)
  College degree23(29)34(30)
  Graduate degree21(26)25(22)
Occupation (excluding those aged <18 years)
 Total responses for adults aged >18 years83116
  Education3(3.6)6(5.2)
  Healthcare worker11(13)9(7.8)
  Retail/Hospitality/Other frontline worker19(23)22(19)
  Student7(8.4)12(10)
  White collar worker23(28)34(29)
  Other (trade and arts)6(7.2)6(5.2)
  Not working outside the home14(17)27(23)
Comorbidities (excluding those aged <18 years)
 Diabetes4(4.8)9(7.8)
 High blood pressure12(15)24(21)
 Body mass index, kg/m2
  >3028(34)38(33)
 25–29.924(29)31(27)
  >30 and 1 or more comorbidity
  Adults aged >18 years (n = 83 index, 116 HC)16(19)22(19)
  Adults aged >50 years (n = 22 index, 37 HC)7(32)12(32)

Abbreviation: HC, household contact.

Demographics of Study Participants Abbreviation: HC, household contact. COVID-19 Household Transmission Study enrollment and SAR. Among 100 households that completed the 28-day follow-up, household contacts were excluded if they had evidence of prior infection (negative PCR and positive antibody test at enrollment), were possibly infected at the same time as the index case based on a common exposure event, or negative PCR testing could not be confirmed with a negative antibody test at day 28. Of the remaining 176 household contacts of 91 index cases, 41% (73) were already PCR-positive at baseline and thus excluded from the primary SAR analysis. During study follow-up, 33 incident severe acute respiratory syndrome coronavirus 2 cases were identified, yielding a SAR of 32% (33 of 103). Among the 33 secondary cases, 22 were identified by both PCR and seroconversion from day 1 to day 28, 4 were identified by PCR only, and 7 were identified based on seroconversion. Abbreviations: Ab+, antibody positive; D, day; PCR, polymerase chain reaction; SAR, secondary household attack rate.

Household Characteristics

The median size of households was 4 persons (Supplementary Table 2). However, in 38% of households, at least 1 household member chose not to participate. Households with a non-White index case were more likely to live in a home less than 2000 square feet in size (71% vs 43%, P = .01). This led to a higher “living density” for non-White households: 43% had more than 3 household members living in a home with fewer than 6 rooms compared with 8% of White households (P < .001). SARS-CoV-2 viral burden was correlated within households (Figure 2). When comparing the baseline NP viral load within vs between households, viral burden showed significant clustering within households (ICC = 0.45; 95%, CI 0.23–0.62; P < .001). Differences in viral load are not attributable to D614G mutation in the viral spike protein that has been associated with increased viral load and infectivity [16], as 90 of 92 (98%) of genotyped SARS-CoV-2 isolates contained the 614G mutant, while only 2 of 92 were wild type at this locus.
Figure 2.

Severe acute respiratory syndrome coronavirus 2 viral burden is correlated within families. The viral load obtained at enrollment from nasopharyngeal (NP) swabs in households with multiple COVID-19–positive household members is shown (n = 42 households). Each vertical row in red depicts an individual household, with circles delineating the log viral load of each member within the household. Gray-shaded circles represent values derived from a nasal midturbinate swab if NP sampling was not performed. This was based on a linear regression equation generated from more than 100 study participants with positive viral load from both NP and nasal midturbinate swabs [11]. Households are depicted across the x-axis in order of decreasing viral load. Data drawn from 148 participants. The intraclass correlation coefficient  = 0.45; 95% confidence interval, .23–.62; P value < .001. Abbreviation: COVID-19, coronavirus disease 2019.

Severe acute respiratory syndrome coronavirus 2 viral burden is correlated within families. The viral load obtained at enrollment from nasopharyngeal (NP) swabs in households with multiple COVID-19–positive household members is shown (n = 42 households). Each vertical row in red depicts an individual household, with circles delineating the log viral load of each member within the household. Gray-shaded circles represent values derived from a nasal midturbinate swab if NP sampling was not performed. This was based on a linear regression equation generated from more than 100 study participants with positive viral load from both NP and nasal midturbinate swabs [11]. Households are depicted across the x-axis in order of decreasing viral load. Data drawn from 148 participants. The intraclass correlation coefficient  = 0.45; 95% confidence interval, .23–.62; P value < .001. Abbreviation: COVID-19, coronavirus disease 2019.

Secondary Attack Rate Among Household Contacts

The incident SAR among HCs was 32% (33 of 103; 95% CI, 22%–44%). Among 91 households, 73 of 176 (41%) HCs tested PCR-positive at baseline and were excluded from the primary SAR analysis (Figure 1, Supplementary Table 3 for demographics of baseline infected cases). Among the remaining 103 HCs of 51 index cases, 33 incident SARS-CoV-2 infections were observed during the 28-day study follow-up (SAR = 32%; 33 of 103). Of these 33 secondary cases, 22 were identified by both PCR and seroconversion from day 1 to day 28, 4 were identified by PCR only, and 7 were identified by seroconversion alone. The majority of secondary cases in the household experienced symptoms (27 of 33), while 18% (n = 6) remained asymptomatic. Secondary household transmission occurred early, within the first week following enrollment for the majority of cases (n = 21 of 26 for those identified by PCR; Figure 1). Five cases were detected by PCR after the first week of enrollment, at day 14 or day 21. Four of these late secondary cases occurred in households of 5 or more (including 2 from the same household), which suggests the possibility of sequential transmission within the household. High-density amplicon sequencing of viral isolates from these late secondary cases and others in their household confirmed that 4 of 5 were indeed due to household transmission (1 isolate failed sequencing) and not community-acquired (Figure 3).
Figure 3.

Bayesian phylogeny showing high relatedness within household infections, indicating household transmission. High-density amplicon sequencing was performed on all available viral isolates from 10 households with secondary infections to assess relatedness between infections. Whole-genome sequences were assembled according to the Wuhan reference genome, assigned to major clades, and then used for Bayesian phylogeny reconstruction. Index cases within each numbered household are in bold. Household contacts are numbered sequentially starting with the index case number, eg, X-1, X-2. Minors are indicated with the letter “c” prior to the case number. Each asterisk indicates 1 study week preceding a positive quantitative polymerase chain reaction (PCR) test, ie, * indicating a D7 positive test, ** indicating a D14 positive test, and *** indicating a D21 positive test. Household contacts without asterisks were PCR-positive at baseline. Abbreviation: SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.

Bayesian phylogeny showing high relatedness within household infections, indicating household transmission. High-density amplicon sequencing was performed on all available viral isolates from 10 households with secondary infections to assess relatedness between infections. Whole-genome sequences were assembled according to the Wuhan reference genome, assigned to major clades, and then used for Bayesian phylogeny reconstruction. Index cases within each numbered household are in bold. Household contacts are numbered sequentially starting with the index case number, eg, X-1, X-2. Minors are indicated with the letter “c” prior to the case number. Each asterisk indicates 1 study week preceding a positive quantitative polymerase chain reaction (PCR) test, ie, * indicating a D7 positive test, ** indicating a D14 positive test, and *** indicating a D21 positive test. Household contacts without asterisks were PCR-positive at baseline. Abbreviation: SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.

Risk Factors for Household Transmission

At the household level, 44% of households (40 of 91) had at least 1 infected household member at enrollment in addition to the index case, rising to 69% (63 of 91) of households 1 month later. Sixty households contained susceptible HCs at enrollment and were thus included in the risk factor analysis. Secondary transmission in the household was associated with a higher NP viral load in index cases at enrollment. The median NP viral load among index cases was 1.4 log10 higher in households with secondary cases detected during the study vs those with no incident cases in the household (P = .03; Table 2). This difference persisted when the analysis was restricted to index cases who were still antibody-negative and thus more recently infected [16, 18] (Figure 4). Symptom severity was not associated with household transmission, though secondary transmission did occur in households of the 4 index cases who were hospitalized (Table 2).
Table 2.

Potential Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission From Index Cases

Index Cases All Indexes, n (%)Household Transmission, n (%)No Transmission, n (%) P Value
60 (100)32 (53)28 (47)
Age, years
 <187 (12)4 (13)3 (11)NS
 18–5045 (75)25 (78)20 (71)
 >508 (13)3 (9)5 (18)
Sex
 Female33 (55)15 (47)18 (64)NS
 Male27 (45)17 (53)10 (36)
Mask wearing at home prior to enrollment (missing n = 3)10 (18)4 (13)6 (22)NS
Race-Ethnicity
 White, non-Hispanic34 (57)13 (41)21 (75).01a
 Black or African American7 (12)5 (16)2 (7)
 Other, non-Hispanic4 (7)4 (12)0 (0)
 Hispanic/Latinx15 (25)10 (31)5 (18)
Symptom severity
 Mild12 (21)4 (14)8 (29).07
 Moderate/Severe41 (72)21 (72)20 (71)
 Hospitalized4 (7)4 (14)0 (0)
Duration of symptoms at enrollment, median (IQR), days5 (4–7)5 (4–7)6 (4–7)NS
Nasopharyngeal viral load (log10 copies/mL) at enrollment (missing n = 6), median (IQR)8.3 (5.9–9.5)8.8 (7.3–10.1)7.4 (5.3–8.7).03
Comorbidities for adults aged >18 years (missing n = 1 for diabetes, n = 3 for obesity)
 Diabetes0 (0)0 (0)0 (0)NS
 Obesity, body mass index >30 kg/m221 (42)13 (50)8 (33)NS
Education for adults aged >18 years (missing n = 3)
 High school or less21 (42)13 (52)8 (32)NS
 College degree17 (34)9 (36)8 (32)
 Graduate degree12 (24)3 (12)9 (36)

P values only reported if ≤ .10, otherwise noted as NS.

Abbreviations: IQR, interquartile range; NS, not significant.

aCompares White, non-Hispanic vs all other categories.

Figure 4.

Association of index NP viral load and transmission in the household. Households with secondary cases were more likely to have index cases with high NP viral load compared with households without secondary transmission (median NP viral load log 8.8 vs 7.4 copies/mL, respectively; P = .03). Index cases who were not yet antibody-positive at enrollment, as a marker of more recent infection, are depicted to the right in gray. Abbreviations: Ab+, antibody positive; NP, nasopharyngeal.

Potential Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission From Index Cases P values only reported if ≤ .10, otherwise noted as NS. Abbreviations: IQR, interquartile range; NS, not significant. aCompares White, non-Hispanic vs all other categories. Association of index NP viral load and transmission in the household. Households with secondary cases were more likely to have index cases with high NP viral load compared with households without secondary transmission (median NP viral load log 8.8 vs 7.4 copies/mL, respectively; P = .03). Index cases who were not yet antibody-positive at enrollment, as a marker of more recent infection, are depicted to the right in gray. Abbreviations: Ab+, antibody positive; NP, nasopharyngeal. Households with non-White index cases were more likely to experience incident transmission in the household (Table 2), despite there being no difference in index case viral loads by race-ethnicity (median NP viral load for White vs non-White: 8.3 vs 8.3 log10 copies/mL). This corresponds to a SAR of 51% (95% CI, 33%–69%) in households with a non-White or Hispanic index case compared with 19% (95% CI, 10%–35%) in White, non-Hispanic households (P = .008). Higher living density, defined as more than 3 household members living in a home with fewer than 6 rooms, was associated with a greater odds of transmission (OR, 3.3; 95% CI, 1.02–10.9; P = .047; Table 3); a greater proportion of non-White/Hispanic households met this definition of high living density (42%, 11 of 26) compared with White, non-Hispanic households (12%, 4 of 34; P = .01). However, after adjusting for viral load and living density, Hispanic/non-White race-ethnicity remained associated with secondary household transmission (Table 4).
Table 3.

Potential Household-Level Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission

HouseholdsAll Households, n (%)Infected, n (%)Uninfected, n (%) P Value
60 (100)32 (53)28 (47)-
Household size, mean3.84.23.4.03
Living space (missing n = 3), sq ft
 <2000 29 (51)18 (60)11 (41)NS
 >2000 28 (49)12 (40)16 (59)
Number of roomsa
 2 or fewer 5 (8)2 (6)3 (10).06
 3–5 27 (45)19 (59)8 (29)
 6 or more 28 (47)11 (34)17 (61)
More than 3 people and fewer than 6 rooms15 (25)13 (41)2 (7).003
Home ownership (missing n = 1)
 Renting apartment4 (7)2 (7)2 (7)NS
 Renting home17 (29)11 (36)6 (21)
 Own home38 (64)18 (58)20 (71)

P values only reported if ≤ .10, otherwise noted as NS.

Abbreviation: NS, not significant.

aNumber of rooms includes bedrooms, kitchen, and common rooms but not bathrooms or garage.

Table 4.

Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission in the Household

Index or Household Risk FactorSusceptible Household ContactsIncident Secondary CasesSecondary Household Attack Rate (95% CI)Odds Ratio (95% CI)Adjusted Odds Ratio (95% CI)
Non-White412151% (33–69)4.4 (1.5–13.0)4.8 (1.5–15.4)
White, non-Hispanic621219% (10–35)-
Higher index nasopharyngeal viral loada---3.5 (1.5–8.1)3.6 (1.5–8.5)
High living densityb291552% (27–75)3.3 (1.02–10.9)1.4 (.4–4.6)
Not high living density741824% (15–37)-

Adjusted odds ratio adjusts for viral load as a continuous variable and race-ethnicity and living density as dichotomous variables.

Abbreviation: CI, confidence interval.

aOdds ratio for 3 log10 increase in the index viral load (VL). For example, the odds of transmission in a household where the index VL is 1 × 109 copies/mL is 3.5 times greater than in a household where the index VL is 1 × 106 copies/mL.

bDefined as more than 3 people occupying fewer than 6 rooms.

Potential Household-Level Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission P values only reported if ≤ .10, otherwise noted as NS. Abbreviation: NS, not significant. aNumber of rooms includes bedrooms, kitchen, and common rooms but not bathrooms or garage. Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 Transmission in the Household Adjusted odds ratio adjusts for viral load as a continuous variable and race-ethnicity and living density as dichotomous variables. Abbreviation: CI, confidence interval. aOdds ratio for 3 log10 increase in the index viral load (VL). For example, the odds of transmission in a household where the index VL is 1 × 109 copies/mL is 3.5 times greater than in a household where the index VL is 1 × 106 copies/mL. bDefined as more than 3 people occupying fewer than 6 rooms. Among susceptible HCs, those who shared a bathroom with the index case were at higher risk of acquiring infection (Supplementary Table 4). Obesity and being female were also associated with a higher risk of incident infection, though these associations were not statistically significant. Though a slightly greater percentage of participants in households without secondary transmission reported wearing a mask at home in the week prior to enrollment (22% vs 13% for index cases and 30% vs 20% in HCs), these differences were not statistically significant.

Discussion

Household transmission is one of the main drivers of the SARS-CoV-2 pandemic. By incorporating timely recruitment of index cases, prospective sampling to 21 days regardless of symptom status, and confirmatory viral sequencing in a subset of households, we show that household transmission occurs in a substantial proportion of COVID-19–positive households, with racial-ethnic disparities in secondary attack rates and higher risk of infection in more crowded households. Our data also suggest that those infected with a high viral load are not only more likely to transmit virus to other household members but they may seed other high viral load infections, putting the entire household at higher risk for more severe illness. The incident SAR in this study was 32%, rising to 51% in minority households. While a meta-analysis of household transmission studies conducted in the first 6 months of the pandemic (prior to circulation of new variants) found a much lower overall household SAR of 17% (95% CI, 14%–19%), it noted significant heterogeneity between studies (ranging from 4% to 45%) and combined both retrospective studies based on contact tracing data and prospective analyses [6]. As expected, prospective studies with increased frequency of testing regardless of symptom status generally show higher infection rates [7]. In the United States, a retrospective study in New York that included household testing offered regardless of symptom status reported a SAR of 38% [17], while 2 prospective studies following households in Utah and Wisconsin (58 households, SAR 29%) [18] and Tennessee and Wisconsin (101 households, SAR 53%) [10] also reported higher SARs. Altogether, these studies document high secondary household attack rates within US households. To our knowledge, this is the first study to show increased transmission in non-White US households. Though they experience similar case fatality rates, African American/Black and Hispanic populations in the United States experience disproportionately higher rates of SARS-CoV-2 infection [19-21]. These racial disparities are likely due to differences in healthcare access and exposure risk that are driven by systemic societal inequities rather than individual biological or behavioral characteristics [22-25]. Our limited findings are consistent with this explanation. While the sample size precluded full investigation of drivers of increased transmission in minority households, we found that high living density/household crowding was more common in non-White households, while viral load and reported masking in the home did not differ by race-ethnicity. We also found that SARS-CoV-2 viral burden was correlated within households. Increased viral load increases infectivity in vivo [26]. A study of 282 clusters in Spain showed an increased risk of transmission with shorter time to onset of symptoms among contacts as viral load of the index cases increased [9]. Since greater viral burden (high viral load or lower cycle threshold values by PCR) is associated with disease severity [27-30], our findings imply that when a person is hospitalized, others in the same household may be at a higher risk for a similar outcome than would be predicted based on their individual risk factors alone. An inoculum effect may underlie this finding [31] and also explain why secondary cases in households appear to be overdispersed, with either most or all members infected, or none at all [6, 32, 33]. This study has several limitations. First, although we enrolled most households within 24 to 48 hours of a positive SARS-CoV-2 test result, delays in testing meant that it was common for others in the household to be PCR-positive at enrollment. While 33 HCs met our end point as incident SARS-CoV-2 cases, 73 HCs were infected at study baseline and hence could not be categorized definitively as due to household transmission and were excluded from the analysis. Thus, we likely underestimated the true SAR, and the resultant small sample size was not sufficient to investigate all drivers of household transmission. We were similarly limited in our ability to do adjusted analyses beyond a simplistic exploration of whether living density might account for the observed racial disparity in SAR. In the households with multiple infected household members at baseline, we cannot be certain that the designated index case was the source of infection for all infected household members. This may have affected our evaluation of index case risk factors associated with transmission. Additionally, we were unable to adequately assess the effects of age, mask-wearing, and the presence of symptoms on transmission. We recruited adult index cases, and in 38% of households, at least 1 household member (most often young children) declined to participate. While mask use was queried, mask use prior to any COVID-19 diagnosis in the household was not specifically elicited. All index cases except 1 were tested because they were symptomatic. In conclusion, SARS-CoV-2 transmits early and often among household members. While masking, physical distancing, and quarantining the whole household may reduce or prevent transmission beyond the household, these strategies are less effective within the household, especially in the setting of high viral load infections and crowded living spaces. Frequent point-of-care testing and post-exposure prophylaxis in those at risk for severe illness [34] and ultimately widespread and equitable distribution of vaccines [35] are needed to lessen the impact of COVID-19 within households and vulnerable communities.

Supplementary Data

Supplementary materials are available at Clinical Infectious Diseases online. Consisting of data provided by the authors to benefit the reader, the posted materials are not copyedited and are the sole responsibility of the authors, so questions or comments should be addressed to the corresponding author. Click here for additional data file.
  30 in total

1.  Impact of Severe Acute Respiratory Syndrome Coronavirus 2 Viral Load on Risk of Intubation and Mortality Among Hospitalized Patients With Coronavirus Disease 2019.

Authors:  Reed Magleby; Lars F Westblade; Alex Trzebucki; Matthew S Simon; Mangala Rajan; Joel Park; Parag Goyal; Monika M Safford; Michael J Satlin
Journal:  Clin Infect Dis       Date:  2021-12-06       Impact factor: 9.079

2.  COVID-19 Testing, Epidemic Features, Hospital Outcomes, and Household Prevalence, New York State-March 2020.

Authors:  Eli S Rosenberg; Elizabeth M Dufort; Debra S Blog; Eric W Hall; Dina Hoefer; Bryon P Backenson; Alison T Muse; James N Kirkwood; Kirsten St George; David R Holtgrave; Brad J Hutton; Howard A Zucker
Journal:  Clin Infect Dis       Date:  2020-11-05       Impact factor: 9.079

3.  Household Transmission of SARS-CoV-2 in the United States.

Authors:  Nathaniel M Lewis; Victoria T Chu; Dongni Ye; Erin E Conners; Radhika Gharpure; Rebecca L Laws; Hannah E Reses; Brandi D Freeman; Mark Fajans; Elizabeth M Rabold; Patrick Dawson; Sean Buono; Sherry Yin; Daniel Owusu; Ashutosh Wadhwa; Mary Pomeroy; Anna Yousaf; Eric Pevzner; Henry Njuguna; Katherine A Battey; Cuc H Tran; Victoria L Fields; Phillip Salvatore; Michelle O'Hegarty; Jeni Vuong; Rebecca Chancey; Christopher Gregory; Michelle Banks; Jared R Rispens; Elizabeth Dietrich; Perrine Marcenac; Almea M Matanock; Lindsey Duca; Allison Binder; Garrett Fox; Sandra Lester; Lisa Mills; Susan I Gerber; John Watson; Amy Schumacher; Lucia Pawloski; Natalie J Thornburg; Aron J Hall; Tair Kiphibane; Sarah Willardson; Kim Christensen; Lindsey Page; Sanjib Bhattacharyya; Trivikram Dasu; Ann Christiansen; Ian W Pray; Ryan P Westergaard; Angela C Dunn; Jacqueline E Tate; Scott A Nabity; Hannah L Kirking
Journal:  Clin Infect Dis       Date:  2020-08-16       Impact factor: 9.079

4.  Association of Social and Demographic Factors With COVID-19 Incidence and Death Rates in the US.

Authors:  Monita Karmakar; Paula M Lantz; Renuka Tipirneni
Journal:  JAMA Netw Open       Date:  2021-01-04

5.  Racial and Ethnic Disparities in COVID-19-Related Infections, Hospitalizations, and Deaths : A Systematic Review.

Authors:  Katherine Mackey; Chelsea K Ayers; Karli K Kondo; Somnath Saha; Shailesh M Advani; Sarah Young; Hunter Spencer; Max Rusek; Johanna Anderson; Stephanie Veazie; Mia Smith; Devan Kansagara
Journal:  Ann Intern Med       Date:  2020-12-01       Impact factor: 25.391

6.  Characteristics associated with household transmission of SARS-CoV-2 in Ontario, Canada: A cohort study.

Authors:  Lauren A Paul; Nick Daneman; Kevin A Brown; James Johnson; Trevor van Ingen; Eugene Joh; Sarah E Wilson; Sarah A Buchan
Journal:  Clin Infect Dis       Date:  2021-03-05       Impact factor: 9.079

7.  SARS-CoV-2 testing in North Carolina: Racial, ethnic, and geographic disparities.

Authors:  Katerina Brandt; Varun Goel; Corinna Keeler; Griffin J Bell; Allison E Aiello; Giselle Corbie-Smith; Erica Wilson; Aaron Fleischauer; Michael Emch; Ross M Boyce
Journal:  Health Place       Date:  2021-04-19       Impact factor: 4.078

8.  Effect of Vaccination on Household Transmission of SARS-CoV-2 in England.

Authors:  Ross J Harris; Jennifer A Hall; Asad Zaidi; Nick J Andrews; J Kevin Dunbar; Gavin Dabrera
Journal:  N Engl J Med       Date:  2021-06-23       Impact factor: 91.245

9.  SARS-CoV-2 viral load is associated with increased disease severity and mortality.

Authors:  Jesse Fajnzylber; James Regan; Kendyll Coxen; Heather Corry; Colline Wong; Alexandra Rosenthal; Daniel Worrall; Francoise Giguel; Alicja Piechocka-Trocha; Caroline Atyeo; Stephanie Fischinger; Andrew Chan; Keith T Flaherty; Kathryn Hall; Michael Dougan; Edward T Ryan; Elizabeth Gillespie; Rida Chishti; Yijia Li; Nikolaus Jilg; Dusan Hanidziar; Rebecca M Baron; Lindsey Baden; Athe M Tsibris; Katrina A Armstrong; Daniel R Kuritzkes; Galit Alter; Bruce D Walker; Xu Yu; Jonathan Z Li
Journal:  Nat Commun       Date:  2020-10-30       Impact factor: 14.919

10.  Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.

Authors:  Bette Korber; Will M Fischer; Sandrasegaram Gnanakaran; Hyejin Yoon; James Theiler; Werner Abfalterer; Nick Hengartner; Elena E Giorgi; Tanmoy Bhattacharya; Brian Foley; Kathryn M Hastie; Matthew D Parker; David G Partridge; Cariad M Evans; Timothy M Freeman; Thushan I de Silva; Charlene McDanal; Lautaro G Perez; Haili Tang; Alex Moon-Walker; Sean P Whelan; Celia C LaBranche; Erica O Saphire; David C Montefiori
Journal:  Cell       Date:  2020-07-03       Impact factor: 66.850

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  18 in total

1.  Household Transmission of SARS-CoV-2 in Bhutan.

Authors:  Jimba Jatsho; Dorji Pelzom; Sithar Dorji; Thinley Pelzang
Journal:  Biomed Res Int       Date:  2022-07-08       Impact factor: 3.246

2.  Factors Associated With Household Transmission of SARS-CoV-2: An Updated Systematic Review and Meta-analysis.

Authors:  Zachary J Madewell; Yang Yang; Ira M Longini; M Elizabeth Halloran; Natalie E Dean
Journal:  JAMA Netw Open       Date:  2021-08-02

3.  Association of race/ethnicity and socioeconomic status with COVID-19 30-day mortality at a Philadelphia medical center using a retrospective cohort study.

Authors:  Dianna R Cheney-Peters; Crystal Y Lee; Shuji Mitsuhashi; Dina S Zaret; Joshua M Riley; Chantel M Venkataraman; Joseph W Schaefer; Brandon J George; Chris J Li; Christa M Smaltz; Conor G Bradley; Danielle M Fitzpatrick; David B Ney; Divya M Chalikonda; Joshua D Mairose; Kashyap Chauhan; Margaret V Szot; Robert B Jones; Rukaiya Bashir-Hamidu; Alan A Kubey
Journal:  J Med Virol       Date:  2021-10-11       Impact factor: 20.693

4.  Precision health diagnostic and surveillance network uses S gene target failure (SGTF) combined with sequencing technologies to track emerging SARS-CoV-2 variants.

Authors:  Rafael Guerrero-Preston; Vanessa Rivera-Amill; Karem Caraballo; Sebastian Rodríguez-Torres; Ana Purcell-Wiltz; Andrea A García; Raphael S Torres; Fernando T Zamuner; Claudio Zanettini; Matthew J MacKay; Rachel Baits; Daisy Salgado; Gaurav Khullar; Jessica Metti; Timothy Baker; Joel Dudley; Keilyn Vale; Gabriela Pérez; Lorena De Jesús; Yaima Miranda; Denise Ortiz; Amanda García-Negrón; Liliana Viera; Alberto Ortiz; Jorge A Canabal; Josefina Romaguera; Ivonne Jiménez-Velázquez; Luigi Marchionni; José F Rodríguez-Orengo; Adriana Baez; Christopher E Mason; David Sidransky
Journal:  Immun Inflamm Dis       Date:  2022-06

5.  Heterogeneity in SARS-CoV-2 Positivity by Ethnicity in Los Angeles.

Authors:  Lao-Tzu Allan-Blitz; Fred Hertlein; Jeffrey D Klausner
Journal:  J Racial Ethn Health Disparities       Date:  2021-05-24

6.  Household transmission of SARS-CoV-2 from unvaccinated asymptomatic and symptomatic household members with confirmed SARS-CoV-2 infection: an antibody-surveillance study.

Authors:  Maala Bhatt; Amy C Plint; Ken Tang; Richard Malley; Anne Pham Huy; Candice McGahern; Jennifer Dawson; Martin Pelchat; Lauren Dawson; Terry Varshney; Corey Arnold; Yannick Galipeau; Michael Austin; Nisha Thampi; Fuad Alnaji; Marc-André Langlois; Roger L Zemek
Journal:  CMAJ Open       Date:  2022-04-12

7.  Assessment of the Field Utility of a Rapid Point-of-Care Test for SARS-CoV-2 Antibodies in a Household Cohort.

Authors:  Mehal Churiwal; Kelly D Lin; Salman Khan; Srijana Chhetri; Meredith S Muller; Kathleen Tompkins; Judy Smith; Christy Litel; Maureen Whittelsey; Christopher Basham; Tyler Rapp; Carla Cerami; Lakshmanane Premkumar; Jessica T Lin
Journal:  Am J Trop Med Hyg       Date:  2021-11-24       Impact factor: 3.707

8.  Incidence of symptomatic COVID-19 in close contacts of patients after discharge from hospital.

Authors:  Ayat Ahmadi; Amirhossein Poopak; Sina Nazemi; Negin Mohammadi; Bita Eslami; Monireh Sadat Seyyedsalehi; Leila Doshmangir; Seyyed Farshad Allameh; Kazem Zendehdel
Journal:  BMC Infect Dis       Date:  2022-03-26       Impact factor: 3.090

9.  SARS-CoV-2 Delta Variant in Jingmen City, Hubei Province, China, 2021: Children Susceptible and Vaccination Breakthrough Infection.

Authors:  Dan Li; Ai-E Li; Zhu-Qing Li; Yu Bao; Tian Liu; Xiang-Rong Qin; Xue-Jie Yu
Journal:  Front Microbiol       Date:  2022-04-13       Impact factor: 6.064

10.  Household secondary attack rates of SARS-CoV-2 by variant and vaccination status: an updated systematic review and meta-analysis.

Authors:  Zachary J Madewell; Yang Yang; Ira M Longini; M Elizabeth Halloran; Natalie E Dean
Journal:  medRxiv       Date:  2022-01-11
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