Literature DB >> 33184236

SARS-CoV-2 D614G variant exhibits efficient replication ex vivo and transmission in vivo.

Yixuan J Hou1, Shiho Chiba2, Peter Halfmann2, Camille Ehre3, Makoto Kuroda2, Kenneth H Dinnon4, Sarah R Leist1, Alexandra Schäfer1, Noriko Nakajima5, Kenta Takahashi5, Rhianna E Lee3, Teresa M Mascenik3, Rachel Graham1, Caitlin E Edwards1, Longping V Tse1, Kenichi Okuda3, Alena J Markmann6, Luther Bartelt6, Aravinda de Silva4, David M Margolis1,4,6, Richard C Boucher3, Scott H Randell3, Tadaki Suzuki5, Lisa E Gralinski1, Yoshihiro Kawaoka7,8, Ralph S Baric9,4.   

Abstract

The spike aspartic acid-614 to glycine (D614G) substitution is prevalent in global severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strains, but its effects on viral pathogenesis and transmissibility remain unclear. We engineered a SARS-CoV-2 variant containing this substitution. The variant exhibits more efficient infection, replication, and competitive fitness in primary human airway epithelial cells but maintains similar morphology and in vitro neutralization properties, compared with the ancestral wild-type virus. Infection of human angiotensin-converting enzyme 2 (ACE2) transgenic mice and Syrian hamsters with both viruses resulted in similar viral titers in respiratory tissues and pulmonary disease. However, the D614G variant transmits significantly faster and displayed increased competitive fitness than the wild-type virus in hamsters. These data show that the D614G substitution enhances SARS-CoV-2 infectivity, competitive fitness, and transmission in primary human cells and animal models.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2020        PMID: 33184236      PMCID: PMC7775736          DOI: 10.1126/science.abe8499

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  27 in total

1.  Molecular evolution of the SARS coronavirus during the course of the SARS epidemic in China.

Authors: 
Journal:  Science       Date:  2004-01-29       Impact factor: 47.728

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Journal:  Nature       Date:  2020-05-18       Impact factor: 49.962

Review 3.  Coronaviruses: an RNA proofreading machine regulates replication fidelity and diversity.

Authors:  Mark R Denison; Rachel L Graham; Eric F Donaldson; Lance D Eckerle; Ralph S Baric
Journal:  RNA Biol       Date:  2011-03-01       Impact factor: 4.652

4.  Human monoclonal antibody combination against SARS coronavirus: synergy and coverage of escape mutants.

Authors:  Jan ter Meulen; Edward N van den Brink; Leo L M Poon; Wilfred E Marissen; Cynthia S W Leung; Freek Cox; Chung Y Cheung; Arjen Q Bakker; Johannes A Bogaards; Els van Deventer; Wolfgang Preiser; Hans Wilhelm Doerr; Vincent T Chow; John de Kruif; Joseph S M Peiris; Jaap Goudsmit
Journal:  PLoS Med       Date:  2006-07       Impact factor: 11.069

5.  Human Adaptation of Ebola Virus during the West African Outbreak.

Authors:  Richard A Urbanowicz; C Patrick McClure; Anavaj Sakuntabhai; Amadou A Sall; Gary Kobinger; Marcel A Müller; Edward C Holmes; Félix A Rey; Etienne Simon-Loriere; Jonathan K Ball
Journal:  Cell       Date:  2016-11-03       Impact factor: 41.582

6.  Syrian hamsters as a small animal model for SARS-CoV-2 infection and countermeasure development.

Authors:  Masaki Imai; Kiyoko Iwatsuki-Horimoto; Masato Hatta; Samantha Loeber; Peter J Halfmann; Noriko Nakajima; Tokiko Watanabe; Michiko Ujie; Kenta Takahashi; Mutsumi Ito; Shinya Yamada; Shufang Fan; Shiho Chiba; Makoto Kuroda; Lizheng Guan; Kosuke Takada; Tammy Armbrust; Aaron Balogh; Yuri Furusawa; Moe Okuda; Hiroshi Ueki; Atsuhiro Yasuhara; Yuko Sakai-Tagawa; Tiago J S Lopes; Maki Kiso; Seiya Yamayoshi; Noriko Kinoshita; Norio Ohmagari; Shin-Ichiro Hattori; Makoto Takeda; Hiroaki Mitsuya; Florian Krammer; Tadaki Suzuki; Yoshihiro Kawaoka
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

7.  A clade of SARS-CoV-2 viruses associated with lower viral loads in patient upper airways.

Authors:  Ramon Lorenzo-Redondo; Hannah H Nam; Scott C Roberts; Lacy M Simons; Lawrence J Jennings; Chao Qi; Chad J Achenbach; Alan R Hauser; Michael G Ison; Judd F Hultquist; Egon A Ozer
Journal:  EBioMedicine       Date:  2020-11-11       Impact factor: 8.143

8.  SARS-CoV-2 Reverse Genetics Reveals a Variable Infection Gradient in the Respiratory Tract.

Authors:  Yixuan J Hou; Kenichi Okuda; Caitlin E Edwards; David R Martinez; Takanori Asakura; Kenneth H Dinnon; Takafumi Kato; Rhianna E Lee; Boyd L Yount; Teresa M Mascenik; Gang Chen; Kenneth N Olivier; Andrew Ghio; Longping V Tse; Sarah R Leist; Lisa E Gralinski; Alexandra Schäfer; Hong Dang; Rodney Gilmore; Satoko Nakano; Ling Sun; M Leslie Fulcher; Alessandra Livraghi-Butrico; Nathan I Nicely; Mark Cameron; Cheryl Cameron; David J Kelvin; Aravinda de Silva; David M Margolis; Alena Markmann; Luther Bartelt; Ross Zumwalt; Fernando J Martinez; Steven P Salvatore; Alain Borczuk; Purushothama R Tata; Vishwaraj Sontake; Adam Kimple; Ilona Jaspers; Wanda K O'Neal; Scott H Randell; Richard C Boucher; Ralph S Baric
Journal:  Cell       Date:  2020-05-27       Impact factor: 41.582

9.  Swine acute diarrhea syndrome coronavirus replication in primary human cells reveals potential susceptibility to infection.

Authors:  Caitlin E Edwards; Boyd L Yount; Rachel L Graham; Sarah R Leist; Yixuan J Hou; Kenneth H Dinnon; Amy C Sims; Jesica Swanstrom; Kendra Gully; Trevor D Scobey; Michelle R Cooley; Caroline G Currie; Scott H Randell; Ralph S Baric
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-12       Impact factor: 11.205

10.  Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.

Authors:  Bette Korber; Will M Fischer; Sandrasegaram Gnanakaran; Hyejin Yoon; James Theiler; Werner Abfalterer; Nick Hengartner; Elena E Giorgi; Tanmoy Bhattacharya; Brian Foley; Kathryn M Hastie; Matthew D Parker; David G Partridge; Cariad M Evans; Timothy M Freeman; Thushan I de Silva; Charlene McDanal; Lautaro G Perez; Haili Tang; Alex Moon-Walker; Sean P Whelan; Celia C LaBranche; Erica O Saphire; David C Montefiori
Journal:  Cell       Date:  2020-07-03       Impact factor: 66.850

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  337 in total

1.  SARS-CoV-2 spike D614G change enhances replication and transmission.

Authors:  Bin Zhou; Tran Thi Nhu Thao; Donata Hoffmann; Adriano Taddeo; Nadine Ebert; Fabien Labroussaa; Anne Pohlmann; Jacqueline King; Silvio Steiner; Jenna N Kelly; Jasmine Portmann; Nico Joel Halwe; Lorenz Ulrich; Bettina Salome Trüeb; Xiaoyu Fan; Bernd Hoffmann; Li Wang; Lisa Thomann; Xudong Lin; Hanspeter Stalder; Berta Pozzi; Simone de Brot; Nannan Jiang; Dan Cui; Jaber Hossain; Malania M Wilson; Matthew W Keller; Thomas J Stark; John R Barnes; Ronald Dijkman; Joerg Jores; Charaf Benarafa; David E Wentworth; Volker Thiel; Martin Beer
Journal:  Nature       Date:  2021-02-26       Impact factor: 49.962

2.  Evolution and Epidemiology of SARS-CoV-2 Virus.

Authors:  Yu-Nong Gong; Kuo-Ming Lee; Shin-Ru Shih
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Vaccine development for emerging infectious diseases.

Authors:  Jean-Louis Excler; Melanie Saville; Seth Berkley; Jerome H Kim
Journal:  Nat Med       Date:  2021-04-12       Impact factor: 53.440

Review 4.  Making sense of spike D614G in SARS-CoV-2 transmission.

Authors:  Aria C Shi; Xuping Xie
Journal:  Sci China Life Sci       Date:  2021-02-04       Impact factor: 6.038

5.  SARS-CoV-2 gene content and COVID-19 mutation impact by comparing 44 Sarbecovirus genomes.

Authors:  Irwin Jungreis; Rachel Sealfon; Manolis Kellis
Journal:  Nat Commun       Date:  2021-05-11       Impact factor: 14.919

6.  Pharmacokinetic-based failure of a detergent virucidal for SARS-COV-2 nasal infections.

Authors:  Charles R Esther; Kyle S Kimura; Yu Mikami; Caitlin E Edwards; Suman R Das; Michael H Freeman; Britton A Strickland; Hunter M Brown; Bronson C Wessinger; Veerain C Gupta; Kate Von Wahlde; Quanhu Sheng; Li Ching Huang; Daniel R Bacon; Adam J Kimple; Agathe S Ceppe; Takafumi Kato; Raymond J Pickles; Scott H Randell; Ralph S Baric; Justin H Turner; Richard C Boucher
Journal:  Res Sq       Date:  2021-05-14

7.  β-d-N4-hydroxycytidine Inhibits SARS-CoV-2 Through Lethal Mutagenesis But Is Also Mutagenic To Mammalian Cells.

Authors:  Shuntai Zhou; Collin S Hill; Sanjay Sarkar; Longping V Tse; Blaide M D Woodburn; Raymond F Schinazi; Timothy P Sheahan; Ralph S Baric; Mark T Heise; Ronald Swanstrom
Journal:  J Infect Dis       Date:  2021-08-02       Impact factor: 5.226

8.  Molecular epidemiology of SARS-CoV-2 isolated from COVID-19 family clusters.

Authors:  Hendra Wibawa; Mohamad Saifudin Hakim; Ika Trisnawati; Riat El Khair; Rina Triasih; Kristy Iskandar; Nungki Anggorowati; Edwin Widyanto Daniwijaya; Endah Supriyati; Dwi Aris Agung Nugrahaningsih; Eko Budiono; Heni Retnowulan; Yunika Puspadewi; Ira Puspitawati; Osman Sianipar; Dwiki Afandy; Susan Simanjaya; William Widitjiarso; Dyah Ayu Puspitarani; Fadil Fahri; Untung Riawan; Aditya Rifqi Fauzi; Alvin Santoso Kalim; Nur Rahmi Ananda; Amalia Setyati; Dwikisworo Setyowireni; Ida Safitri Laksanawati; Eggi Arguni; Titik Nuryastuti; Tri Wibawa
Journal:  BMC Med Genomics       Date:  2021-06-01       Impact factor: 3.063

Review 9.  Cell entry by SARS-CoV-2.

Authors:  Ruchao Peng; Lian-Ao Wu; Qingling Wang; Jianxun Qi; George Fu Gao
Journal:  Trends Biochem Sci       Date:  2021-06-07       Impact factor: 13.807

10.  SARS-CoV-2 within-host diversity and transmission.

Authors:  Katrina A Lythgoe; Matthew Hall; Luca Ferretti; Mariateresa de Cesare; George MacIntyre-Cockett; Amy Trebes; Monique Andersson; Newton Otecko; Emma L Wise; Nathan Moore; Jessica Lynch; Stephen Kidd; Nicholas Cortes; Matilde Mori; Rebecca Williams; Gabrielle Vernet; Anita Justice; Angie Green; Samuel M Nicholls; M Azim Ansari; Lucie Abeler-Dörner; Catrin E Moore; Timothy E A Peto; David W Eyre; Robert Shaw; Peter Simmonds; David Buck; John A Todd; Thomas R Connor; Shirin Ashraf; Ana da Silva Filipe; James Shepherd; Emma C Thomson; David Bonsall; Christophe Fraser; Tanya Golubchik
Journal:  Science       Date:  2021-03-09       Impact factor: 47.728

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