Literature DB >> 34373621

The evolutionary genomics of species' responses to climate change.

Jonás A Aguirre-Liguori1, Santiago Ramírez-Barahona2, Brandon S Gaut3.   

Abstract

Climate change is a threat to biodiversity. One way that this threat manifests is through pronounced shifts in the geographical range of species over time. To predict these shifts, researchers have primarily used species distribution models. However, these models are based on assumptions of niche conservatism and do not consider evolutionary processes, potentially limiting their accuracy and value. To incorporate evolution into the prediction of species' responses to climate change, researchers have turned to landscape genomic data and examined information about local genetic adaptation using climate models. Although this is an important advancement, this approach currently does not include other evolutionary processes-such as gene flow, population dispersal and genomic load-that are critical for predicting the fate of species across the landscape. Here, we briefly review the current practices for the use of species distribution models and for incorporating local adaptation. We next discuss the rationale and theory for considering additional processes, reviewing how they can be incorporated into studies of species' responses to climate change. We summarize with a conceptual framework of how manifold layers of information can be combined to predict the potential response of specific populations to climate change. We illustrate all of the topics using an exemplar dataset and provide the source code as potential tutorials. This Perspective is intended to be a step towards a more comprehensive integration of population genomics with climate change science.
© 2021. Springer Nature Limited.

Year:  2021        PMID: 34373621     DOI: 10.1038/s41559-021-01526-9

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   15.460


  75 in total

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Journal:  Nature       Date:  2003-01-02       Impact factor: 49.962

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Authors:  Fred W Allendorf; Paul A Hohenlohe; Gordon Luikart
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3.  Predicting the genetic consequences of future climate change: The power of coupling spatial demography, the coalescent, and historical landscape changes.

Authors:  Jason L Brown; Jennifer J Weber; Diego F Alvarado-Serrano; Michael J Hickerson; Steven J Franks; Ana C Carnaval
Journal:  Am J Bot       Date:  2016-01-08       Impact factor: 3.844

4.  Integrative approaches to guide conservation decisions: Using genomics to define conservation units and functional corridors.

Authors:  Soraia Barbosa; Frederico Mestre; Thomas A White; Joana Paupério; Paulo C Alves; Jeremy B Searle
Journal:  Mol Ecol       Date:  2018-08-13       Impact factor: 6.185

5.  Recent responses to climate change reveal the drivers of species extinction and survival.

Authors:  Cristian Román-Palacios; John J Wiens
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-10       Impact factor: 11.205

6.  Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation.

Authors:  Matthew C Fitzpatrick; Stephen R Keller
Journal:  Ecol Lett       Date:  2014-09-30       Impact factor: 9.492

7.  Natural selection on the Arabidopsis thaliana genome in present and future climates.

Authors:  Moises Exposito-Alonso; Hernán A Burbano; Oliver Bossdorf; Rasmus Nielsen; Detlef Weigel
Journal:  Nature       Date:  2019-08-28       Impact factor: 49.962

8.  Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana.

Authors:  Moises Exposito-Alonso; François Vasseur; Wei Ding; George Wang; Hernán A Burbano; Detlef Weigel
Journal:  Nat Ecol Evol       Date:  2017-12-18       Impact factor: 15.460

9.  Uncertainty in ensembles of global biodiversity scenarios.

Authors:  Wilfried Thuiller; Maya Guéguen; Julien Renaud; Dirk N Karger; Niklaus E Zimmermann
Journal:  Nat Commun       Date:  2019-03-29       Impact factor: 14.919

10.  An integrated framework to identify wildlife populations under threat from climate change.

Authors:  Orly Razgour; John B Taggart; Stephanie Manel; Javier Juste; Carlos Ibáñez; Hugo Rebelo; Antton Alberdi; Gareth Jones; Kirsty Park
Journal:  Mol Ecol Resour       Date:  2017-07-25       Impact factor: 7.090

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  6 in total

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Authors:  Amanda Xuereb; Quentin Rougemont; Peter Tiffin; Huijie Xue; Megan Phifer-Rixey
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2.  Data-driven, participatory characterization of farmer varieties discloses teff breeding potential under current and future climates.

Authors:  Aemiro Bezabih Woldeyohannes; Sessen Daniel Iohannes; Mara Miculan; Leonardo Caproni; Jemal Seid Ahmed; Kauê de Sousa; Ermias Abate Desta; Carlo Fadda; Mario Enrico Pè; Matteo Dell'Acqua
Journal:  Elife       Date:  2022-09-02       Impact factor: 8.713

3.  Understanding the biology of species' ranges: when and how does evolution change the rules of ecological engagement?

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2022-02-21       Impact factor: 6.671

Review 4.  Evolutionary Ecology of Plant-Arthropod Interactions in Light of the "Omics" Sciences: A Broad Guide.

Authors:  Ivan M De-la-Cruz; Femke Batsleer; Dries Bonte; Carolina Diller; Timo Hytönen; Anne Muola; Sonia Osorio; David Posé; Martijn L Vandegehuchte; Johan A Stenberg
Journal:  Front Plant Sci       Date:  2022-04-25       Impact factor: 6.627

Review 5.  Supporting in situ conservation of the genetic diversity of crop wild relatives using genomic technologies.

Authors:  Peterson W Wambugu; Robert Henry
Journal:  Mol Ecol       Date:  2022-02-25       Impact factor: 6.622

6.  Exploiting spatial dimensions to enable parallelized continuous directed evolution.

Authors:  Ting Wei; Wangsheng Lai; Qian Chen; Yi Zhang; Chenjian Sun; Xionglei He; Guoping Zhao; Xiongfei Fu; Chenli Liu
Journal:  Mol Syst Biol       Date:  2022-09       Impact factor: 13.068

  6 in total

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