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Literature DB >> 20847747

Genomics and the future of conservation genetics.

Fred W Allendorf¹, Paul A Hohenlohe, Gordon Luikart.

Abstract

We will soon have complete genome sequences from thousands of species, as well as from many individuals within species. This coming explosion of information will transform our understanding of the amount, distribution and functional significance of genetic variation in natural populations. Now is a crucial time to explore the potential implications of this information revolution for conservation genetics and to recognize limitations in applying genomic tools to conservation issues. We identify and discuss those problems for which genomics will be most valuable for curbing the accelerating worldwide loss of biodiversity. We also provide guidance on which genomics tools and approaches will be most appropriate to use for different aspects of conservation.

Mesh：

Year: 2010 PMID： 20847747 DOI： 10.1038/nrg2844

Source DB: PubMed Journal: Nat Rev Genet ISSN： 1471-0056 Impact factor: 53.242

108 in total

1. Considering evolutionary processes in conservation biology.

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Journal: Trends Ecol Evol Date: 2000-07 Impact factor: 17.712

2. Plasticity in salt tolerance traits allows for invasion of novel habitat by Japanese knotweed s. l. (Fallopia japonica and F.xbohemica, Polygonaceae).

Authors: Christina L Richards; Ramona L Walls; John P Bailey; Radha Parameswaran; Tara George; Massimo Pigliucci
Journal: Am J Bot Date: 2008-08 Impact factor: 3.844

Review 3. Genomics and conservation genetics.

Authors: Michael H Kohn; William J Murphy; Elaine A Ostrander; Robert K Wayne
Journal: Trends Ecol Evol Date: 2006-09-05 Impact factor: 17.712

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Journal: Genetics Date: 2007-03-04 Impact factor: 4.562

5. Functional metagenomic profiling of nine biomes.

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Journal: Nature Date: 2008-03-12 Impact factor: 49.962

6. Parentage and sibship inference from multilocus genotype data under polygamy.

Authors: J Wang; A W Santure
Journal: Genetics Date: 2009-02-16 Impact factor: 4.562

7. Conservation: The genome of the American West.

Authors: Emma Marris
Journal: Nature Date: 2009-02-19 Impact factor: 49.962

8. QTL mapping of inbreeding-related cold sensitivity and conditional lethality in Drosophila melanogaster.

Authors: C J Vermeulen; R Bijlsma; V Loeschcke
Journal: J Evol Biol Date: 2008-07-08 Impact factor: 2.411

9. Expressed sequence tag-linked microsatellites as a source of gene-associated polymorphisms for detecting signatures of divergent selection in atlantic salmon (Salmo salar L.).

Authors: Anti Vasemägi; Jan Nilsson; Craig R Primmer
Journal: Mol Biol Evol Date: 2005-02-02 Impact factor: 16.240

10. Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

Authors: Ary A Hoffmann; Loren H Rieseberg
Journal: Annu Rev Ecol Evol Syst Date: 2008-12-01 Impact factor: 13.915

281 in total

1. New perspectives on the evolution of plant mating systems.

Authors: Jeffrey D Karron; Christopher T Ivey; Randall J Mitchell; Michael R Whitehead; Rod Peakall; Andrea L Case
Journal: Ann Bot Date: 2011-12-30 Impact factor: 4.357

2. Harnessing genomics for delineating conservation units.

Authors: W Chris Funk; John K McKay; Paul A Hohenlohe; Fred W Allendorf
Journal: Trends Ecol Evol Date: 2012-06-21 Impact factor: 17.712

3. Genome-wide signatures of population bottlenecks and diversifying selection in European wolves.

Authors: M Pilot; C Greco; B M vonHoldt; B Jędrzejewska; E Randi; W Jędrzejewski; V E Sidorovich; E A Ostrander; R K Wayne
Journal: Heredity (Edinb) Date: 2013-12-18 Impact factor: 3.821

4. Extensive linkage disequilibrium and parallel adaptive divergence across threespine stickleback genomes.

Authors: Paul A Hohenlohe; Susan Bassham; Mark Currey; William A Cresko
Journal: Philos Trans R Soc Lond B Biol Sci Date: 2012-02-05 Impact factor: 6.237

Review 5. Genome-wide genetic marker discovery and genotyping using next-generation sequencing.

Authors: John W Davey; Paul A Hohenlohe; Paul D Etter; Jason Q Boone; Julian M Catchen; Mark L Blaxter
Journal: Nat Rev Genet Date: 2011-06-17 Impact factor: 53.242

Review 6. Emerging knowledge from genome sequencing of crop species.

Authors: Delfina Barabaschi; Davide Guerra; Katia Lacrima; Paolo Laino; Vania Michelotti; Simona Urso; Giampiero Valè; Luigi Cattivelli
Journal: Mol Biotechnol Date: 2012-03 Impact factor: 2.695

7. Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing.

Authors: Paul A Hohenlohe; Mitch D Day; Stephen J Amish; Michael R Miller; Nick Kamps-Hughes; Matthew C Boyer; Clint C Muhlfeld; Fred W Allendorf; Eric A Johnson; Gordon Luikart
Journal: Mol Ecol Date: 2013-02-21 Impact factor: 6.185