Literature DB >> 34753353

Individual-based eco-evolutionary models for understanding adaptation in changing seas.

Amanda Xuereb1, Quentin Rougemont2, Peter Tiffin3, Huijie Xue4, Megan Phifer-Rixey5.   

Abstract

As climate change threatens species' persistence, predicting the potential for species to adapt to rapidly changing environments is imperative for the development of effective conservation strategies. Eco-evolutionary individual-based models (IBMs) can be useful tools for achieving this objective. We performed a literature review to identify studies that apply these tools in marine systems. Our survey suggested that this is an emerging area of research fuelled in part by developments in modelling frameworks that allow simulation of increasingly complex ecological, genetic and demographic processes. The studies we identified illustrate the promise of this approach and advance our understanding of the capacity for adaptation to outpace climate change. These studies also identify limitations of current models and opportunities for further development. We discuss three main topics that emerged across studies: (i) effects of genetic architecture and non-genetic responses on adaptive potential; (ii) capacity for gene flow to facilitate rapid adaptation; and (iii) impacts of multiple stressors on persistence. Finally, we demonstrate the approach using simple simulations and provide a framework for users to explore eco-evolutionary IBMs as tools for understanding adaptation in changing seas.

Entities:  

Keywords:  SLiM; climate change; eco-evolutionary model; individual-based model; marine

Mesh:

Year:  2021        PMID: 34753353      PMCID: PMC8580472          DOI: 10.1098/rspb.2021.2006

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  58 in total

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Authors:  O Hoegh-Guldberg; P J Mumby; A J Hooten; R S Steneck; P Greenfield; E Gomez; C D Harvell; P F Sale; A J Edwards; K Caldeira; N Knowlton; C M Eakin; R Iglesias-Prieto; N Muthiga; R H Bradbury; A Dubi; M E Hatziolos
Journal:  Science       Date:  2007-12-14       Impact factor: 47.728

2.  SLiM: simulating evolution with selection and linkage.

Authors:  Philipp W Messer
Journal:  Genetics       Date:  2013-05-24       Impact factor: 4.562

3.  The next generation of scenarios for climate change research and assessment.

Authors:  Richard H Moss; Jae A Edmonds; Kathy A Hibbard; Martin R Manning; Steven K Rose; Detlef P van Vuuren; Timothy R Carter; Seita Emori; Mikiko Kainuma; Tom Kram; Gerald A Meehl; John F B Mitchell; Nebojsa Nakicenovic; Keywan Riahi; Steven J Smith; Ronald J Stouffer; Allison M Thomson; John P Weyant; Thomas J Wilbanks
Journal:  Nature       Date:  2010-02-11       Impact factor: 49.962

4.  Larval connectivity across temperature gradients and its potential effect on heat tolerance in coral populations.

Authors:  Joan A Kleypas; Diane M Thompson; Frederic S Castruccio; Enrique N Curchitser; Malin Pinsky; James R Watson
Journal:  Glob Chang Biol       Date:  2016-05-30       Impact factor: 10.863

5.  Does gene flow constrain adaptive divergence or vice versa? A test using ecomorphology and sexual isolation in Timema cristinae walking-sticks.

Authors:  P Nosil; B J Crespi
Journal:  Evolution       Date:  2004-01       Impact factor: 3.694

Review 6.  Signs of adaptation to local pH conditions across an environmental mosaic in the California Current Ecosystem.

Authors:  M H Pespeni; F Chan; B A Menge; S R Palumbi
Journal:  Integr Comp Biol       Date:  2013-08-26       Impact factor: 3.326

7.  Copy number variants outperform SNPs to reveal genotype-temperature association in a marine species.

Authors:  Yann Dorant; Hugo Cayuela; Kyle Wellband; Martin Laporte; Quentin Rougemont; Claire Mérot; Eric Normandeau; Rémy Rochette; Louis Bernatchez
Journal:  Mol Ecol       Date:  2020-08-17       Impact factor: 6.185

8.  Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod.

Authors:  Paul R Berg; Bastiaan Star; Christophe Pampoulie; Marte Sodeland; Julia M I Barth; Halvor Knutsen; Kjetill S Jakobsen; Sissel Jentoft
Journal:  Sci Rep       Date:  2016-03-17       Impact factor: 4.379

9.  Doom and boom on a resilient reef: climate change, algal overgrowth and coral recovery.

Authors:  Guillermo Diaz-Pulido; Laurence J McCook; Sophie Dove; Ray Berkelmans; George Roff; David I Kline; Scarla Weeks; Richard D Evans; David H Williamson; Ove Hoegh-Guldberg
Journal:  PLoS One       Date:  2009-04-22       Impact factor: 3.240

10.  Efficient pedigree recording for fast population genetics simulation.

Authors:  Jerome Kelleher; Kevin R Thornton; Jaime Ashander; Peter L Ralph
Journal:  PLoS Comput Biol       Date:  2018-11-01       Impact factor: 4.475

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  1 in total

1.  Evolution in changing seas.

Authors:  Katie E Lotterhos; Molly Albecker; Geoffrey C Trussell
Journal:  Proc Biol Sci       Date:  2021-12-22       Impact factor: 5.349

  1 in total

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