Literature DB >> 34321637

Regional and functional division of functional elements of solid-state nanochannels for enhanced sensitivity and specificity of biosensing in complex matrices.

Pengcheng Gao1, Dagui Wang1, Cheng Che1, Qun Ma1, Xiaoqing Wu1, Yajie Chen1, Hongquan Xu1, Xinchun Li2, Yu Lin1, Defang Ding1, Xiaoding Lou1, Fan Xia3.   

Abstract

Solid-state nanochannels (SSNs) provide a promising approach for biosensing due to the confinement of molecules inside, their great mechanical strength and diversified surface chemical properties; however, until now, their sensitivity and specificity have not satisfied the practical requirements of sensing applications, especially in complex matrices, i.e., media of diverse constitutions. Here, we report a protocol to achieve explicit regional and functional division of functional elements at the outer surface (FEOS) and inner wall (FEIW) of SSNs, which offers a nanochannel-based sensing platform with enhanced specificity and sensitivity. The protocol starts with the fabrication and characterization of the distribution of FEOS and FEIW. Then, the evaluation of the contributions of FEOS and FEIW to ionic gating is described; the FEIW mainly regulate ionic gating, and the FEOS can produce a synergistic effect. Finally, hydrophobic or highly charged FEOS are applied to ward off interference molecules, non-target molecules that may affect the ionic signal of nanochannels, which decreases false signals and helps to achieve the highly specific ionic output in complex matrices. Compared with other methods currently available, this method will contribute to the fundamental understanding of substance transport in SSNs and provide high specificity and sensitivity in SSN-based analyses. The procedure takes 3-6 d to complete.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

Year:  2021        PMID: 34321637     DOI: 10.1038/s41596-021-00574-6

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  60 in total

1.  Unraveling single-stranded DNA in a solid-state nanopore.

Authors:  Stefan W Kowalczyk; Maarten W Tuijtel; Serge P Donkers; Cees Dekker
Journal:  Nano Lett       Date:  2010-04-14       Impact factor: 11.189

2.  Solid-state nanopore channels with DNA selectivity.

Authors:  Samir M Iqbal; Demir Akin; Rashid Bashir
Journal:  Nat Nanotechnol       Date:  2007-04-01       Impact factor: 39.213

Review 3.  Biomimetic smart nanopores and nanochannels.

Authors:  Xu Hou; Wei Guo; Lei Jiang
Journal:  Chem Soc Rev       Date:  2011-02-10       Impact factor: 54.564

Review 4.  Building membrane nanopores.

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Journal:  Nat Nanotechnol       Date:  2017-07-06       Impact factor: 39.213

5.  Discrimination of oligonucleotides of different lengths with a wild-type aerolysin nanopore.

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6.  Analysis of electrolyte transport through charged nanopores.

Authors:  P B Peters; R van Roij; M Z Bazant; P M Biesheuvel
Journal:  Phys Rev E       Date:  2016-05-13       Impact factor: 2.529

7.  Voltage-Rectified Current and Fluid Flow in Conical Nanopores.

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Journal:  Acc Chem Res       Date:  2016-09-30       Impact factor: 22.384

8.  Detecting DNA cytosine methylation using nanopore sequencing.

Authors:  Jared T Simpson; Rachael E Workman; P C Zuzarte; Matei David; L J Dursi; Winston Timp
Journal:  Nat Methods       Date:  2017-02-20       Impact factor: 28.547

Review 9.  Three decades of nanopore sequencing.

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Journal:  Nat Biotechnol       Date:  2016-05-06       Impact factor: 54.908

10.  Nanopore sequencing: from imagination to reality.

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