| Literature DB >> 34298747 |
Paul Lacaze1,2, Andrew Bakshi1, Moeen Riaz1, Suzanne G Orchard1, Jane Tiller1, Johannes T Neumann1, Prudence R Carr1, Amit D Joshi2, Yin Cao3, Erica T Warner2, Alisa Manning2, Tú Nguyen-Dumont4,5, Melissa C Southey4,5, Roger L Milne4,5,6, Leslie Ford7, Robert Sebra8, Eric Schadt8, Lucy Gately9, Peter Gibbs9, Bryony A Thompson10, Finlay A Macrae10, Paul James10, Ingrid Winship10, Catriona McLean11, John R Zalcberg1, Robyn L Woods1, Andrew T Chan2, Anne M Murray12, John J McNeil1.
Abstract
Genomic risk prediction models for breast cancer (BC) have been predominantly developed with data from women aged 40-69 years. Prospective studies of older women aged ≥70 years have been limited. We assessed the effect of a 313-variant polygenic risk score (PRS) for BC in 6339 older women aged ≥70 years (mean age 75 years) enrolled into the ASPREE trial, a randomized double-blind placebo-controlled clinical trial investigating the effect of daily 100 mg aspirin on disability-free survival. We evaluated incident BC diagnoses over a median follow-up time of 4.7 years. A multivariable Cox regression model including conventional BC risk factors was applied to prospective data, and re-evaluated after adding the PRS. We also assessed the association of rare pathogenic variants (PVs) in BC susceptibility genes (BRCA1/BRCA2/PALB2/CHEK2/ATM). The PRS, as a continuous variable, was an independent predictor of incident BC (hazard ratio (HR) per standard deviation (SD) = 1.4, 95% confidence interval (CI) 1.3-1.6) and hormone receptor (ER/PR)-positive disease (HR = 1.5 (CI 1.2-1.9)). Women in the top quintile of the PRS distribution had over two-fold higher risk of BC than women in the lowest quintile (HR = 2.2 (CI 1.2-3.9)). The concordance index of the model without the PRS was 0.62 (95% CI 0.56-0.68), which improved after addition of the PRS to 0.65 (95% CI 0.59-0.71). Among 41 (0.6%) carriers of PVs in BC susceptibility genes, we observed no incident BC diagnoses. Our study demonstrates that a PRS predicts incident BC risk in women aged 70 years and older, suggesting potential clinical utility extends to this older age group.Entities:
Keywords: breast cancer; genomics; germline; polygenic risk score; risk prediction
Year: 2021 PMID: 34298747 PMCID: PMC8305131 DOI: 10.3390/cancers13143533
Source DB: PubMed Journal: Cancers (Basel) ISSN: 2072-6694 Impact factor: 6.639
Characteristics of the study population.
| Characteristics | Total | Low-Risk PRS | Moderate-Risk PRS | High-Risk PRS |
|---|---|---|---|---|
|
| ||||
|
| 6339 (100) | 1268 (100) | 3803 (100) | 1268 (100) |
|
| 75.1 | 75.1 | 75.1 | 75.2 |
|
| ||||
| 70–74 | 3825 (60.3) | 778 (61.4) | 2287 (60.1) | 760 (59.9) |
| 75–79 | 1599 (25.5) | 304 (24.0) | 975 (25.6) | 320 (25.2) |
| 80–84 | 706 (11.1) | 136 (10.7) | 429 (11.3) | 141 (11.1) |
| 85+ | 211 (3.3) | 50 (3.9) | 112 (2.9) | 47 (3.7) |
|
| 1974 (31.1) | 391 (30.8) | 1195 (31.4) | 388 (30.6) |
|
| 497 (7.8) | 97 (7.6) | 289 (7.6) | 111 (8.8) |
|
| 3170 (50.0) | 630 (49.7) | 1898 (49.9) | 642 (50.6) |
|
| 28.03 (5.09) | 28.02 (5.02) | 28.05 (5.10) | 28.00 (5.13) |
|
| 4730 (74.6) | 941 (74.2) | 2850 (74.9) | 939 (74.1) |
|
| 533 (8.4) | 103 (8.1) | 321 (8.4) | 109 (8.6) |
|
| 6 (0.2) | 1 (0.1) | 3 (0.1) | 2 (0.2) |
|
| 850 (13.4) | 135 (10.6) | 500 (13.1) | 215 (17.0) |
|
| ||||
| Cases | 475 | 47 | 288 | 140 |
| Diagnosed <49 Years | 60 | 6 | 39 | 15 |
| Diagnosed 50+ Years | 415 | 41 | 249 | 125 |
|
| ||||
| Cases | 129 | 21 | 66 | 42 |
|
| 0.1 (0.53) | −0.93 (0.26) | −0.13 (0.27) | 0.69 (0.28) |
PRS = Polygenic risk score, Q = Quintile, HRT = Hormone replacement therapy. * Estrogen alone or in combination with progesterone; ¶ Non-metastatic and metastatic events; ‡ Family history in first-degree blood relative (mother, sibling or child).
Association of a polygenic risk score (PRS) with incident breast cancer (BC) risk in 6339 older women. A multivariable Cox proportional hazards regression model was used to evaluate the association between PRS as a continuous or categorical variable with incident BC (n = 110 cases), after adjusting for family history of BC (first-degree blood relatives), treatment (aspirin/placebo), age at enrolment, number of children, alcohol use, BMI at enrolment and use of hormone replacement therapy (HRT) at enrolment.
| Variable | PRS as Continuous Variable | PRS as Categorical Variable | ||||
|---|---|---|---|---|---|---|
| Hazard Ratio | 95% CI | Hazard Ratio | 95% CI | |||
| Polygenic Score | 1.43 | (1.18; 1.73) | <0.001 | |||
| Low PRS (Q1) | Reference | |||||
| Moderate PRS (Q2,3,4) | 1.16 | (0.68; 2.00) | 0.58 | |||
| High PRS (Q5) | 2.16 | (1.21; 3.86) | 0.009 | |||
| Pathogenic Variants | No incident events | No incident events | ||||
| Family History of Breast Cancer * (Y/N) | 1.81 | (1.15; 2.85) | 0.01 | 1.83 | (1.16; 2.88) | 0.009 |
| Age at Enrolment | 0.97 | (0.92; 1.02) | 0.21 | 0.97 | (0.92; 1.02) | 0.22 |
| Treatment (Aspirin) | 1.16 | (0.80; 1.69) | 0.44 | 1.15 | (0.79; 1.68) | 0.45 |
| Number of Children | 0.81 | (0.66; 0.99) | 0.04 | 0.81 | (0.66; 0.99) | 0.04 |
| Body Mass Index (kg/m2 (mean) SD) | 1.14 | (0.95; 1.37) | 0.17 | 1.14 | (0.95; 1.37) | 0.15 |
| Alcohol (None) | Reference | Reference | ||||
| Alcohol (Low) | 1.16 | (0.68; 1.97) | 0.59 | 1.16 | (0.68; 1.98) | 0.58 |
| Alcohol (High) | 1.70 | (1.01; 2.85) | 0.04 | 1.70 | (1.02; 2.86) | 0.04 |
| HRT ‡ (Y/N) | 1.54 | (0.88; 2.71) | 0.13 | 1.51 | (0.86; 2.65) | 0.15 |
BMI = Body mass index, HRT = Hormone replacement therapy, PRS = Polygenic risk score, CI = Confidence Interval, SD = Standard deviation. * Family history in first-degree blood relative (mother, sibling or child); ‡ Estrogen alone or in combination with progesterone.
Figure 1Association of a polygenic risk score (PRS) with incident and prevalent breast cancer (BC) risk in 6339 older women. We evaluated incident BC diagnoses over a median follow-up of 4.7 years and prevalent BC diagnosed pre-enrolment (self-reported). A multivariable Cox regression model including conventional risk factors examined the association between incident BC risk and the PRS as a categorical variable by quintiles (Q) of the distribution (low- (Q1), medium- (Q2–4), high- (Q5) risk groups), adjusting for family history of BC (first-degree blood relatives), treatment (aspirin/placebo), age at enrolment, number of children, alcohol consumption, body mass index (BMI) at enrolment, and use of estrogen or estrogen/progesterone hormone replacement therapy (HRT) at enrolment. Logistic regression examined associations with prevalent BC, adjusting for family history of BC (first-degree blood relatives) and pathogenic variants in BC-associated genes, represented by odds ratio (OR).
Figure 2Competing risk survival curves for incident breast cancer according to PRS groups. The PRS distribution was categorized by quintiles (Q) of the distribution into three groups: low-risk (Q1, green), medium-risk (Q2–4, brown) and high-risk (Q5, red). Competing risk estimates of the cumulative incidence were calculated for each group, adjusting for the following covariates: family history of BC (first-degree blood relatives), treatment (aspirin/placebo), age at enrolment, number of children, alcohol consumption, body mass index (BMI) at enrolment, and use of estrogen or estrogen/progesterone hormone replacement therapy (HRT) at enrolment.
Figure 3PRS distribution of female pathogenic variant (PV) carriers who were affected (red) or unaffected (blue) by prevalent BC. Density represents the proportion of individuals in each PRS group (low/medium/high). The PRS is distributed normally according to scaled PRS score (mean 0, standard deviation 1). PV carriers are highlighted across the PRS distribution.