| Literature DB >> 34243074 |
Adel S Girgis1, Siva S Panda2, Aladdin M Srour3, Anwar Abdelnaser4, Soad Nasr5, Yassmin Moatasim6, Omnia Kutkat6, Ahmed El Taweel6, Ahmed Kandeil6, Ahmed Mostafa6, Mohamed A Ali6, Nehmedo G Fawzy7, Mohamed S Bekheit7, ElSayed M Shalaby8, Lara Gigli9, Walid Fayad10, Ahmed A F Soliman10.
Abstract
Sets of 3-alkenyl-2-oxindoles (6,10,13) were synthesized in a facile synthetic pathway through acid dehydration (EtOH/HCl) of the corresponding 3-hydroxy-2-oxoindolines (5,9,12). Single crystal (10a,c) and powder (12a,26f) X-ray studies supported the structures. Compounds 6c and 10b are the most effective agents synthesized (about 3.4, 3.3 folds, respectively) against PaCa2 (pancreatic) cancer cell line relative to the standard reference used (Sunitinib). Additionally, compound 10b reveals antiproliferative properties against MCF7 (breast) cancer cell with IC50 close to that of Sunitinib. CAM testing reveals that compounds 6 and 10 demonstrated qualitative and quantitative decreases in blood vessel count and diameter with efficacy comparable to that of Sunitinib, supporting their anti-angiogenic properties. Kinase inhibitory properties support their multi-targeted inhibitory activities against VEGFR-2 and c-kit in similar behavior to that of Sunitinib. Cell cycle analysis studies utilizing MCF7 exhibit that compound 6b arrests the cell cycle at G1/S phase while, 10b reveals accumulation of the tested cell at S phase. Compounds 6a and 10b reveal potent antiviral properties against SARS-CoV-2 with high selectivity index relative to the standards (hydroxychloroquine, chloroquine). Safe profile of the potent synthesized agents, against normal cells (VERO-E6, RPE1), support the possible development of better hits based on the attained observations.Entities:
Keywords: Antitumor; Benzimidazole; Docking; Indole; SARS-CoV-2; VEGFR-2; c-Kit
Year: 2021 PMID: 34243074 PMCID: PMC8241580 DOI: 10.1016/j.bioorg.2021.105131
Source DB: PubMed Journal: Bioorg Chem ISSN: 0045-2068 Impact factor: 5.275
Fig. 1Biologically active 3-alkenyl-2-oxindoles, multi-targeted anticancer agents and Treanda (Bendamustine).
Fig. 2Repurposing drugs for COVID-19.
Scheme 1Synthetic route towards 5 and 6.
Scheme 2Synthetic route towards 9 and 10.
Fig. 3ORTEP view of compounds (A) 10a and (B) 10c showing the atom-numbering scheme. H atoms are shown as small spheres of arbitrary radii.
Fig. 4ORTEP view of compounds (A) 12a and (B) 12f showing the atom-numbering scheme. H atoms are shown as small spheres of arbitrary radii.
Scheme 3Synthetic route towards 12 and 13.
Antiproliferative properties of the tested compounds.
| Entry | Compd. | IC50 ( | ||
|---|---|---|---|---|
| PaCa-2 | MCF7 | HCT116 | ||
| 1 | 8.30 ± 0.44 | 6.85 ± 0.37 | 16.38 ± 0.70 | |
| 2 | 5.60 ± 0.57 | 4.25 ± 0.23 | 12.77 ± 1.41 | |
| 3 | 4.99 ± 0.29 | 4.28 ± 0.51 | 5.33 ± 0.46 | |
| 4 | 6.91 ± 0.89 | 6.07 ± 0.83 | 20.96 ± 1.75 | |
| 5 | 5.08 ± 0.57 | 4.15 ± 0.78 | 13.83 ± 1.06 | |
| 6 | 6.18 ± 0.32 | 4.43 ± 0.47 | >50.00 ± 0.84 | |
| 7 | 16.91 ± 0.95 | 3.97 ± 0.14 | 5.03 ± 0.30 | |
Fig. 5(A) Images and histology using H&E of the chick embryo chorioallantoic membrane (CAM) for vehicle control, positive control (Sunitinib) and test compounds. At day 8, eggs were opened carefully. Twenty μl of control vehicle or test compounds (final concentration of 660 μM) were left to dry on a 2.5 cm round glass slide on the surface of the CAM blood network. Eggs were covered and left in an incubator at 37 °C for 3 days. Later the membrane around the area of interest was fixed with 5% formalin, and paraffin embedded for further staining. Original images were done at 40x and 100x magnification “CM: chorionic membrane. ML: mesodermal layer. BV: blood vessel”. (B) Quantitative analysis of blood vessel diameter in mm after 3 days of treatment. Sunitinib (positive control) and test compounds all show significant reduction in BV diameters. All results are expressed as mean ± SD (n = 4) (***P < 0.001 in comparison to control).
Blood vessel diameter of tested compound and Sunitinib.
| Entry | Compd. | Mean diameter of blood vessels (mm ± SD “standard division”) |
|---|---|---|
| 1 | 14.00 ± 3.00 | |
| 2 | 5.00 ± 0.71 | |
| 3 | 3.20 ± 1.00 | |
| 4 | 5.10 ± 1.00 | |
| 5 | 5.13 ± 0.90 | |
| 6 | 3.50 ± 0.50 | |
| 7 | 2.70 ± 0.40 | |
| 8 | 5.00 ± 0.40 |
Kinase inhibitory properties of the promising antiproliferative 3-alkenyl-2-oxindoles (6a–c, 10a–c) synthesized and Sunitinib.
| Entry | Compd. | IC50 ( | |
|---|---|---|---|
| VEGFR-2 | c-kit | ||
| 1 | 54.03 ± 5.4 | 119.8 ± 12.0 | |
| 2 | 98.95 ± 9.9 | 247.7 ± 24.8 | |
| 3 | 36.86 ± 3.7 | 72.35 ± 7.2 | |
| 4 | 102.2 ± 10.2 | 103.3 ± 10.3 | |
| 5 | 74.06 ± 7.4 | 184.9 ± 18.5 | |
| 6 | 53.36 ± 5.3 | 81.7 ± 8.2 | |
| 7 | 47.54 ± 4.8 | 84.9 ± 8.5 | |
Fig. 6Kinase inhibitory properties of the tested compounds and Sunitinib.
Percentage cell distribution during induced cell cycle study for compounds 6b and 10b on MCF7 cells by PI-flow cytometry.
| Entry | Compd. | DNA content (%) | |||
|---|---|---|---|---|---|
| G0-G1 | S | G2/M | Pre-G1 | ||
| 1 | 54.08 | 43.25 | 2.67 | 34.71 | |
| 2 | 41.71 | 54.18 | 4.11 | 28.25 | |
| 3 | 53.79 | 41.12 | 5.09 | 1.49 | |
Fig. 7DNA content during induced cell cycle analysis study (MCF7) for the tested compounds and control experiment by PI-flow cytometry.
Fig. 8Cell cycle analysis and apoptosis induced by the tested compounds and control experiment for MCF7.
Percentage apoptosis and necrosis for compounds 6b and 10b on MCF7 cells induced by IC50 values.
| Entry | Compd. | Apoptosis (%) | Necrosis | ||
|---|---|---|---|---|---|
| Total | Early | Late | |||
| 1 | 34.71 | 2.51 | 22.91 | 9.29 | |
| 2 | 28.25 | 4.03 | 17.15 | 7.07 | |
| 3 | 1.49 | 0.49 | 0.13 | 0.87 | |
Antiviral properties of the tested compounds against SARS-CoV-2.
| Entry | Compd. | IC50 ( | CC50 ( | SIc |
|---|---|---|---|---|
| 1 | 3.799 | 1377 | 362.5 | |
| 2 | 55.14 | 1313 | 23.8 | |
| 3 | 13.52 | 356.9 | 26.4 | |
| 4 | 219 | 1617 | 7.4 | |
| 5 | 3.417 | 566 | 165.6 | |
| 6 | 20.1 | 1517 | 75.5 | |
| 7 | 29.25 | 356.4 | 12.2 | |
| 8 | 19.78 | 377.7 | 19.1 | |
| 9 | 1382 | 2633 | 1.9 |
aCC50 = Cytotoxic concentration due to 50% growth compared to the control experiment.
b IC50 = Inhibitory concentration due to 50% growth compared to the control experiment.
c SI (Selectivity index/therapeutical index) =
Fig. 9Dose-response curves for the tested compounds against SARS-CoV-2.
Molecular modeling results due to docking of compounds (6a–c, 10a–c) and Sunitinib in the PDB ID: 4AGD and 3G0E responsible for VEGFR-2 and c-kit inhibitors, respectively.
| Entry | Compd. | PDB ID: 4AGD | PDB ID: 3G0E | ||
|---|---|---|---|---|---|
| Docking score | Docking observations | Docking score | Docking observations | ||
| 1 | −31.48 | H-bond: indolyl CO | −50.99 | H-bond: indolyl CO - CYS673, indolyl NH | |
| 2 | −40.07 | H-bond: indolyl CO | −50.69 | H-bond: indolyl CO | |
| 3 | −35.67 | H-bond: indolyl CO | −56.56 | H-bond: indolyl CO | |
| 4 | −34.67 | H-bond: indolyl CO | −57.88 | H-bond: indolyl CO | |
| 5 | −39.46 | H-bond: indolyl CO | −55.81 | H-bond: indolyl CO | |
| 6 | –33.29 | H-bond: indolyl CO | −58.33 | H-bond: indolyl CO | |
| 7 | −53.64 | H-bond: indolyl CO | −59.88 | H-bond: indolyl CO | |
Docking score in kcal mol−1.