Literature DB >> 34211182

Quantitative flux analysis in mammals.

Caroline R Bartman1,2, Tara TeSlaa1,2, Joshua D Rabinowitz3,4.   

Abstract

Altered metabolic activity contributes to the pathogenesis of a number of diseases, including diabetes, heart failure, cancer, fibrosis and neurodegeneration. These diseases, and organismal metabolism more generally, are only partially recapitulated by cell culture models. Accordingly, it is important to measure metabolism in vivo. Over the past century, researchers studying glucose homeostasis have developed strategies for the measurement of tissue-specific and whole-body metabolic activity (pathway fluxes). The power of these strategies has been augmented by recent advances in metabolomics technologies. Here, we review techniques for measuring metabolic fluxes in intact mammals and discuss how to analyse and interpret the results. In tandem, we describe important findings from these techniques, and suggest promising avenues for their future application. Given the broad importance of metabolism to health and disease, more widespread application of these methods holds the potential to accelerate biomedical progress.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34211182      PMCID: PMC9289955          DOI: 10.1038/s42255-021-00419-2

Source DB:  PubMed          Journal:  Nat Metab        ISSN: 2522-5812


  97 in total

1.  The CD28 signaling pathway regulates glucose metabolism.

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Journal:  Immunity       Date:  2002-06       Impact factor: 31.745

2.  Metabolite profiling identifies a key role for glycine in rapid cancer cell proliferation.

Authors:  Mohit Jain; Roland Nilsson; Sonia Sharma; Nikhil Madhusudhan; Toshimori Kitami; Amanda L Souza; Ran Kafri; Marc W Kirschner; Clary B Clish; Vamsi K Mootha
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

3.  Influence of the burn wound on local and systemic responses to injury.

Authors:  D W Wilmore; L H Aulick; A D Mason; B A Pruitt
Journal:  Ann Surg       Date:  1977-10       Impact factor: 12.969

Review 4.  Stable Isotopes for Tracing Mammalian-Cell Metabolism In Vivo.

Authors:  Juan Fernández-García; Patricia Altea-Manzano; Erica Pranzini; Sarah-Maria Fendt
Journal:  Trends Biochem Sci       Date:  2020-01-17       Impact factor: 13.807

5.  Brain metabolism during fasting.

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Journal:  J Clin Invest       Date:  1967-10       Impact factor: 14.808

6.  Using isotope tracers to study metabolism: application in mouse models.

Authors:  Brendan J McCabe; Stephen F Previs
Journal:  Metab Eng       Date:  2004-01       Impact factor: 9.783

7.  Effect of injury and infection on visceral metabolism and circulation.

Authors:  D W Wilmore; C W Goodwin; L H Aulick; M C Powanda; A D Mason; B A Pruitt
Journal:  Ann Surg       Date:  1980       Impact factor: 12.969

8.  Alanine: key role in gluconeogenesis.

Authors:  P Felig; T Pozefsky; E Marliss; G F Cahill
Journal:  Science       Date:  1970-02-13       Impact factor: 47.728

9.  Metabolite Exchange between Mammalian Organs Quantified in Pigs.

Authors:  Cholsoon Jang; Sheng Hui; Xianfeng Zeng; Alexis J Cowan; Lin Wang; Li Chen; Raphael J Morscher; Jorge Reyes; Christian Frezza; Ho Young Hwang; Akito Imai; Yoshiaki Saito; Keitaro Okamoto; Christine Vaspoli; Loewe Kasprenski; Gerald A Zsido; Joseph H Gorman; Robert C Gorman; Joshua D Rabinowitz
Journal:  Cell Metab       Date:  2019-06-27       Impact factor: 31.373

10.  Arteriovenous Blood Metabolomics: A Readout of Intra-Tissue Metabostasis.

Authors:  Julijana Ivanisevic; Darlene Elias; Hiroshi Deguchi; Patricia M Averell; Michael Kurczy; Caroline H Johnson; Ralf Tautenhahn; Zhengjiang Zhu; Jeramie Watrous; Mohit Jain; John Griffin; Gary J Patti; Gary Siuzdak
Journal:  Sci Rep       Date:  2015-08-05       Impact factor: 4.379

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  6 in total

1.  The blood lactate/pyruvate equilibrium affair.

Authors:  George A Brooks; Adam D Osmond; Robert G Leija; Casey C Curl; Jose A Arevalo; Justin J Duong; Michael A Horning
Journal:  Am J Physiol Endocrinol Metab       Date:  2021-11-01       Impact factor: 4.310

Review 2.  Isotope tracing in health and disease.

Authors:  Wentao Dong; Eshaan S Rawat; Gregory Stephanopoulos; Monther Abu-Remaileh
Journal:  Curr Opin Biotechnol       Date:  2022-06-20       Impact factor: 10.279

Review 3.  Metabolic flux between organs measured by arteriovenous metabolite gradients.

Authors:  Hosung Bae; Katie Lam; Cholsoon Jang
Journal:  Exp Mol Med       Date:  2022-09-08       Impact factor: 12.153

Review 4.  Tracing the lactate shuttle to the mitochondrial reticulum.

Authors:  George A Brooks; Casey C Curl; Robert G Leija; Adam D Osmond; Justin J Duong; Jose A Arevalo
Journal:  Exp Mol Med       Date:  2022-09-08       Impact factor: 12.153

5.  Gut bacterial nutrient preferences quantified in vivo.

Authors:  Xianfeng Zeng; Xi Xing; Meera Gupta; Felix C Keber; Jaime G Lopez; Ying-Chiang J Lee; Asael Roichman; Lin Wang; Michael D Neinast; Mohamed S Donia; Martin Wühr; Cholsoon Jang; Joshua D Rabinowitz
Journal:  Cell       Date:  2022-09-01       Impact factor: 66.850

Review 6.  Integrating adipocyte insulin signaling and metabolism in the multi-omics era.

Authors:  C Martinez Calejman; W G Doxsey; D J Fazakerley; D A Guertin
Journal:  Trends Biochem Sci       Date:  2022-03-15       Impact factor: 14.264

  6 in total

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