Literature DB >> 31955965

Stable Isotopes for Tracing Mammalian-Cell Metabolism In Vivo.

Juan Fernández-García1, Patricia Altea-Manzano2, Erica Pranzini3, Sarah-Maria Fendt4.   

Abstract

Metabolism is at the cornerstone of all cellular functions and mounting evidence of its deregulation in different diseases emphasizes the importance of a comprehensive understanding of metabolic regulation at the whole-organism level. Stable-isotope measurements are a powerful tool for probing cellular metabolism and, as a result, are increasingly used to study metabolism in in vivo settings. The additional complexity of in vivo metabolic measurements requires paying special attention to experimental design and data interpretation. Here, we review recent work where in vivo stable-isotope measurements have been used to address relevant biological questions within an in vivo context, summarize different experimental and data interpretation approaches and their limitations, and discuss future opportunities in the field.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  in vivo metabolism; metabolic models; stable-isotope tracers; tracer analysis

Mesh:

Year:  2020        PMID: 31955965     DOI: 10.1016/j.tibs.2019.12.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  16 in total

Review 1.  Synthetic biomarkers: a twenty-first century path to early cancer detection.

Authors:  Gabriel A Kwong; Sharmistha Ghosh; Lena Gamboa; Christos Patriotis; Sudhir Srivastava; Sangeeta N Bhatia
Journal:  Nat Rev Cancer       Date:  2021-09-06       Impact factor: 60.716

Review 2.  Isotope tracing in health and disease.

Authors:  Wentao Dong; Eshaan S Rawat; Gregory Stephanopoulos; Monther Abu-Remaileh
Journal:  Curr Opin Biotechnol       Date:  2022-06-20       Impact factor: 10.279

Review 3.  Metabolic flux between organs measured by arteriovenous metabolite gradients.

Authors:  Hosung Bae; Katie Lam; Cholsoon Jang
Journal:  Exp Mol Med       Date:  2022-09-08       Impact factor: 12.153

4.  Gut bacterial nutrient preferences quantified in vivo.

Authors:  Xianfeng Zeng; Xi Xing; Meera Gupta; Felix C Keber; Jaime G Lopez; Ying-Chiang J Lee; Asael Roichman; Lin Wang; Michael D Neinast; Mohamed S Donia; Martin Wühr; Cholsoon Jang; Joshua D Rabinowitz
Journal:  Cell       Date:  2022-09-01       Impact factor: 66.850

Review 5.  Nutrient metabolism and cancer in the in vivo context: a metabolic game of give and take.

Authors:  Patricia Altea-Manzano; Alejandro M Cuadros; Lindsay A Broadfield; Sarah-Maria Fendt
Journal:  EMBO Rep       Date:  2020-09-23       Impact factor: 8.807

Review 6.  The metabolism of cancer cells during metastasis.

Authors:  Gabriele Bergers; Sarah-Maria Fendt
Journal:  Nat Rev Cancer       Date:  2021-01-18       Impact factor: 60.716

Review 7.  Immunometabolic Interplay in the Tumor Microenvironment.

Authors:  Irem Kaymak; Kelsey S Williams; Jason R Cantor; Russell G Jones
Journal:  Cancer Cell       Date:  2020-10-29       Impact factor: 31.743

Review 8.  Quantitative flux analysis in mammals.

Authors:  Caroline R Bartman; Tara TeSlaa; Joshua D Rabinowitz
Journal:  Nat Metab       Date:  2021-07-01

9.  Isotope tracing in adult zebrafish reveals alanine cycling between melanoma and liver.

Authors:  Fuad J Naser; Madelyn M Jackstadt; Ronald Fowle-Grider; Jonathan L Spalding; Kevin Cho; Ethan Stancliffe; Steven R Doonan; Eva T Kramer; Lijun Yao; Bradley Krasnick; Li Ding; Ryan C Fields; Charles K Kaufman; Leah P Shriver; Stephen L Johnson; Gary J Patti
Journal:  Cell Metab       Date:  2021-05-13       Impact factor: 31.373

10.  In Vivo Evidence for Serine Biosynthesis-Defined Sensitivity of Lung Metastasis, but Not of Primary Breast Tumors, to mTORC1 Inhibition.

Authors:  Gianmarco Rinaldi; Erica Pranzini; Joke Van Elsen; Dorien Broekaert; Cornelius M Funk; Mélanie Planque; Ginevra Doglioni; Patricia Altea-Manzano; Matteo Rossi; Vincent Geldhof; Shao Thing Teoh; Christina Ross; Kent W Hunter; Sophia Y Lunt; Thomas G P Grünewald; Sarah-Maria Fendt
Journal:  Mol Cell       Date:  2020-12-18       Impact factor: 19.328

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