| Literature DB >> 34125552 |
Belén Vaz1, Claudio Martínez1, Francisco Cruz1, J Gabriel Denis1, Ángel R de Lera1, José M Aurrecoechea2, Rosana Álvarez1.
Abstract
Dehydrotryptophan derivatives have been prepared by palladium-catalyzed aminocyclization-Heck-type coupling cascades starting from o-alkynylaniline derivatives and methyl α-aminoacrylate. Aryl, alkyl (primary, secondary, and tertiary), and alkenyl substituents have been introduced at the indole C-2 position. Further variations at the indole benzene ring, as well as the C-2-unsubstituted case, have all been demonstrated. In the case of C-2 aryl substitution, the preparation of the o-alkynylaniline substrate by Sonogashira coupling and the subsequent cyclization-coupling cascade have been performed in a one-pot protocol with a single catalyst. DFT calculations have revealed significant differences in the reaction profiles of these reactions relative to those involving methyl acrylate or methacrylate, and between the reactions of the free anilines and their corresponding carbamates. Those calculations suggest that the nature of the alkene and of the acid HX released in the HX/alkene exchange step that precedes C-C bond formation could be responsible for the experimentally observed differences in reaction efficiencies.Entities:
Year: 2021 PMID: 34125552 PMCID: PMC8929666 DOI: 10.1021/acs.joc.1c00636
Source DB: PubMed Journal: J Org Chem ISSN: 0022-3263 Impact factor: 4.354
Scheme 1Palladium-catalyzed Oxidative Heterocyclization–Coupling Cascades and Application to the Preparation of Dehydrotrytophans
Survey of Reaction Conditions for Aminocyclization–Heck Coupling Between o-Alkynylaniline Derivatives 1 and 2 and Methyl α-Acetamidoacrylate (3)a
| Entry | R1, R2 | [Pd], L | Yield of | ||||
|---|---|---|---|---|---|---|---|
| 1 | H, | PdCl2 | 18 | 39 | 1:1 | ||
| 2 | H, | PdCl2(PPh3)2 | 7 | 63 | 4:1 | ||
| 3 | H, | PdCl2, ( | 18 | 54 | 5:1 | ||
| 4 | H, | PdCl2, ( | 18 | 33 | 2:1 | ||
| 5 | H, | Pd(OAc)2, PPh3 | 18 | 36 | 2:1 | ||
| 6 | H, | PdCl2(PPh3)2 | 4 | 20 | |||
| 7 | H, | PdCl2(PPh3)2 | 5 | 43 | |||
| 8 | CO2Et, | PdCl2(PPh3)2 | 31 | 72 | |||
| 9 | CO2Et, | PdCl2(PPh3)2 | 31 | 18, 40 | only | ||
| 10 | CO2Et, | PdCl2(PPh3)2 | 43 | – |
Taken (in part) from Cruz, F. Development of cascade reactions catalyzed by Palladium and their application to the synthesis of heterocycles, Ph.D. Thesis, Universidade de Vigo, 2019. Reaction conditions: Alkynylaniline derivative 1 or 2, alkene 3 (6 equiv), a Pd complex (5 mol %), a phosphine ligand (where appropriate, 10 mol %), and KI (0.5 equiv) were heated in DMF (10 mL/mmol) at 100 °C under air for the indicated time.
Isolated yield (%).
Measured in the crude reaction mixture.
Not determined due to signal overlap.
No reaction.
Preparation of 2-Aryldehydrotryptophans 4a, 4d–n (R2 = Ar) from 2-Iodoarylcarbamates 7a
| Entry | R3 | R4 | R2 | Yield of | |||
|---|---|---|---|---|---|---|---|
| 1 | H | H | 6, 31, 4 | 62 | |||
| 2 | H | H | ( | 6, 30, 4 | 73 | ||
| 3 | H | H | ( | 6, 40, 4 | 59 | ||
| 4 | Br | H | 5, 41, 3 | 68 | |||
| 5 | H | Br | 4, 40, 3 | 62 | |||
| 6 | CO2Me | H | 4, 40, 3 | 49 | |||
| 7 | OMe | H | 4, 40, 3 | 55 | |||
| 8 | H | H | ( | 21, 48, 6 | 58 | ||
| 9 | H | H | ( | 21, 48, 5 | 50 | ||
| 10 | H | H | ( | 21, 48, 4 | 59 | ||
| 11 | H | H | (3,4-diF)C6H3 | 21, 48, 5 | 58 | ||
| 12 | H | H | 3-thienyl | 21, 48, 5 | 51 |
Taken (in part) from Cruz, F. Development of cascade reactions catalyzed by Palladium and their application to the synthesis of heterocycles, Ph. D. Thesis, Universidade de Vigo, 2019. Reaction conditions. Step 1: Iodide 7, alkene 3 (6 equiv), alkyne 8 (2 equiv), PdCl2 (5 mol %), polymer-bound PPh3 (10 mol % of PPh3 relative to 7), CuI (20 mol %), Et3N (4.5 equiv) in DMF (10 mL/mmol) at 60 °C under Ar. Step 2:120 °C under air. Step 3: t-BuNH2 (30 equiv), MeOH (21 mL/mmol), reflux.
Reaction times for steps 1–3.
Isolated yield (%).
Scheme 2Preparation of 2-Alkyldehydrotryptophans from 2-Alkynylaniline Carbamates
Reaction conditions: (i) alkene 3 (6 equiv), PdCl2(PPh3) 2 (10 mol %), KI (0.5 equiv), DMF, air, 100 °C (2b and 2p) or 120 °C (2o). (ii) t-BuNH2 (30 equiv), MeOH, 90 °C.
Preparation of 2-Alkyl- and 2-Alkenyldehydrotryptophans 10 from N-(PMB)-2-Alkynylanilines 9a
| Entry | R1 | R2 | Yield | |||
|---|---|---|---|---|---|---|
| 1 | H | 15 | 40 | |||
| 2 | H | CH2OAc | 5 | 41 | ||
| 3 | H | 16 | 50 | |||
| 4 | H | 24 | 82 | |||
| 5 | H | C(Me)2CH2OTBDPS | 20 | 72 | ||
| 6 | H | C(Me)2OH | 16 | 41 | ||
| 7 | H | cyclohexenyl | 23 | 67 | ||
| 8 | Me | 18 | 53 | |||
| 9 | CO2Me | 17 | 48 | |||
| 10 | Me | cyclohexenyl | 19 | 50 |
Taken (in part) from Cruz, F. Development of cascade reactions catalyzed by Palladium and their application to the synthesis of heterocycles, Ph.D. Thesis, Universidade de Vigo, 2019. Reaction conditions: N-PMB-2-alkynylaniline 9, alkene 3 (6 equiv), PdCl2(PPh3)2 (10 mol %), TPPO (10 mol %), and KI (0.5 equiv) in DMF (10 mL/mmol) under air.
Isolated yield (%).
A 3-unsubstituted indole 11d (R1 = H; R2 = t-Bu) was also obtained in 17% yield.
Scheme 3Preparation of a 2-Unsubstituted Dehydrotryptophan Derivative
Effect of the Alkene and PPh3 on Yields and Coupling/Cycloisomerization Ratiosa
| entry | Y | R2 | [Pd] | Yield of | ||||
|---|---|---|---|---|---|---|---|---|
| 1 | NHAc | PdCl2 | 100 | 18 | 39 | 1:1 | ||
| 2 | NHAc | PdCl2(PPh3)2 | 100 | 7 | 63 | 4:1 | ||
| 3 | H | PdCl2 | 80 | 20 | 56 | 1.4:1 | ||
| 4 | H | PdCl2 | 100 | 20 | 85 | only | ||
| 5 | H | PdCl2(PPh3)2 | 80 | 19 | 90 | only | ||
| 6 | H | PdCl2(PPh3)2 | 100 | 18 | 91 | only | ||
| 7 | NHAc | PdCl2(PPh3)2 | 100 | 4 | 20 | |||
| 8 | H | PdCl2(PPh3)2 | 100 | 18 | 52 | only | ||
| 9 | Me | PdCl2(PPh3)2 | 60 | 20 | 67 | only | ||
| 10 | NHAc | PdCl2(PPh3)2 | 100 | 20 | ||||
| 11 | NHAc | PdCl2 | 100 | 20 | ||||
| 12 | NHAc | 100 | 4 |
Reaction conditions: Unless otherwise indicated, 1a or 1b, a Pd complex (5 mol %), KI (0.5 equiv) and alkene (6 equiv) in DMF under air atmosphere.
Isolated yield (%).
Measured in the crude reaction mixture.
Ratio of isolated yields.
Reference (14).
Not determined due to signal overlap.
Reaction run in the absence of alkene. The cycloisomerization product 6a was obtained in 28% yield (entry 10) or 15% yield (entry 11).
Experiment run in the absence of alkene and Pd catalyst: No reaction.
Scheme 4Expected Catalytic Cycle
Energy Differences [in kcal/mol; WB97XD/def2SVPP_LANL2DZ(SMD, DMF)//B97XD/def2TZVP (SMD, DMF)] for the Stepwise Transformation of B to G
| 1 | H, Ph | PPh3 | H | 18.7 | –10.1 | –0.7 | 7.5 | –27.2 | 6.8 | 28.2 | 18.4 | 7.3 | 0.3 |
| 2 | H, Ph | DMF | H | 13.9 | –33.6 | 10.5 | 12.7 | –14.8 | 23.2 | 15.2 | 6.2 | 17.3 | 12.9 |
| 3 | H, Ph | PPh3 | Me | 18.7 | –10.1 | 2.2 | 6.7 | –23.0 | 8.9 | ||||
| 4 | H, Ph | PPh3 | NHAc | 18.7 | –10.1 | 6.0 | 16.9 | –26.0 | 22.9 | 26.5 | 18.3 | 4.4 | 1.3 |
| 5 | H, Me | PPh3 | NHAc | 19.1 | –9.0 | 7.7 | 16.6 | –32.8 | 24.3 | 29.9 | 24.2 | 4.9 | –2.9 |
| 6 | H, | PPh3 | NHAc | 17.8 | –8.2 | 10.0 | 14.9 | –32.6 | 24.9 | 29.1 | 24.5 | 3.5 | –1.8 |
| 7 | CO2Me, Ph | PPh3 | NHAc | 20.4 | 9.2 | –6.3 | 18.1 | –27.1 | 10.8 | 31.1 | 24.1 | 2.7 | –1.9 |
| 8 | CO2Me, | PPh3 | NHAc | 21.8 | 12.5 | 2.9 | 16.3 | –28.6 | 19.2 | 30.2 | 26.2 | 2.1 | –4.9 |
27.0 kcal/mol from the lowest energy intermediate E (see Figure ).
18.1 kcal/mol from D (see Figure ).
Figure 1(a) Reaction profile starting from complexes B derived from A (R1 = H, R2 = Ph in Scheme ) and methyl α-acetamidoacrylate (Y = NHAc) or methyl acrylate (Y = H) in a reaction promoted by PdCl2/L (L = PPh3 or DMF) [energy values in kcal/mol; WB97XD/def2SVPP_LANL2DZ(SMD, DMF)//B97XD/def2TZVP (SMD, DMF)]. (b) Ground state structures of intermediates involved in the reaction profile.
Figure 2(a) Reaction profile starting from complexes B derived from A (R1 = CO2Me, R2 = Ph, L = PPh3 in Scheme ) and methyl α-acetamidoacrylate in a reaction promoted by PdCl2(PPh3)2 [energy values in kcal/mol; WB97XD/def2SVPP_LANL2DZ(SMD, DMF)//B97XD/def2TZVP (SMD, DMF)]. (b) 3-D structures of TSs, as representative of those involved in the different series.