Chun Chen1, Eun H Ahn1, Xia Liu1, Zhi-Hao Wang1, Shilin Luo1, Jianming Liao1,2, Keqiang Ye1. 1. Department of Pathology and Laboratory Medicine Emory University School of Medicine Atlanta, Georgia 30322, United States. 2. Department of Neurosurgery, Renmin Hospital, Wuhan University, Wuhan, Hubei Province 430060, China.
Abstract
BDNF/TrkB neurotropic pathway, essential for neural synaptic plasticity and survival, is deficient in neurodegenerative diseases including Alzheimer's disease (AD). Our previous works support that BDNF diminishes AD pathologies by inhibiting delta-secretase, a crucial age-dependent protease that simultaneously cleaves both APP and Tau and promotes AD pathologies, via Akt phosphorylation. Small molecular TrkB receptor agonist 7,8-dihydroxyflavone (7,8-DHF) binds and activates the receptor and its downstream signaling, exerting therapeutic efficacy toward AD. In the current study, we optimize 7,8-DHF pharmacokinetic characteristics via medicinal chemistry to obtain a synthetic derivative CF3CN that interacts with the TrkB LRM/CC2 domain. CF3CN possesses improved druglike features, including oral bioavailability and half-life, compared to those of the lead compound. CF3CN activates TrkB neurotrophic signaling in primary neurons and mouse brains. Oral administration of CF3CN blocks delta-secretase activation, attenuates AD pathologies, and alleviates cognitive dysfunctions in 5xFAD. Notably, chronic treatment of CF3CN reveals no demonstrable toxicity. Hence, CF3CN represents a promising preclinical candidate for treating the devastating neurodegenerative disease.
BDNF/TrkB neurotropic pathway, essential for neural synaptic plasticity and survival, is deficient in neurodegenerative diseases including Alzheimer's disease (AD). Our previous works support that BDNF diminishes AD pathologies by inhibiting delta-secretase, a crucial age-dependent protease that simultaneously cleaves both APP and Tau and promotes AD pathologies, via Akt phosphorylation. Small molecular TrkB receptor agonist 7,8-dihydroxyflavone (7,8-DHF) binds and activates the receptor and its downstream signaling, exerting therapeutic efficacy toward AD. In the current study, we optimize 7,8-DHF pharmacokinetic characteristics via medicinal chemistry to obtain a synthetic derivative CF3CN that interacts with the TrkB LRM/CC2 domain. CF3CN possesses improved druglike features, including oral bioavailability and half-life, compared to those of the lead compound. CF3CN activates TrkB neurotrophic signaling in primary neurons and mouse brains. Oral administration of CF3CN blocks delta-secretase activation, attenuates AD pathologies, and alleviates cognitive dysfunctions in 5xFAD. Notably, chronic treatment of CF3CN reveals no demonstrable toxicity. Hence, CF3CN represents a promising preclinical candidate for treating the devastating neurodegenerative disease.
Alzheimer’s disease (AD) is the most common neurodegenerative disease. Its hallmark
pathologic features include intraneuronal neurofibrillary tangles (NFTs), composed of
hyperphosphorylated and truncated Tau, and extracellular senile plaques consisting of
amyloid β (Aβ) peptides. In addition to senile plaques and NFT deposition,
microglia activation associated with extensive neuroinflammation and massive neural cell
death are also the prominent pathological characteristics for AD.[1]
Amyloid β peptides are generated from amyloidogenic cleavage of APP (amyloid precursor
protein), which is sequentially truncated by BACE1 (β-secretase 1) and
γ-secretase.[2] Recently, we have reported that AEP (asparagine
endopeptidase, gene name legumain: LGMN) acts as delta-secretase that simultaneously cleaves
both APP and Tau and promotes amyloid deposition and NFT pathologies in
AD.[3,4]
Delta-secretase shreds APP at N373 and N585 sites and allows BACE1 readily to get access to
the truncated APP C-terminal fragment (amino acids (a.a.) 586–695, C110), escalating
Aβ peptide production. Knockout of AEP from 5xFAD mice diminishes amyloid aggregation,
attenuating cognitive disorders. APP N585 fragment is also detectable and enhanced in human
AD patient brains.[4] Delta-secretase cuts Tau at N255 and N368 residues
and abolishes its microtubule binding capabilities, facilitating its aggregation and
neurotoxicities. Deletion of delta-secretase from Tau P301S mice substantially mitigates
Tauopathies, rescuing cognitive dysfunctions.[3] Remarkably, Tau N368 is
highly increased in AD patient brains and CSF, fitting with intensified Tau PET images in AD
brains.[5] Thus, these studies demonstrate that delta-secretase might be
an innovative drug target for treating AD. Accordingly, we performed a high throughput
screening (HTS) and identified a promising small molecular inhibitor against
delta-secretase. As expected, lead compound no. 11 potently blocks delta-secretase
activation, revealing a potential therapeutic effect for treating AD.[6]
Interestingly, delta-secretase also cleaves human α-Synuclein (α-Syn), a
principal component in Parkinson’s disease (PD)-associated Lewy bodies.
Delta-secretase cuts α-Syn at N103 residue and augments its fibrillization and
neurotoxicities. Inactivation of delta-secretase abolishes α-SNCA A53T-induced
PD.[7]Neurotrophins are a family of growth factors that regulate neuronal survival, development,
and differentiation. There are four related proteins, including the brain-derived
neurotrophic factor (BDNF), the nerve growth factor (NGF), neurotrophin-3 (NT-3), and
neurotrophin-4 (NT-4/5). Neurotrophins trigger the trophic effects via the cognate Trk
receptors. Upon BDNF binding to TrkB receptors, it elicits the receptor dimerization and
autophosphorylation on numerous tyrosine residues in the TrkB intracellular domain, leading
to the activation of downstream signaling pathways including PI3K/Akt, Ras/Raf/MAPK, and
PLC-γ1.[8] BDNF expression is reduced in the brains of different
neurodegenerative diseases. For instance, BDNF mRNA and protein expression are decreased in
multiple brain areas of AD post-mortem.[9,10] Neurons containing NFT do not contain BDNF
immune-reactivity, whereas intense BDNF immune-reactivity neurons are devoid of
tangles,[11] suggesting that BDNF may play a protective role against AD
pathogenesis. Most recently, we have reported that BDNF-mediated Akt could directly
phosphorylate delta-secretase on T322 residue and blocks its activation, sequestering its
lysosomal residency. BDNF scarcity in neurodegenerative diseases leads to reduction of
phosphorylation, cytoplasmic translocation and subsequent activation of delta-secretase,
eliciting its autocleavage and pathological substrates truncation.[12]
Exogenous application of BDNF has been documented to improve the learning and memory ability
of a demented animal.[13] Studies in AD models show that BDNF plays a
neuroprotective role against Aβ toxicity. Exogenous BDNF administration in primary
neurons and in vivo reduces levels of murine Aβ.[14]
Furthermore, application of BDNF in vitro dephosphorylates Tau protein via
the TrkB signaling pathway,[15] indicating a neuroprotective role in the
development of Tau pathology. Consequently, BDNF gene delivery has been shown as a novel
potential therapeutic approach in diverse AD models.[16] Thus, preclinical
evidence supports that BDNF administration might be a therapeutic agent for a variety of
neurological disorders. However, the outcomes of several clinical trials using recombinant
BDNF are disappointing. Presumably, this is due to poor delivery and the short in
vivo half-life of BDNF.[17−19]Employing a cell-based screening, we identified that 7,8-dihydroxyflavone (7,8-DHF)
specifically binds to the extracellular domain of TrkB receptor and acts as a selective TrkB
receptor agonist, which mimics the physiological functions of BDNF.[20,21] Oral administration of 7,8-DHF
activates TrkB receptors in the brains and induces BDNF-like behavioral phenotypes in
rodents in a TrkB-dependent way.[22−24] Several
studies show that 7,8-DHF rescues learning and memory deficits in different AD animal
models. 7,8-DHF inhibits the expression of BACE1 and reduces the levels of Aβ40 and
Aβ42. Therefore, 7,8-DHF represents an innovative oral bioactive therapeutic agent for
treating AD.[25−29] Together,
these studies support that 7,8-DHF shows prominent therapeutic efficacy toward AD through
acting as a TrkB receptor agonist. Nevertheless, 7,8-DHF contains a catechol group that
possesses intrinsic pharmacokinetic (PK) drawbacks including poor oral bioavailability and
short half-life and suboptimal brain exposure. To alleviate these shortcomings, we conducted
an extensive lead optimization campaign via medicinal chemistry
modification,[21,24,30] and gained the structural insight critical for improving
its druggability. In the study, we report that the newly optimized 7,8-DHF derivative
CF3CN robustly binds to the LCM/CC2 motif on TrkB ECD. It displays improved PK
profiles including oral bioavailability and in vivo half-life. Oral
administration of CF3CN strongly activates TrkB receptors and its downstream
signalings, leading to inhibition of delta-secretase by Akt phosphorylation. Noticeably,
CF3CN exhibits a tight PD/PK relationship and exerts promising therapeutic
efficacy in 5xFAD mice in a dose-dependent manner.
Results and Discussion
Organic Synthesis of 7,8-DHF Derivatives
Our previous structure–activity relationship (SAR) study shows that the catechol
group in 7,8-DHF is critical for agonistic activity. The synthetic imidazole derivatives
via the bioisosteric strategy to modify the A ring in 7,8-DHF indicates that these
compounds maintain the TrkB agonistic activity. However, the electron-donor groups in the
B ring make the derivatives metabolically labile, though they enhance their agonistic
potencies.[19,22] To
alleviate the PK shortcomings and optimize the lead compound into an innovative
preclinical candidate, we introduced the electron-withdrawing groups via medicinal
chemistry approaches (Figure A) and synthesized
dozens of derivatives and selected two of the optimal ones to present here. The organic
synthesis routes for the final candidate CF3CN is shown in Figure B.
Figure 1
(A) CF3CN, an optimized 7,8-DHF derivative as a bioisosteric TrkB receptor
agonist. (B) The organic synthesis route for generating CF3CN.
(A) CF3CN, an optimized 7,8-DHF derivative as a bioisosteric TrkB receptor
agonist. (B) The organic synthesis route for generating CF3CN.
CF3CN Activates TrkB and Its Downstream Signaling Pathway in a
Dose-Dependent Manner
One of the major physiological functions of BDNF/TrkB pathways is to promote neuronal
survival. To determine whether the synthetic derivatives specifically activate TrkB and
protect cells from apoptosis in a TrkB-dependent manner, we employed HA-TrkB stably
transfected T48 cells, a murine cell line which originally was derived from basal
forebrain SN56 cells that expressed negligible TrkB. Titration assay revealed that
CF3CN displayed a dose-dependent protection against staurosporine-induced
apoptosis in T48 cells with EC50 around 26.4 nM. By contrast, CF3CN
exhibited much weaker protective effects in TrkB lacking SN56 cells. We conducted the
similar experiments with the human TrkB receptor stably transfected dopaminergic cell line
BR6, which was from SH-SY5Y cells that express negligible TrkB receptors and made the
similar observations. Again, CF3CN protected BR6 cells but not TrkB-deficient
SH-SY5Y cells from STS-induced cell death (Figure A, upper panels). CF3CN selectively protected BR6 but not SH-SY5Y
cells with the IC50 of 103 nM (Figure A, lower panel). Immunoblotting showed that CF3CN gradually
triggered p-TrkB activation in T48 cells as the concentrations progressively increased
(Figure B). CF3CN, like 7,8-DHF,
robustly provoked TrkB activation in BR6 cells, which was barely visible in SH-SY5Y cells
(data not shown). Both CF3CN and 7,8-DHF exhibited the comparable protective
profiles in BR6 cells via MTT assay, whereas neither of them displayed a demonstrable
effect in TrkB-deficient SH-SY5Y cells (Figure 1B,C). To determine whether the synthetic derivatives also stimulate
endogenous TrkB activation in primary neurons, we employed DIV13 primary cortical cultures
and treated the neurons at the indicated doses for 15 min. CF3CN displayed a
dose-dependent effect in triggering TrkB activation, and the downstream p-Akt/p-MAPK
consisted with p-TrkB activities (Figure C).
Hence, CF3CN activates p-TrkB and promotes cell survival in a TrkB-dependent
manner.
Figure 2
CF3CN activates TrkB and its downstream signaling pathway in a
dose-dependent manner. (A) CF3CN protected T48 but not SN56 cells from
STS-induced cell death. MTT assay was performed, and the EC50 value was
calculated on a nanomolar scale with Prism software. (B) CF3CN activated
TrkB and its downtream effectors in T48 cells dose-dependently. (C) CF3CN
activated TrkB dose-dependently in primary neurons.
CF3CN activates TrkB and its downstream signaling pathway in a
dose-dependent manner. (A) CF3CN protected T48 but not SN56 cells from
STS-induced cell death. MTT assay was performed, and the EC50 value was
calculated on a nanomolar scale with Prism software. (B) CF3CN activated
TrkB and its downtream effectors in T48 cells dose-dependently. (C) CF3CN
activated TrkB dose-dependently in primary neurons.
In Vitro ADMET Profilings of CF3CN
To assess the PK profiles for CF3CN, we conducted a panel of in
vitro ADMET assays. Based on in vitro plasma, hepatocyte, and
liver microsomal stability assays, we found that CF3CN is stable (Tables S1–S3) and brain permeable with good intestine absorption
(Tables S4 and S5). Remarkably, CF3CN is water-soluble (Table S6). The plasma protein binding assay showed that CF3CN
demonstrated robust plasma protein binding activities (Tables S7 and S8). The hERG inhibition assay revealed that CF3CN
did not bind to the potassium channel, suggesting that they do not possess any potential
cardiovascular toxicity (Table S9). Together, in vitro ADMET data analysis reveals
that CF3CN is a promising lead compound.
CF3CN Binds to LRM/CC2 Motifs on the TrkB Receptor Extracellular
Domain
To determine whether the synthetic derivative CF3CN directly binds to the TrkB
extracellular domain (ECD), we coupled the recombinant proteins onto the biosensor chip
and monitored the binding by the small molecule to the immobilized TrkB receptor using the
standard biophysical protocol. As expected, CF3CN exhibited a somewhat higher
affinity to TrkB than 7,8-DHF; the Biacore binding assay showed that CF3CN and
7,8-DHF interacted with GST-TrkB ECD with Kd values of 80.2
and 184.5 nM, respectively (Figure A–C).
To map the exact domain on TrkB ECD (a.a. 1–428) implicated in associating with
CF3CN, we purified various truncated GST-tagged TrkB ECD recombinant proteins
including LRM (leucine-rich motif, a.a. 37–111), CC2 (Cysteine Cluster 2, a.a.
112–176), Ig1 (a.a. 182–250), and Ig2 (a.a. 251–340). The proteins
were purified by FPLC with the final concentrations around 0.5 mg/mL. The Biacore binding
assay revealed that 7,8-DHF and CF3CN strongly associated with the LRM domain,
followed by the CC2 domain, and none of them associated with the Ig1 or Ig2 domains (Figure C; Figure S2). These findings are consistent with our previous reports that
7,8-DHF directly interacts with the TrkB ECD around LRM,[20,21] and BDNF interacts with the TrkB LRM domain as
well.[31] Next, we conducted the binding competition assay of 7,8-DHF
with TrkB ECD recombinant proteins in the presence of different concentrations of
CF3CN. The binding between 7,8-DHF and TrkB His-Sumo-LRM/CC2 recombinant
proteins was reduced by gradually escalated CF3CN in a dose-dependent manner
(Figure D), suggesting that these two
compounds occupy the same binding site on TrkB receptors and CF3CN may possess
a stronger binding affinity toward TrkB receptors.
Figure 3
Synthetic derivatives bind to TrkB receptor in Biacore assay. (A) The schematic of
human TrkB-ECD with an N-terminal GST tag. (B) Biacore assay of CF3CN
interaction with purified GST-TrkB ECD recombinant proteins. (C) Biacore binding
assay. 7,8-DHF and CF3CN bind to both TrkB LRM and the CC2 region. (D)
CF3–CN competition with 7,8-DHF binding to TrkB ECD in a
dose-dependent manner.
Synthetic derivatives bind to TrkB receptor in Biacore assay. (A) The schematic of
human TrkB-ECD with an N-terminal GST tag. (B) Biacore assay of CF3CN
interaction with purified GST-TrkB ECD recombinant proteins. (C) Biacore binding
assay. 7,8-DHF and CF3CN bind to both TrkB LRM and the CC2 region. (D)
CF3–CN competition with 7,8-DHF binding to TrkB ECD in a
dose-dependent manner.
In Vivo PK and Brain Exposure of CF3CN and the PD/PK
Relationship
We tested the in vivo PK profiles of CF3-CN after dosing
CF3CN in three ICR mice at 2 mg/kg (intravenous, i.v.) and 5 mg/kg (by mouth,
oral gavage), respectively. Blood samples were drawn from three animals after i.v.
injection at each designated time point (5, 15, and 30 min, 1, 2, 4, 8, and 24 h), and
CF3CN concentrations in all plasma were measured by LC-MS/MS. The
pharmacokinetic analysis was performed by using a noncompartmental method.
CF3CN was gradually decayed and barely detectable at 8 h (blue line) after i.v.
injection. After a single oral administration of CF3CN, the
Cmax and Tmax values for
CF3CN were 11 268 ng/mL and 49.8 min, respectively. The mean value of
area under the curve (AUC)(0-t) was 68 533.8 h ng/mL (Figure A). The mean oral bioavailability value for CF3CN is
approximately 136%. We also delivered an i.v. injection in 12 ICR mice at 2 mg/kg of
CF3CN for in vivo PK/BBB study and harvested brain samples
from three mice after i.v. injection at 1, 2, and 4 h. The concentrations in the brain and
plasma were determined. Following a single i.v. injection at 2 mg/kg, the
Cmax value for CF3CN reached 12 747.9
ng/mL within 5 min in the plasma, while in the brains, the
Cmax and Tmax were 63.3 ng/g and
1 h, respectively (Figure B). Hence,
CF3CN is brain permeable in mice.
Figure 4
In vivo PK study of CF3CN and PD/PK relationship. (A)
In vivo PK study. ICR mice were given 2 mg/kg (i.v.) or 5 mg/kg
(P.O.) CF3-CN, and blood samples were collected from all three mice at indicated time
points. CF3CN was quantitatively analyzed by LC-MS/MS. (B) CF3CN
brain exposure from intravenous administration of CF3CN. Three ICR mice
were given 2 mg/kg CF3CN, which was dissolved in DMSO then resuspended in
95% methylcellulose (0.5%, wt/vol), and the final DMSO concentration is 5% (5%
DMSO/95% methylcellulose, vol/vol). At indicated time points, blood samples were
collected from all three mice. CF3CN was quantitatively analyzed by
LC-MS/MS. (C) Nine ICR mice were given 2 mg/kg CF3CN, which was dissolved
in DMSO then resuspended in 95% methylcellulose (0.5%, wt/vol), and the final DMSO
concentration is 5% (5% DMSO/95% methylcellulose, vol/vol). At indicated time points,
three mice per group were sacrificed, and serum and brain samples were collected.
CF3CN was quantitatively analyzed by LC-MS/MS. (D) Quantitative
Aβ40 and 42 ELISA analysis in the brain lysates at different time points after
oral administration of CF3CN.
In vivo PK study of CF3CN and PD/PK relationship. (A)
In vivo PK study. ICR mice were given 2 mg/kg (i.v.) or 5 mg/kg
(P.O.) CF3-CN, and blood samples were collected from all three mice at indicated time
points. CF3CN was quantitatively analyzed by LC-MS/MS. (B) CF3CN
brain exposure from intravenous administration of CF3CN. Three ICR mice
were given 2 mg/kg CF3CN, which was dissolved in DMSO then resuspended in
95% methylcellulose (0.5%, wt/vol), and the final DMSO concentration is 5% (5%
DMSO/95% methylcellulose, vol/vol). At indicated time points, blood samples were
collected from all three mice. CF3CN was quantitatively analyzed by
LC-MS/MS. (C) Nine ICR mice were given 2 mg/kg CF3CN, which was dissolved
in DMSO then resuspended in 95% methylcellulose (0.5%, wt/vol), and the final DMSO
concentration is 5% (5% DMSO/95% methylcellulose, vol/vol). At indicated time points,
three mice per group were sacrificed, and serum and brain samples were collected.
CF3CN was quantitatively analyzed by LC-MS/MS. (D) Quantitative
Aβ40 and 42 ELISA analysis in the brain lysates at different time points after
oral administration of CF3CN.To explore whether orally administrated CF3CN displays an optimal PD/PK
relationship, we treated 2-month-old 5xFAD mice with a 10 mg/kg dose via oral gavage and
sacrificed the mice and indicated time points. CF3CN exhibited a time-dependent
fluctuation in both the plasma and the brain. CF3CN peaked in both tissues at
0.5 h and started to decay, and it was detectable in the brain at 8 h (Figure C). Quantification of Aβ40 and 42 peptides in the
brains showed that Aβ42 was prominently reduced when CF3CN entered the
brain, and it bounced back at 8 h, when CF3CN was substantially metabolized.
Because the Aβ40 baseline in 5xFAD mice was very low as compared to that of
Aβ42, Aβ40 concentrations were not altered much upon CF3CN
treatment (Figure D). Therefore,
CF3CN dose-dependently decreases Aβ42 in 5xFAD mouse brains, displaying a
tight PD/PK relationship.
CF3CN Alleviates Aβ Deposition and Prevents Synaptic Loss in 5xFAD
Mice
To determine whether oral administration of CF3CN attenuates AD pathologies
and synaptic loss in the brain, we treated 5xFAD mice daily with CF3CN (3 or 10
mg/kg) or vehicle, beginning at 3 months of age. Three months after drug treatment, we
detected the effect of CF3CN treatment on Aβ deposition through
immunohistochemistry (IHC) staining the brain sections with anti-Aβ antibody.
Strikingly, the number of plaques and the plaque area fraction in both cortex and
hippocampus areas were significantly decreased in CF3CN-treated mice as
compared with those of the vehicle group (Figure A,B). We further tested Aβ deposition by immunofluorescent costaining
with anti-Aβ antibody and Thioflavin-S (ThS). The Aβ deposition in both cortex
and hippocampus regions was significantly lower in CF3CN-treated mice than that
in the vehicle group (Figure 3A,B). To verify whether CF3CN inhibits Aβ
production, the concentrations of total Aβ40 and Aβ42 were quantified by
ELISA. Aβ40 but not Aβ42 concentrations were reduced by CF3CN in a
dose-dependent manner (Figure C). Hence, these
results suggest that chronic oral CF3CN may decrease Aβ production and
prevent Aβ deposition.
Figure 5
CF3CN prevents the synaptic loss in the hippocampus of 5xFAD mice. (A)
Immunohistochemistry of Aβ deposits in 5xFAD mice (scale bar, 100 μm). (B)
Quantitative analysis of Aβ positive plaques in vehicle-treated and
CF3CN-treated 5xFAD mouse brains (n = 3, data are shown
as mean ± SEM *** p < 0.001, **** p <
0.0001, two-way ANOVA). (C) Aβ42 and Aβ40 ELISA. CF3-CN did not reduce
soluble Aβ40 or Aβ42 in the mouse brains (n = 3, data are
shown as mean ± SEM ** p < 0.01, two-way ANOVA). (D)
Representative electron microscopy pictures of the synaptic structures. Red circles
indicate the synapses (scale bar, 1 μm). (E) Quantitative analysis of the
synaptic density in vehicle and CF3CN-treated 5xFAD mice. 5xFAD mice showed
decreased synaptic density, which was reversed by CF3CN (n
= 5 in each group, data are shown as mean ± SEM *** p <
0.001, one-way ANOVA). (F) CF3CN reversed the synaptic loss in 5xFAD mice.
The dendritic spines from apical dendritic layer of the CA1 region were analyzed by
Golgi staining (scale bar, 5 μm). (G) Quantitative analysis of the spine
density. The decreased spine density in 5xFAD mice was reversed by CF3CN
treatment (n = 5 in each group, data are shown as mean ± SEM
**** p < 0.0001, one-way ANOVA). (H) Immunoblotting analysis of
synaptic markers in brain from mice treated with vehicle or CF3CN.
CF3CN treatment increased the expression of synaptic markers in 5xFAD
mice. (I) LTP of field excitatory postsynaptic potential (fEPSP) was induced by 3XTBS
(theta-burst-stimulation) (four pulses at 100 Hz, repeated three times with a 200 ms
interval). Shown traces are representative fEPSPs recorded at the time points 1
(vehicle-treated 5xFAD) and 2 (CF3CN-treated 5xFAD mice)
(n = 5 in each group. Data are presented as mean ± SEM.
*p < 0.05, vehicle-treated vs CF3CN-treated
mice).
CF3CN prevents the synaptic loss in the hippocampus of 5xFAD mice. (A)
Immunohistochemistry of Aβ deposits in 5xFAD mice (scale bar, 100 μm). (B)
Quantitative analysis of Aβ positive plaques in vehicle-treated and
CF3CN-treated 5xFAD mouse brains (n = 3, data are shown
as mean ± SEM *** p < 0.001, **** p <
0.0001, two-way ANOVA). (C) Aβ42 and Aβ40 ELISA. CF3-CN did not reduce
soluble Aβ40 or Aβ42 in the mouse brains (n = 3, data are
shown as mean ± SEM ** p < 0.01, two-way ANOVA). (D)
Representative electron microscopy pictures of the synaptic structures. Red circles
indicate the synapses (scale bar, 1 μm). (E) Quantitative analysis of the
synaptic density in vehicle and CF3CN-treated 5xFAD mice. 5xFAD mice showed
decreased synaptic density, which was reversed by CF3CN (n
= 5 in each group, data are shown as mean ± SEM *** p <
0.001, one-way ANOVA). (F) CF3CN reversed the synaptic loss in 5xFAD mice.
The dendritic spines from apical dendritic layer of the CA1 region were analyzed by
Golgi staining (scale bar, 5 μm). (G) Quantitative analysis of the spine
density. The decreased spine density in 5xFAD mice was reversed by CF3CN
treatment (n = 5 in each group, data are shown as mean ± SEM
**** p < 0.0001, one-way ANOVA). (H) Immunoblotting analysis of
synaptic markers in brain from mice treated with vehicle or CF3CN.
CF3CN treatment increased the expression of synaptic markers in 5xFAD
mice. (I) LTP of field excitatory postsynaptic potential (fEPSP) was induced by 3XTBS
(theta-burst-stimulation) (four pulses at 100 Hz, repeated three times with a 200 ms
interval). Shown traces are representative fEPSPs recorded at the time points 1
(vehicle-treated 5xFAD) and 2 (CF3CN-treated 5xFAD mice)
(n = 5 in each group. Data are presented as mean ± SEM.
*p < 0.05, vehicle-treated vs CF3CN-treated
mice).Synaptic loss is associated with cognitive impairment in the early phase of AD.[32] In 5xFAD mice model, significant synaptic loss and behavioral deficits are
detected at 5 months old, while there is no detectable neuronal loss.[33]
We assessed the densities of the synapse in the hippocampus CA1 area in the 5xFAD mice
brains by electron microscopy (EM). Significant reduction in synaptic density was detected
in 5xFAD mice. CF3CN remarkably reversed the synaptic loss at both doses (Figure D,E). We quantified the density of dendritic
spines of pyramidal neurons by Golgi staining. Interestingly, the spine densities were
noticeably rescued by CF3CN treatment as compared to vehicle control (Figure F,G). We further performed immunoblotting by
using the presynaptic marker (synaptotagmin) and postsynaptic markers (PSD95 and
spinophilin). CF3CN treatment reversed the reduction of synaptic markers (Figure H), fitting with EM and Golgi staining
observations. Electrophysiology analysis demonstrated that CF3CN treatment
increased LTP (long-term potentiation) (Figure I), fitting with the augmentation of synapses by CF3CN. These results
suggest that CF3CN inhibits the synaptic loss and improves the synaptic
plasticity in 5xFAD mice.
CF3CN Activates Akt and Inhibits Delta-Secretase Activation and APP and Tau
Proteolytic Cleavage in 5xFAD Mice
To determine whether CF3CN administration activates TrkB receptors in the
brain, we conducted immunoblotting analysis with the brain lysates and found that the TrkB
was notably activated in CF3CN-treated mice as compared with that in the
vehicle group. Quantitative analysis revealed that p-TrkB levels but not total TrkB levels
were significantly elevated upon CF3CN treatment. As expected, TrkB receptors
were more prominently phosphorylated in CF3CN-treated 5xFAD mice than those in
the vehicle control, so were the downstream AKT and MAPK pathways (Figure S4A). This result was also confirmed in the hippocampus by
immunofluorescence staining with anti-p-TrkB Y816 (Figure S4B). Currently, it remains unclear why the signals of
p-TrkB/p-Akt/p-MAPK at the dose of 10 mg/kg were slightly reduced compared to those at the
dose of 3 mg/kg. p-TrkB and its downstream p-Akt/p-MAPK activation by CF3CN
indicate that the brain-penetrated CF3CN engages its target and activates TrkB
neurotrophic pathways in the brain.Recently, we reported that delta-secretase (also called AEP) cleaves both APP and Tau,
driving AD pathogenesis.[3,4] To determine whether CF3CN affects delta-secretase’s
effect in AD pathologies, we performed immunoblotting and detected that mature and active
delta-secretase was decreased by CF3CN, correlating with the reduction of
cleaved APP N373, N585 fragments, and the Tau N368 fragment in 5xFAD mouse brains.
Notably, delta-secretase p-T322 activity was escalated by CF3CN (Figure A). In alignment with the observation that
C/EBPβ repression by CF3CN, the downstream target of inflammatory factor
IL-6 in 5xFAD mouse brains, was reduced by CF3CN (Figure B). The enzymatic assay showed that AEP activities were repressed
by CF3CN. Fitting with these findings, immunofluorescence revealed that
delta-secretase expression in the hippocampus was attenuated by CF3CN (Figure C,D). To further assess APP proteolytic
cleavage activity by delta-secretase, we conducted immunofluorescent costaining on 5xFAD
brain sections with anti-APP C586 and delta-secretase antibodies. APP C586 immuno-reactive
signals were strongly inhibited by CF3CN, coupled with delta-secretase
reduction (Figure E). Furthermore, Tau N368 and
p-Tau (AT8) staining activities were also prominently diminished by CF3CN
(Figure F).
Figure 6
CF3CN alleviates inflammation, inhibits AEP activation, and reduces the
concentrations of AEP-derived APP fragments and Tau fragments. (A) Western blot
showing the processing of APP and Tau by AEP. CF3CN significantly inhibited
AEP activation by phosphorylation of AEP T322, which attenuated Tau and APP cleavage.
(B) Pro-inflammatory cytokine IL-6 was determined by ELISA kit. Chronic
CF3CN treatment significantly decreased the IL-6 production in mice brains
compared with that of the age-related vehicle-treated mice (n = 5 in
each group, data are shown as mean ± SEM **p < 0.01, one-way
ANOVA). (C) AEP enzymatic activity analysis (n = 5 in each group,
data are shown as mean ± SEM, *P < 0.05, **P
< 0.01 compared with vehicle-treated mice brains, one-way ANOVA). (D)
CF3CN repressed AEP expression levels in 5xFAD mice. Immunofluorescence
showing the presence of AEP positive cells in hippocampus of both vehicle- and
CF3CN-treated mice (scale bar, 50 μm). (E) CF3CN
inhibits AEP activation and reduces delta-secretase-derived APP fragments.
Immunofluorescence staining of cortex from 5xFAD mice brains with AEP antibody
(green), cleaved APP C586 fragment antibody (red), and DAPI (blue). (F)
CF3CN inhibits AEP activation and reduces delta-secretase-derived Tau
fragments. Immunofluorescence staining of cortex from 5xFAD mice brain with cleaved
Tau N368 fragment antibody (red), AT8 antibody (green), and DAPI (blue).
CF3CN alleviates inflammation, inhibits AEP activation, and reduces the
concentrations of AEP-derived APP fragments and Tau fragments. (A) Western blot
showing the processing of APP and Tau by AEP. CF3CN significantly inhibited
AEP activation by phosphorylation of AEP T322, which attenuated Tau and APP cleavage.
(B) Pro-inflammatory cytokine IL-6 was determined by ELISA kit. Chronic
CF3CN treatment significantly decreased the IL-6 production in mice brains
compared with that of the age-related vehicle-treated mice (n = 5 in
each group, data are shown as mean ± SEM **p < 0.01, one-way
ANOVA). (C) AEP enzymatic activity analysis (n = 5 in each group,
data are shown as mean ± SEM, *P < 0.05, **P
< 0.01 compared with vehicle-treated mice brains, one-way ANOVA). (D)
CF3CN repressed AEP expression levels in 5xFAD mice. Immunofluorescence
showing the presence of AEP positive cells in hippocampus of both vehicle- and
CF3CN-treated mice (scale bar, 50 μm). (E) CF3CN
inhibits AEP activation and reduces delta-secretase-derived APP fragments.
Immunofluorescence staining of cortex from 5xFAD mice brains with AEP antibody
(green), cleaved APP C586 fragment antibody (red), and DAPI (blue). (F)
CF3CN inhibits AEP activation and reduces delta-secretase-derived Tau
fragments. Immunofluorescence staining of cortex from 5xFAD mice brain with cleaved
Tau N368 fragment antibody (red), AT8 antibody (green), and DAPI (blue).
Chronic Oral Administration of CF3CN Rescues the Learning and Memory
Deficits in 5xFAD Mice
Morris water maze (MWM) tests were performed to test the hippocampus-dependent spatial
memory of 5xFAD mice. The average latency (Figure A,B) and swim path length (Figure C,D) for each of the 5 acquisition days were calculated and plotted. The area
under curve (AUC) of latency in vehicle-treated 5xFAD mice was larger than that in
CF3CN-treated mice, indicating that the learning deficit of 5xFAD mice was
attenuated by CF3CN treatment (Figure B). The swim path distance in 5xFAD mice showed a significant decrease at the
dose of 3 mg/kg and reduction trend by CF3CN at 10 mg/kg with no significant
statistic differences (Figure D). The memory
recall for the platform location was tested when the platform was removed, and the mice
were allowed to search for 60 s. When compared to that of the vehicle group,
CF3CN-treated 5xFAD mice spent a significantly higher percentage of time in
the target quadrant, revealing the rescue of spatial memory impairment (Figure E). All groups of mice displayed comparable swim speeds
(Figure F). Together, our data strongly
support that CF3CN binds and activates TrkB receptors and the downstream
neurotrophic signalings. It mimics the biological actions of BDNF and exerts the promising
therapeutic efficacy toward neurodegenerative diseases including AD.
Figure 7
CF3CN improves the spatial learning and memory of 5xFAD mice.
CF3CN improves the cognitive functions in 5xFAD mice. 5xFAD mice
(n = 8–10/group) orally administrated with control vehicle
or different doses CF3CN were trained in the water maze over 5 days. Shown
are the mean ± SEM latency to mount the escape platform (A), the area under the
curve of latency (AUC latency) (B), the mean ± SEM Swim Path Distance (C), the
Swim Speed (D), and the percentage of time spent in target quandrant (E),
*p < 0.05, **p < 0.01, ***p
< 0.001 compared to vehicle-treated 5xFAD mice, one-way ANOVA.
CF3CN improves the spatial learning and memory of 5xFAD mice.
CF3CN improves the cognitive functions in 5xFAD mice. 5xFAD mice
(n = 8–10/group) orally administrated with control vehicle
or different doses CF3CN were trained in the water maze over 5 days. Shown
are the mean ± SEM latency to mount the escape platform (A), the area under the
curve of latency (AUC latency) (B), the mean ± SEM Swim Path Distance (C), the
Swim Speed (D), and the percentage of time spent in target quandrant (E),
*p < 0.05, **p < 0.01, ***p
< 0.001 compared to vehicle-treated 5xFAD mice, one-way ANOVA.Employing reiterative organic synthesis of 7,8-DHF derivatives and cell-based
TrkB-dependent survival assay and TrkB agonistic activity assays in primary neurons, we
have successfully obtained a novel TrkB agonist CF3CN that possesses a more
robust binding affinity toward the TrkB receptor and a higher potency in activating TrkB
in primary neurons and in mouse brains. Remarkably, this optimized preclinical candidate
displays favorable in vitro ADMET and in vivo PK
profiles. As a pharmacological agent for treating the CNS disorders, CF3CN is
orally bioactive and brain permeable, demonstrating exciting therapeutic efficacy in 5xFAD
mice by strongly mitigating AD pathologies and effectively restoring cognitive functions.
Notably, CF3CN possesses improved druggable features with favorable in
vitro ADMET characteristics and in vivo PK profiles. Chronic
treatment (3 months) with a 10 times higher therapeutic dose of CF3CN
demonstrated that no adverse effects were identified in wild-type mice, supporting that
this compound is chronically safe at least at a dose of 30 mg/kg (Figure S5). Clearly, the optimized lead compound CF3CN meets the
preclinical criteria of safety and efficacy and may be pushed into the development stage
for pharmacologically treating the devastating neurodegenerative diseases.Accumulating evidence shows that BDNF and TrkB levels are markedly decreased in AD.
Furthermore, BDNF (Val66Met) polymorphism is associated with AD risk.[34,35] However, it is still unclear
whether BDNF/TrkB reductions may be mechanistically involved in AD pathogenesis. Employing
5xFAD/TrkB ± mice, Devi and Ohno reported that TrkB reduction exacerbates
Alzheimer’s diseaselike signaling aberrations and memory deficits without affecting
β-amyloidosis in 5xFAD mice.[36] Interestingly, it has been
reported that BDNF induces a dephosphorylation of Tau protein through a PI3K signaling
mechanism.[15] BDNF promotes spine growth and Tau protein expression,
and the knockdown of Tau significantly decreased the spine density in hippocampal
neurons.[37] Both secreted and cellular BDNF levels are attenuated due
to Tau hyperphosphorylation in primary neuronal cultures.[38] BDNF/TrkB
signaling may play an important role in amyloidogenic processing. For example, Aβ
production in cultured cells is reduced by BDNF treatment,[39] while it
is facilitated by BDNF deprivation.[40] By examining AD-type
neuropathology, levels of soluble Aβ and Tau protein or BDNF and TrkB levels
correlate with dementia in the oldest subjects designated as oldest-old. Michalsi et al.
found that soluble Aβ42 and BDNF levels, but not TrkB or soluble Tau levels,
correlate with dementia in the oldest-old in post-mortem Brodmann’s areas 7 and 9
(BA7 and BA9) in 4 groups of subjects >90 years old.[41] Here, we show
that treatment with BDNF mimetic compound that selectively activates TrkB in the CNS
substantially reduces Aβ production, suppressing senile plaque formation in 5xFAD
mice. Mechanistically, we show that BDNF represses the amyloidogenic pathway via the
blockade of delta-secretase, which is phosphorylated by CF3CN-activated Akt in
primary neurons and mouse brains (Figure ).
Accordingly, APP N585 and Tau N368 proteolytic cleavages by delta-secretase were
conspicuously suppressed, leading to the reduction of Aβ and Tau pathologies (Figure ). The BDNF/TrkB pathway promotes neuronal
survival predominantly via PI3K/Akt signaling. BDNF reduction is associated with
noticeable synaptic loss in AD.[42] Utilizing EM and Golgi staining, we
demonstrate that CF3CN robustly rescues synaptic loss and dendritic spine
reduction in 5xFAD mice, resulting in LTP escalation in CF3CN-treated 5xFAD
mice (Figure ). It is worth noting that
CF3CN treatment also diminishes delta-secretase expression levels in the
hippocampus of 5xFAD (Figure ). One of the
potential mechanisms might be that CF3CN activates the TrkB pathway and
inhibits C/EBPβ, which is a crucial transcription factor for delta-secretase,[43] resulting in repression of LGMN mRNA transcription. As
expected, we found that CF3CN diminished C/EBPβ dose-dependently.
Consequently, inflammatory cytokine IL-6, another downstream target of C/EBPβ, is
reduced as well upon CF3CN treatment (Figure ).In 5xFAD mouse brains, we observe that CF3CN represses the delta-secretase
upstream transcription factor C/EBPβ dose-dependently, leading to delta-secretase
expression suppression. Accordingly, APP and Tau truncation by delta-secretase is reduced,
fitting with delta-secretase enzymatic activities (Figure ). Noticeably, delta-secretase P-T322 by Akt is upregulated upon
CF3CN treatment, in alignment with its effect in activation of
p-TrkB/p-Akt/p-MAPK in 5xFAD (Figure S4). However, it remains unclear why TrkB neurotophic signaling
activities are not escalated in 5xFAD mice by CF3CN dose-dependently, though
its inhibitory effect on delta-secretase and APP/Tau cleavage behaves in a dose-dependent
manner (Figure ). Cognitive behavioral tests
show that CF3CN rescues the cognitive defects in both doses, but it appears
that 3 mg/kg is already saturated (Figure E).
Presumably, the inconsistency might be due to the experimental variation. Because the
animal experiments need a large number of age-matched young 5xFAD mice for chronic drug
treatment, the in vivo experiments have to be conducted at different
times to accumulate sufficient animals.Most recently, we have reported that R13, a synthetic prodrug of 7,8-DHF, exhibits
promising therapeutic efficacy toward AD.[43] R13 optimizes
7,8-DHF’s in vivo PK profiles. Chronic oral administration of R13
activates TrkB signaling and inhibits Aβ deposition in 5xFAD mice, reducing the
pathological cleavage of APP and Tau by delta-secretase. Moreover, R13 inhibits the
synaptic loss and improves memory deficits in a dose-dependent manner, supporting that
prodrug R13 is an optimal therapeutic agent for treating AD.[43] Here, we
employ the bioisosteric strategy and perform a total organic synthesis based on our
previous SAR knowledge about 7,8-DHF’s crucial pharmacophore.[21,24] Now, we have substantially improved
the lead compound’s PK profiles. Utilizing an electron withdrawing group −CN
to replace the electron donor −NR on the B ring, we successfully stabilize the
optimized derivatives by decreasing the metabolism by P450s in liver microsomes and
augmenting its half-life in the circulation system. By introduction of a hydrophobic and
electron withdrawal CF3- group on the imidazole ring, we augment its brain exposure so
that a demonstrable amount of CF3CN could get access to its target TrkB
receptors in the brain. The favorable safety profile and prominent therapeutic efficacy
toward AD make us confident that CF3CN is a promising preclinical candidate for
further drug development. Our study demonstrates that CF3CN represents a novel
disease-modifying and neuroprotective pharmaceutical agent for the treatment of AD.
Clearly, CF3CN is not only useful for exploring the biological actions of
BDNF/TrkB signaling but also providing a disease-modifying pharmacological intervention
for clinical treatment of various neurological diseases including AD.
Materials and Methods
Mice and Reagents
5xFAD mice were obtained from Jackson lab and were bred in accordance with Emory Medical
School guidelines. The 5xFAD mice received vehicle or CF3CN dissolved in 5%
DMSO/0.5% methylcellulose at a dose of 3 or 10 mg/kg/day. Mice were housed in AAALAC
(American Association for Accreditation of Laboratory Animal Care)-Accredited facilities,
and this study was approved by the institutional Animal Care and Use Committees at Emory
University.Anti-TrkB antibody was bought from Biovision (Milpitas, CA). Antiphospho-TrkB Y816
antibody was raised against [H]-CKLQNLAKASPV-pY-LDILG-[OH] (a.a. 806–822) (EM437
and EM438) as rabbit polyclonal antibody. Anti-synaptotagmin, anti-Aβ, and
antitubulin were from Sigma-Aldrich (St Louis, MO). Anti-Akt, anti-p-Akt, anti-ERK,
anti-p-ERK1/2, anti-synapsin I, anti-PSD95, and antispinophilin antibodies were bought
from Cell Signaling (Boston, MA). The Histostain-SP kit and the Aβ 1-42 ELISA kit
was from Invitrogen (Grand Island, NY). All chemicals not included above were purchased
from Sigma-Aldrich.
BIAcore X100 Binding Assay
7,8-DHF solution was prepared in 20% DMSO + 80% 100 mM Tris–HCl (pH 4.0) (v/v).
Purified TrkB ECD proteins (ECD, LRM, CC2, Ig1, Ig2) were reconstituted, respectively, to
a concentration of 50 μg/mL in 10 mM sodium acetate (pH 4.0). The carboxylated
dextran matrix on the sensor chip was activated by the injection of 60 μL of
activation buffer prepared from the kit composed of 0.2 M
N-ethyl-N′-(3-(dimethylamino)propyl) carbodiimide and 0.05 M
N-hydroxysuccimide in water. NaOH (75 μL of 50 mM) was employed
for chip regeneration followed by applying the maximum volume of deionized water and
running buffer (HEPES + EDTA + P20) (BIAcore, GE healthcare) according to the manual. The
running time of the immobilization step was 180 s. The remaining binding sites on the
sensor chip were blocked with 1 M ethanolamine, pH 8.5. To test the binding affinity
between 7,8-DHF and different domains of TrkB ECD (LRM, LRM-CC2, Ig2, and CC1-CC2), 200
μM of 7,8-DHF solution was injected onto the derivatized sensor chip. Regeneration
of the CM5 sensor chip after each analysis cycle was performed by injecting 20 μL of
1.5 M glycine/HCl buffer pH 3.5 and 6 M guanidinium HCl pH 5.5. BIAevaluation software was
used for Kd value analysis after the kinetics assay.
Primary Neuronal Cultures
All pregnant rats were purchased from the Jackson Laboratory. Primary cortical neurons
were isolated from embryonic E18 Sprague–Dawley rats. Briefly, tissues were
dissected, dissociated, and incubated with D-Hanks containing 0.25% trypsin for 5 min,
centrifuged at 1000 × g for 5 min after addition of the neuronal
plating medium containing DMEM/F12 with 10% fetal bovine serum. Then, the cells were
resuspended, about 5 × 105 cells were plated onto each well of 12-well plates. The
neurons were cultured into a humidified incubator with 5% CO2 at 37 °C. The medium
was changed to neurobasal medium supplemented with 2% B27 (maintenance medium) after
2–4 h. Neurons at 13 days in vitro (DIV 13) were treated with
different doses of CF3CN (0, 1, 5, 10, 50, 100, 500 nM) for 24 h. Then, the
cells were harvested for Western blotting.
Cell Viability Assay
SH-SY5Y and Br6 cell lines were obtained from the laboratory of Garrett M.
Brodeur’s lab (Children’s Hospital of Philadelphia). Mouse septal neuron
× neuroblastoma hybrids SN56 cells were created by fusing N18TG2 neuroblastoma cells
with murine (strain C57BL/6) neurons from postnatal day 21-septa. Our lab prepared stably
transfected TrkB cell lines T48, which originally were derived from SN56 cells. Cell
cytotoxicity was assessed in vitro using the
3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. Cells were
treated with different doses of CF3CN (0, 1, 5, 10, 50, 100, 500, 1000,
10 000 nM) for 24 h. After the incubation period, the MTT labeling reagent (final
concentration 0.5 mg/mL) was added to each well and incubated for 2 h. The formazan
product was dissolved with DMSO, and the absorbance of the formazan product was read using
a microplate reader at a wavelength of 490 nm.
Golgi Staining
Mice brains were first fixed in 4% paraformaldehyde for 24 h and then soaked in 3%
potassium bichromate buffer for 3 days in the dark. Then, the brains were transferred into
2% silver nitrate solution and incubated for 7 days in the dark. Slices were cut at 50
μm by Vibratome. Only spines that emerged perpendicular to the dendritic shaft were
counted for quantification of spin density.
Aβ Plaque Staining
Amyloid plaques were stained with Thioflavin-S. Free-floating brain slices were stained
with 0.0125% Thioflavin-S for 5 min. The sections were washed in PBST for 15 min, three
times. Then, the sections were covered with a glass cover using mounting solution.
Aβ ELISA
To detect the Aβ concentration in 5xFAD, the mice brains were homogenized in 8X
mass of 5 M guanidine HCl/50 mM Tris HCl (pH 8.0) and incubated at room temperature for 3
h. The supernatant was analyzed by human Aβ40 and Aβ42 ELISA kit according to
the manufacturer’s instructions (KHB3481 and KHB3441, respectively,
Invitrogen).
Morris Water Maze
Mice were trained in a round, water-filled tub (52 in. diameter) in an environment rich
with extra maze cues. Each subject was given 3 trails/day for 5 consecutive days with a 15
min intertrial interval. The maximum trial length was 60 s, and if subjects did not reach
the platform in the allotted time, they were manually guided to do it. Following the 5
days task acquisition, a probe trial was presented, during which time the platform was
removed. All trials were analyzed for latency and swim speed by means of MazeScan (Clever
Sys, Inc.).
Statistical Analysis
All data are expressed as mean ± SEM from three or more independent experiments, and
the level of significance between two groups was assessed with Student’s
t test. For more than two groups, one-way ANOVA followed by the LSD
post hoc test was applied. A value of p < 0.05 was considered to be
statistically significant.
Organic Synthesis of CF3CN
General
All reagents were commercial and were used without further purification. Silica gel TLC
plates (Qing Dao Marine Chemical Factory, Qingdao, China) were used to monitor the
progression of the reactions. Flash column chromatography was performed using silica gel
(300–400 mesh size, Qing Dao Marine Chemical Factory, Qingdao, China). All
reactions were monitored by thin-layer chromatography (TLC) and LCMS. 1H NMR
spectra were recorded on a Bruker Avance III 400 MHz and Varian Mercury Plus 400 MHz,
and TMS was used as an internal standard. LCMS was taken on a quadrupole mass
spectrometer on an Agilent LC/MSD 1200 Series (column: BP-C18 (50 mm × 4.6 mm, 5
μm) operating in ES (+) or (−) ionization modes; T = 30
°C; flow rate = 1.5 mL/min; detected wavelength = 254 nm).Reagents and conditions: (a) Ac2O, pyridine, DCM, 0 °C, 3 h; (b)
AlCl3, 180 °C, 3 h; (c) H2SO4, HNO3,
0 °C, 30 min; (d) BnBr, K2CO3, ACN, 70 °C, overnight;
(e) DMSO, NH3·H2O, 50 °C, 2 h; (f) DCM, BBr3,
rt, 2 h; (g) 4-formylbenzonitrile, DMF, NaH, rt, 5 h; (h) DMSO, I2, 130
°C, 1 h; (i) DMF, TFAA, rt, 3 h; (j) MeOH, Fe, 50 °C, overnight.
Preparation of CF3CN (Figure B)
R 2
To a solution of R 1 (200 g, 1.57 mol) in DCM (2 L), pyridine (155 g, 1.96
mol) and Ac2O (200 g, 1.96 mol) were added at 0 °C. The mixture was
stirred at 0 °C for 3 h. Ice–water (2 L) was added. The mixture was
extracted with DCM (1000 mL × 2), and the combined organic layer was washed with
brine, dried over Na2SO4, and evaporated in a vacuum to give R
2 (190 g, yield 69%) as a red oil. 1H NMR (CDCl3,
400 MHz): δ (ppm) 2.29 (s, 3H), 6.84–6.96 (m, 3H), 7.29–7.37 (m,
1H).
R 3
A mixture of R 2 (190 g, 1.23 mol) and AlCl3 (295 g, 2.22 mol)
was stirred at 180 °C for 3 h under N2 atmosphere. The mixture was
cooled to room temperature and cold water (1 L) was added, it was extracted with DCM
(1000 mL × 2). The combined organic layer was washed with brine (1000 mL), dried
over Na2SO4, and evaporated in vacuum to give the crude product
which was purified by column chromatography on silica gel to give R 3 (104
g, yield 67.5%) as a white solid. 1H NMR (CDCl3, 400 MHz): δ
(ppm) 2.62 (s, 3H), 6.63–6.69 (m, 2H), 7.73–7.79 (m, 1H), 12.60 (s,
1H).
R 4
To a solution of concentrated (conc.) H2SO4 (400 mL), R
3 (100 g, 0.65 mmol) was added at 0 °C. The conc. HNO3
(66 mL) was added to the mixture dropwise at 0 °C for 30 min. After addition,
ice–water (2 L) was added. The mixture was extracted with EtOAc (500 mL ×
2). The combined organic layer was washed with brine (1000 mL), dried over
Na2SO4, and evaporated in vacuum to give the
residue which was purified by column chromatography on silica gel (eluent: petroleum
ether/ethyl acetate = 10/1–3/1) to give R 7 (45 g, yield 35%) as a
yellow solid. 1H NMR (CDCl3, 400 MHz): δ (ppm) 2.67 (s, 3H),
6.77–6.83 (t, J = 9.0 Hz, 1H), 7.90–7.95 (dd,
J = 9.0, 6.3 Hz, 1H), 13.30 (s, 1H).
R 5
A solution of R 4 (10 g, 0.05 mol), K2CO3 (13.8 g,
0.1 mol), and BnBr (9.35 g, 0.055 mol) in ACN (100 mL) was stirred at 70 °C
overnight. The mixture was concentrated and then diluted with water (100 mL). The
mixture was extracted with EtOAc (100 mL × 2). The combined organic layer was
washed with water (200 mL) and brine (200 mL), dried over Na2SO4,
and evaporated in vacuum to give R 5 (6 g, yield 41.4%) as yellow solid.
1H NMR (CDCl3, 400 MHz): δ (ppm) 2.56 (s, 3H), 5.06 (s,
2H), 7.08–7.11 (t, J = 8.7 Hz, 1H), 7.36–7.41 (m, 5H),
7.77–7.82 (dd, J = 9.0, 6.3 Hz, 1H).
R 6
To a solution of R 5 (10 g, 34.6 mmol) in DMSO (50 mL),
NH3.H2O was added dropwise at rt. The reaction was stirred at 50
°C for 1 h. The mixture was poured into water (60 mL) and extracted with EtOAc (50
mL × 2). The combined organic layer was washed with water (100 mL × 3) and
brine (100 mL × 2), dried over Na2SO4, and filtered. The
filtrate was concentrated to give crude R 6 (7.2 g, yield 83.6%) as a red
oil. 1H NMR (CDCl3, 400 MHz): δ (ppm) 2.52 (s, 3H), 5.00 (s,
2H), 5.35 (s, 2H), 6.58–6.60 (d, J = 8.8 Hz, 1H),
7.37–7.44 (m, 5H). 7.69–7.70 (d, J = 8.8 Hz, 1H).
R 7
To the solution of R 6 (8 g, 28 mmol) in DCM (80 mL), boron tribromide was
added dropwise at −78 °C. The reaction was stirred at rt for 2 h. MeOH was
added dropwise to the above mixture at 0 °C. The reaction was diluted with water
(100 mL) and extracted with EtOAc (50 mL × 2). The organic layer was washed with
water (100 mL) and brine (100 mL), dried over Na2SO4, and
concentrated in vacuum to give crude product which was triturated with EtOAc to give R
7 (3 g, yield 37%) as a yellow solid. 1H NMR
(CDCl3, 400 MHz): δ (ppm) 2.70 (s, 3H), 8.01–8.04 (d,
J = 12.2 Hz, 2H).
R 8
To a solution of compound 7 (3 g, 15.3 mmol) in DMF (30 mL), NaH (1.8 g,
45.9 mmol) was added batchwise at 0 °C, and the mixture was stirred at room
temperature for 0.5 h. The solution of 4-formylbenzonitrile (3.93 g, 30 mmol) in DMF (5
mL) was added to the above solution dropwise at 0 °C. The mixture was stirred at
r.t for 3 h. The mixture was quenched with water and filtered, the filtrate cake was
dried in vacuum to give R 8 (2.2 g, yield 49%) as a yellow
solid. 1H NMR (CDCl3, 400 MHz): δ (ppm) 6.49–6.52 (d,
J = 9.2 Hz, 1H), 7.68 (s, 2H), 7.82–7.86 (d,
J = 15.2 Hz, 1H), 7.93–7.95 (d, J = 8 Hz,
2H), 8.07–8.12 (m, 3H), 8.23–8.25 (d, J = 9.2 Hz,
1H).
R 9
To a solution of compound 8 (2.2 g, 7.12 mmol) in DMSO (10 mL),
I2 (270 mg, 1.07 mmol) was added in one batch. The mixture was stirred at
130 °C for 1 h. The mixture was cooled to room temperature and quenched with
ice–water (100 mL). The precipitate was filtered, and the filtrate cake was
triturated with MeOH (10 mL × 2) to give R 9 (1.1 g, yield 50%) as a
yellow solid. 1H NMR (CDCl3, 400 MHz): δ (ppm)
6.99–7.02 (d, J = 9.2 Hz, 1H), 7.23 (s, 1H), 7.87–7.90
(d, J = 9.2 Hz, 2H), 8.07–8.09 (d, J = 8.8 Hz,
2H), 8.21–8.23 (d, J = 8.8 Hz, 2H).
R 10
To a mixture of compound 9 (500 mg, 1.63 mmol) in pyridine (10 mL), TFAA
(1.03 g, 4.89 mmol) was added dropwise at 0 °C, and the mixture was stirred at room
temperature for 2 h. The mixture was diluted with water (10 mL) and extracted with EtOAc
(10 mL × 2). The organic layer was washed with HCl (0.5 M, 10 mL) and brine (100
mL), dried over Na2SO4, and concentrated in vacuum to give R
10 (405 mg, yield 66.7%) as a yellow solid. 1H NMR
(CDCl3, 400 MHz): δ (ppm) 7.38 (s, 1H), 7.74–7.76 (d,
J = 8.4 Hz, 1H), 8.09–8.17 (m, 4H), 8.28–8.30 (d,
J = 8.8 Hz, 1H).
CF3CN
To a solution of R 10 (405 mg, 1.09 mmol) and Fe (304 mg, 5.4 mmol) in
MeOH (10 mL), HAc (5 mL) was added in portions. The mixture was stirred at 50 °C
for 2 h. The mixture was filtered; the filtrate was poured into water (20 mL) and
extracted with EtOAc (20 mL × 2). The combined organic layer was washed with water
(20 mL × 2) and brine (20 mL x 2), dried over Na2SO4, and
filtered. The filtrate was concentrated to give crude product which was purified by
prep-HPLC to give CF3CN (300 mg, yield 77.9%) as a yellow solid.
1H NMR (DMSO-d6, 400 MHz): δ (ppm) 7.33 (s,
1H), 7.75–7.77 (d, J = 8.8 Hz, 1H), 7.98–8.00 (d,
J = 8.8 Hz, 1H), 8.10–8.12 (d, J = 8.4 Hz,
2H), 8.37–8.39 (d, J = 7.6 Hz, 2H); purity > 98% at 220 nm,
MS (ESI) m/z = 356.1 [M + H]+.
Authors: Carmela Matrone; Maria Teresa Ciotti; Delio Mercanti; Roberta Marolda; Pietro Calissano Journal: Proc Natl Acad Sci U S A Date: 2008-08-26 Impact factor: 11.205
Authors: M G Murer; F Boissiere; Q Yan; S Hunot; J Villares; B Faucheux; Y Agid; E Hirsch; R Raisman-Vozari Journal: Neuroscience Date: 1999 Impact factor: 3.590
Authors: Sung-Wuk Jang; Xia Liu; Manuel Yepes; Kennie R Shepherd; Gary W Miller; Yang Liu; W David Wilson; Ge Xiao; Bruno Blanchi; Yi E Sun; Keqiang Ye Journal: Proc Natl Acad Sci U S A Date: 2010-01-25 Impact factor: 11.205
Authors: Zhentao Zhang; Mingke Song; Xia Liu; Seong Su Kang; Duc M Duong; Nicholas T Seyfried; Xuebing Cao; Liming Cheng; Yi E Sun; Shan Ping Yu; Jianping Jia; Allan I Levey; Keqiang Ye Journal: Nat Commun Date: 2015-11-09 Impact factor: 14.919