Literature DB >> 34080105

RetFluidNet: Retinal Fluid Segmentation for SD-OCT Images Using Convolutional Neural Network.

Loza Bekalo Sappa1, Idowu Paul Okuwobi1, Mingchao Li1, Yuhan Zhang1, Sha Xie1, Songtao Yuan2, Qiang Chen3.   

Abstract

Age-related macular degeneration (AMD) is one of the leading causes of irreversible blindness and is characterized by fluid-related accumulations such as intra-retinal fluid (IRF), subretinal fluid (SRF), and pigment epithelial detachment (PED). Spectral-domain optical coherence tomography (SD-OCT) is the primary modality used to diagnose AMD, yet it does not have algorithms that directly detect and quantify the fluid. This work presents an improved convolutional neural network (CNN)-based architecture called RetFluidNet to segment three types of fluid abnormalities from SD-OCT images. The model assimilates different skip-connect operations and atrous spatial pyramid pooling (ASPP) to integrate multi-scale contextual information; thus, achieving the best performance. This work also investigates between consequential and comparatively inconsequential hyperparameters and skip-connect techniques for fluid segmentation from the SD-OCT image to indicate the starting choice for future related researches. RetFluidNet was trained and tested on SD-OCT images from 124 patients and achieved an accuracy of 80.05%, 92.74%, and 95.53% for IRF, PED, and SRF, respectively. RetFluidNet showed significant improvement over competitive works to be clinically applicable in reasonable accuracy and time efficiency. RetFluidNet is a fully automated method that can support early detection and follow-up of AMD.
© 2021. Society for Imaging Informatics in Medicine.

Entities:  

Keywords:  Age-related macular degeneration (AMD); Intra-retinal fluid (IRF); Pigment epithelial detachment (PED); Retinal edema; Spectral-domain optical coherence tomography (SD-OCT); Subretinal fluid (SRF)

Mesh:

Year:  2021        PMID: 34080105      PMCID: PMC8329142          DOI: 10.1007/s10278-021-00459-w

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.903


  25 in total

1.  Age-related macular degeneration is the leading cause of blindness...

Authors:  Neil M Bressler
Journal:  JAMA       Date:  2004-04-21       Impact factor: 56.272

2.  Kernel regression based segmentation of optical coherence tomography images with diabetic macular edema.

Authors:  Stephanie J Chiu; Michael J Allingham; Priyatham S Mettu; Scott W Cousins; Joseph A Izatt; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2015-03-09       Impact factor: 3.732

Review 3.  Central serous chorioretinopathy: Recent findings and new physiopathology hypothesis.

Authors:  Alejandra Daruich; Alexandre Matet; Ali Dirani; Elodie Bousquet; Min Zhao; Nicolette Farman; Frédéric Jaisser; Francine Behar-Cohen
Journal:  Prog Retin Eye Res       Date:  2015-05-27       Impact factor: 21.198

4.  Deep-learning based, automated segmentation of macular edema in optical coherence tomography.

Authors:  Cecilia S Lee; Ariel J Tyring; Nicolaas P Deruyter; Yue Wu; Ariel Rokem; Aaron Y Lee
Journal:  Biomed Opt Express       Date:  2017-06-23       Impact factor: 3.732

5.  ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks.

Authors:  Abhijit Guha Roy; Sailesh Conjeti; Sri Phani Krishna Karri; Debdoot Sheet; Amin Katouzian; Christian Wachinger; Nassir Navab
Journal:  Biomed Opt Express       Date:  2017-07-13       Impact factor: 3.732

6.  Deep learning approach for the detection and quantification of intraretinal cystoid fluid in multivendor optical coherence tomography.

Authors:  Freerk G Venhuizen; Bram van Ginneken; Bart Liefers; Freekje van Asten; Vivian Schreur; Sascha Fauser; Carel Hoyng; Thomas Theelen; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2018-03-07       Impact factor: 3.732

7.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

8.  UNet++: A Nested U-Net Architecture for Medical Image Segmentation.

Authors:  Zongwei Zhou; Md Mahfuzur Rahman Siddiquee; Nima Tajbakhsh; Jianming Liang
Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)       Date:  2018-09-20

9.  Automatic Subretinal Fluid Segmentation of Retinal SD-OCT Images With Neurosensory Retinal Detachment Guided by Enface Fundus Imaging.

Authors:  Menglin Wu; Qiang Chen; XiaoJun He; Ping Li; Wen Fan; SongTao Yuan; Hyunjin Park
Journal:  IEEE Trans Biomed Eng       Date:  2017-04-18       Impact factor: 4.538

10.  Segmentation of Intra-Retinal Cysts From Optical Coherence Tomography Images Using a Fully Convolutional Neural Network Model.

Authors:  G N Girish; Bibhash Thakur; Sohini Roy Chowdhury; Abhishek R Kothari; Jeny Rajan
Journal:  IEEE J Biomed Health Inform       Date:  2018-02-28       Impact factor: 5.772

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  3 in total

1.  Automatic Segmentation and Measurement of Choroid Layer in High Myopia for OCT Imaging Using Deep Learning.

Authors:  Xiangcong Xu; Xuehua Wang; Jingyi Lin; Honglian Xiong; Mingyi Wang; Haishu Tan; Ke Xiong; Dingan Han
Journal:  J Digit Imaging       Date:  2022-05-17       Impact factor: 4.903

Review 2.  Recent Advanced Deep Learning Architectures for Retinal Fluid Segmentation on Optical Coherence Tomography Images.

Authors:  Mengchen Lin; Guidong Bao; Xiaoqian Sang; Yunfeng Wu
Journal:  Sensors (Basel)       Date:  2022-04-15       Impact factor: 3.847

3.  Chronological Registration of OCT and Autofluorescence Findings in CSCR: Two Distinct Patterns in Disease Course.

Authors:  Monty Santarossa; Ayse Tatli; Claus von der Burchard; Julia Andresen; Johann Roider; Heinz Handels; Reinhard Koch
Journal:  Diagnostics (Basel)       Date:  2022-07-22
  3 in total

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