| Literature DB >> 34069362 |
Nils Christian Lehnen1,2, Robert Haase1,2, Jennifer Faber3, Theodor Rüber4, Hartmut Vatter5, Alexander Radbruch1,2, Frederic Carsten Schmeel1,2.
Abstract
Our objective was to evaluate the diagnostic performance of a convolutional neural network (CNN) trained on multiple MR imaging features of the lumbar spine, to detect a variety of different degenerative changes of the lumbar spine. One hundred and forty-six consecutive patients underwent routine clinical MRI of the lumbar spine including T2-weighted imaging and were retrospectively analyzed using a CNN for detection and labeling of vertebrae, disc segments, as well as presence of disc herniation, disc bulging, spinal canal stenosis, nerve root compression, and spondylolisthesis. The assessment of a radiologist served as the diagnostic reference standard. We assessed the CNN's diagnostic accuracy and consistency using confusion matrices and McNemar's test. In our data, 77 disc herniations (thereof 46 further classified as extrusions), 133 disc bulgings, 35 spinal canal stenoses, 59 nerve root compressions, and 20 segments with spondylolisthesis were present in a total of 888 lumbar spine segments. The CNN yielded a perfect accuracy score for intervertebral disc detection and labeling (100%), and moderate to high diagnostic accuracy for the detection of disc herniations (87%; 95% CI: 0.84, 0.89), extrusions (86%; 95% CI: 0.84, 0.89), bulgings (76%; 95% CI: 0.73, 0.78), spinal canal stenoses (98%; 95% CI: 0.97, 0.99), nerve root compressions (91%; 95% CI: 0.89, 0.92), and spondylolisthesis (87.61%; 95% CI: 85.26, 89.21), respectively. Our data suggest that automatic diagnosis of multiple different degenerative changes of the lumbar spine is feasible using a single comprehensive CNN. The CNN provides high diagnostic accuracy for intervertebral disc labeling and detection of clinically relevant degenerative changes such as spinal canal stenosis and disc extrusion of the lumbar spine.Entities:
Keywords: MRI; automated reading; deep learning; diagnostic performance; disc bulging; disc protrusion; lumbar spine; nerve root compression; spinal canal stenosis; spondylolisthesis
Year: 2021 PMID: 34069362 PMCID: PMC8158737 DOI: 10.3390/diagnostics11050902
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Figure 1U-Net-like segmentation architecture. The input image is first downscaled in four steps, then the low-resolution feature map is upscaled to the resolution of the input image. Additional feature maps from the downscaling part are incorporated at each upscaling layer.
Figure 2Measurement and classification of disc herniation, disc bulging, nerve root compression and spinal canal stenosis. T2-weighted, axial slice through the segment L5/S1 at disc level showing disc herniation, disc bulging, no nerve root compression and no spinal canal stenosis. The projected contour of the vertebral body adjacent to the disc is represented by the rounded blue line, the intervertebral disc is represented by the blue area. The red area represents herniated disc material, the distance between the red crosses is measured 6.5 mm and is therefore correctly classified as disc herniation. The blue lines and the single red line on the right side of the disc perpendicular to the projection of the contour of the vertebral body represent measurements of the disc exceeding the boundaries of the adjacent vertebral bodies, correctly reported as 4 mm bulging. The nerve roots (pink) have no contact to either the herniated or the bulging parts of the disc, therefore nerve root compression was correctly classified as absent. The light blue area represents the dural sac of 201 mm2. There was no spinal canal stenosis reported.
CNN diagnostic performance. TP: true positive; TN: true negative; FP: false positive; FN: false negative; PPV: positive predictive value; NPV: negative predictive value.
| Characteristic | Herniation | Extrusion | Stenosis | Bulging | Nerve Root Compression | Spondylolisthesis |
|---|---|---|---|---|---|---|
|
| 77 (8.67%) | 46 (5.18%) | 35 (3.94%) | 133 (14.98%) | 59 (5.70%) | 20 (2.25%) |
|
| 58 | 41 | 27 | 69 | 42 | 16 |
|
| 713 | 727 | 844 | 602 | 896 | 762 |
|
| 98 | 115 | 9 | 153 | 81 | 106 |
|
| 19 | 5 | 8 | 64 | 17 | 4 |
|
| 75.33% | 89.13% | 77.14% | 51.88% | 71.19% | 80.00% |
|
| 87.92% | 86.34% | 98.95% | 79.74% | 91.71% | 87.79% |
|
| 86.82% | 86.49% | 98.09% | 75.56% | 90.54% | 87.61% |
|
| 37.18% | 26.28% | 75.00% | 31.08% | 34.15% | 13.11% |
|
| 97.40% | 99.32% | 99.06% | 90.39% | 98.14% | 99.48% |
|
| <0.001 | <0.001 | 1 | <0.001 | <0.001 | <0.001 |
Figure 3Disc extrusion and spinal canal stenosis correctly detected by the CNN. Upper row: Sagittal and axial T2 weighted MR images of the lumbar spine showing a large disc extrusion (arrows) with severe spinal canal stenosis. Middle row: User interface of the CNN. Each segment of the lumbar spine is correctly labelled by the CNN with the segment showing the most severe pathology being highlighted in red. The vertebral bodies are highlighted in green; the lumbar discs are highlighted in blue. The transverse processes are highlighted in yellow; the laminae and the spinous processes are highlighted in purple; the flava ligaments are highlighted in brown. The dural sac is highlighted in light blue, the nerve roots are highlighted in pink. Disc bulgings and disc herniations are highlighted in red. Lower row: Excerpt of the written report automatically generated by the software.
Figure 4Small disc extrusion with nerve root compression missed by the CNN. Upper row: Sagittal and axial T2 weighted images of the lumbar spine showing a small disc extrusion at the level of L3/L4 on the right side (arrows) with compression of the nerve root L3 on the right side (arrowhead). Middle row: User interface of the CNN with correct identification of the nerve roots (pink), but without detection of the small disc herniation on the right. Lower row: Excerpt from the written report automatically generated by the software.
Figure 5Intraforaminal disc extrusion missed by the CNN. Upper row: Sagittal and axial T2 weighted images of the lumbar spine showing an intraforaminal disc extrusion at the level of L4/L5 on the right side (arrows) with compression of the nerve root L4 on the right side (arrowhead). Middle row: User interface of the CNN. The CNN misinterpreted the herniated disc material as the nerve root L4, highlighted in pink. The actual nerve root L4 is situated lateral to the herniated disc material and has not been identified by the algorithm. Lower row: Excerpt from the written report automatically generated by the software.