| Literature DB >> 34065612 |
Ye-Rin Kim1, Ki-Uk Kim2, Jung-Hee Lee3, Deok-Won Kim1, Jae-Heun Chung4, Yeong-Dae Kim5, Dong-Hoon Shin3, Min-Ki Lee2, Yong-Il Shin6, Sang-Yull Lee1.
Abstract
To identify cancer/testis (CT) antigens and immunogenic proteins, immunoscreening of testicular and small-cell lung cancer cell line NCI-H889 cDNA libraries was performed using serum obtained from a small-cell lung cancer (SCLC) patient. We obtained 113 positive cDNA clones comprised of 74 different genes, designated KP-SCLC-1 through KP-SCLC-74. Of these genes, 59 genes were found to be related to cancers by EMBASE analysis. Three of these antigens, including KP-SCLC-29 (NOL4), KP-SCLC-59 (CCDC83), and KP-SCLC-69 (KIF20B), were CT antigens. RT-PCR and western blot analysis showed that NOL4 was frequently present in small-cell lung cancer cell lines (8/9, 8/9). In addition, NOL4 mRNA was weakly, or at a low frequency, or not detected in various cancer cell lines. Our results reveal that NOL4 was expressed at protein levels in small-cell lung cancer tissues (10/10) but not detected in lung adenocarcinoma and squamous cell carcinoma by immunohistochemical analysis. Serological response to NOL4 was also evaluated by western blot assay using NOL4 recombinant protein. A humoral response against NOL4 proteins was detected in 75% (33/44) of small-cell lung cancer patients and in 65% (13/20) of healthy donors by a serological western blot assay. These data suggest that NOL4 is a specific target that may be useful for diagnosis and immunotherapy in SCLC.Entities:
Keywords: KP-SCLC-29; NOL4; SEREX; cancer/testis antigen; small-cell lung cancer
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Year: 2021 PMID: 34065612 PMCID: PMC8161805 DOI: 10.3390/curroncol28030179
Source DB: PubMed Journal: Curr Oncol ISSN: 1198-0052 Impact factor: 3.677
Antigens identified by SEREX in SCLC patient.
| KP-SCLC-Antigen a | Gene Name/REFSEQ mRNAs | Cancers-Related Published Papers b | KP-SCLC-Antigen | Gene Name/REFSEQ mRNAs | Cancers-Related Published Papers |
|---|---|---|---|---|---|
| 1 | EIF5B/NM_015904.4 | Yes | 38 | CTBP2/NM_001329.4 | Yes |
| 2 | GNB2L1/NM_006098.5 | Yes | 39 | RPL36/NM_033643.3 | Yes |
| 3 | PSMD3/NM_002809.4 | Yes | 40 | CYC1/NM_001916.5 | Yes |
| 4 | TAF-I/NM_001122821.2 | Yes | 41 | RPS27A/NM_002954.6 | Yes |
| 5 | SFRS1/NM_006924.5 | Yes | 42 | ZNF358/NM_018083.5 | No |
| 6 | FAU/NM_001997.5 | NO | 43 | UBTF/NM_014233.4 | Yes |
| 7 | SSX2IP/NM_001166417.2 | Yes | 44 | ANKRD11/NM_001256182.2 | Yes |
| 8 | PYCR1/NM_001330523.1 | Yes | 45 | ASS1/NM_000050.4 | Yes |
| 9 | HARS2/NM_012208.4 | No | 46 | TOP1MT/NM_052963.3 | Yes |
| 10 | CHD7/NM_017780.4 | Yes | 47 | DDX39B/NM_004640.7 | Yes |
| 11 | COASY/NM_025233.7 | Yes | 48 | SMARCA4/NM_001128849.3 | Yes |
| 12 | HMBS/NM_000190.4 | Yes | 49 | NREP/NM_004772.4 | Yes |
| 13 | JSRP1/NM_144616.4 | No | 50 | PTMA/NM_001099285.2 | Yes |
| 14 | RAN/NM_006325.5 | Yes | 51 | HLA-A/NM_002116.8 | Yes |
| 15 | SSSCA1/NM_006396.3 | No | 52 | CPSF3L/NM_001256456.2 | No |
| 16 | HMGB2/NM_002129.4 | Yes | 53 | CCDC124/NM_138442.4 | No |
| 17 | BRD7/NM_001173984.3 | Yes | 54 | HDLBP/NM_005336.6 | Yes |
| 18 | SUV420H2/NM_032701.4 | Yes | 55 | RPL10/NM_006013.5 | Yes |
| 19 | CDKN2A/NM_000077.5 | Yes | 56 | RPL7A/NM_000972.3 | Yes |
| 20 | RIOK1/NM_031480.3 | Yes | 57 | HNRNPA1/NM_002136.4 | Yes |
| 21 | TTC5/NM_138376.3 | Yes | 58 | GNL2/NM_013285.3 | Yes |
| 22 | GDI2/NM_001494.4 | Yes | 59 | CCDC83/NM_173556.5 | Yes |
| 23 | NAPRT1/NM_145201.6 | Yes | 60 | GPBP1L1/NM_021639.5 | No |
| 24 | MRPL12/NM_002949.4 | No | 61 | GCSH/NM_004483.5 | No |
| 25 | EIF3F/NM_003754.3 | No | 62 | CCDC158/NM_001042784.1 | No |
| 26 | MCM3/NM_002388.6 | Yes | 63 | ATP5O/NM_001697.3 | No |
| 27 | STUB1/NM_005861.4 | Yes | 64 | GDI2/NM_001494.4 | Yes |
| 28 | HSPA4/NM_002154.4 | Yes | 65 | IQSEC1/NM_001134382.3 | Yes |
| 29 | NOL4/NM_003787.5 | Yes | 66 | TUBB2/NM_001069.3 | Yes |
| 30 | PUF60/NM_078480.3 | Yes | 67 | CCDC17/NM_001114938.3 | No |
| 31 | RPL9/NM_000661.5 | Yes | 68 | ZNF532/NM_018181.6 | Yes |
| 32 | CDK11A/NM_024011.4 | Yes | 69 | KIF20B/NM_001284259.2 | Yes |
| 33 | GOSR1/NM_004871.3 | Yes | 70 | TMEM9/NM_016456.5 | Yes |
| 34 | NME1/NM_198175.1 | Yes | 71 | KIF27/NM_017576.4 | No |
| 35 | XLS/NM_001329678.2 | Yes | 72 | CLIC4/NM_013943.3 | Yes |
| 36 | HMGN3/NM_004242.4 | No | 73 | ODC1/NM_002539.3 | Yes |
| 37 | ACTG1/NM_001199954.3 | Yes | 74 | ST13/NM_003932.5 | Yes |
a KP-SCLC-1 to -58 and KP-SCLC-59 to -74 were discovered from NCI-H889 cDNA library source and from testis cDNA library source, respectively. b Analysis of EMBASE database was used to determine whether each gene has at least one published article related to cancer.
Figure 1The mRNA and protein expression of NOL4 in normal tissues and small-cell lung cancer (SCLC) cell lines. RT-PCR was performed on mRNA expression of NOL4 in normal tissues (A) and SCLC lines (B). Western blot analysis was performed to evaluate the protein expression of NOL4 in SCLC cell lines, and the intensity ratio of each band was analyzed by Image J (C). Normal tissues were indicated as follows: 1, spleen; 2, thymus; 3, prostate; 4, ovary; 5, small intestine; 6, colon; 7, leukocyte; 8, heart; 9, brain; 10, placenta; 11, lung; 12, pancreas; 13, liver; 14, skeletal muscle; 15, kidney; and 16, testis. The cDNA templates were normalized using GAPDH, as shown in the bottom panel.
Figure 2The mRNA expression of NOL4 in several cancer cell lines.
Figure 3Immunohistochemical staining of NOL4 proteins. Panels refer to representative sections showing positive staining (A) and negative staining (B). Original magnification is 100×.
Summary of anti NOL4 antibodies in sera from SCLC patients and healthy donors.
| Serum Number | Serum Source a | SeroreacTivity b | Serum Number | Serum Source | Seroreactivity |
|---|---|---|---|---|---|
| N1 | Healthy donor | N | S13 | ED-SCLC | P |
| N2 | Healthy donor | N | S14 | ED-SCLC | P |
| N3 | Healthy donor | P | S15 | ED-SCLC | P |
| N4 | Healthy donor | P | S16 | ED-SCLC | P |
| N5 | Healthy donor | P | S17 | ED-SCLC | P |
| N6 | Healthy donor | N | S18 | ED-SCLC | N |
| N7 | Healthy donor | N | S19 | ED-SCLC | P |
| N8 | Healthy donor | P | S20 | ED-SCLC | P |
| N9 | Healthy donor | P | S21 | ED-SCLC | P |
| N10 | Healthy donor | P | S22 | ED-SCLC | P |
| N11 | Healthy donor | N | S23 | ED-SCLC | P |
| N12 | Healthy donor | P | S24 | ED-SCLC | P |
| N13 | Healthy donor | N | S25 | ED-SCLC | P |
| N14 | Healthy donor | P | S26 | ED-SCLC | P |
| N15 | Healthy donor | P | S27 | ED-SCLC | P |
| N16 | Healthy donor | P | S28 | ED-SCLC | P |
| N17 | Healthy donor | N | S29 | ED-SCLC | P |
| N18 | Healthy donor | P | S30 | ED-SCLC | P |
| N19 | Healthy donor | P | S31 | ED-SCLC | P |
| N20 | Healthy donor | P | S32 | LD-SCLC | P |
| S1 | ED-SCLC | N | S33 | LD-SCLC | P |
| S2 | ED-SCLC | N | S34 | LD-SCLC | P |
| S3 | ED-SCLC | N | S35 | LD-SCLC | P |
| S4 | ED-SCLC | N | S36 | LD-SCLC | P |
| S5 | ED-SCLC | P | S37 | LD-SCLC | N |
| S6 | ED-SCLC | P | S38 | LD-SCLC | P |
| S7 | ED-SCLC | P | S39 | LD-SCLC | P |
| S8 | ED-SCLC | N | S40 | LD-SCLC | N |
| S9 | ED-SCLC | P | S41 | LD-SCLC | N |
| S10 | ED-SCLC | N | S42 | LD-SCLC | P |
| S11 | ED-SCLC | P | S43 | LD-SCLC | P |
| S12 | ED-SCLC | P | S44 | LD-SCLC | N |
a ED; extensive disease, LD; limited disease, b P; positive, N; negative.