Literature DB >> 33934723

How to publish a new fungal species, or name, version 3.0.

M Catherine Aime1, Andrew N Miller2, Takayuki Aoki3, Konstanze Bensch4, Lei Cai5, Pedro W Crous4, David L Hawksworth6,7,8, Kevin D Hyde9, Paul M Kirk10, Robert Lücking11, Tom W May12, Elaine Malosso13, Scott A Redhead14, Amy Y Rossman15, Marc Stadler16, Marco Thines17,18, Andrey M Yurkov19, Ning Zhang20, Conrad L Schoch21.   

Abstract

It is now a decade since The International Commission on the Taxonomy of Fungi (ICTF) produced an overview of requirements and best practices for describing a new fungal species. In the meantime the International Code of Nomenclature for algae, fungi, and plants (ICNafp) has changed from its former name (the International Code of Botanical Nomenclature) and introduced new formal requirements for valid publication of species scientific names, including the separation of provisions specific to Fungi and organisms treated as fungi in a new Chapter F. Equally transformative have been changes in the data collection, data dissemination, and analytical tools available to mycologists. This paper provides an updated and expanded discussion of current publication requirements along with best practices for the description of new fungal species and publication of new names and for improving accessibility of their associated metadata that have developed over the last 10 years. Additionally, we provide: (1) model papers for different fungal groups and circumstances; (2) a checklist to simplify meeting (i) the requirements of the ICNafp to ensure the effective, valid and legitimate publication of names of new taxa, and (ii) minimally accepted standards for description; and, (3) templates for preparing standardized species descriptions.

Entities:  

Keywords:  Data repositories; Dual nomenclature; FAIR principles; Legitimate publication; New combinations; Taxonomic best practices; Typification; Valid publication

Year:  2021        PMID: 33934723     DOI: 10.1186/s43008-021-00063-1

Source DB:  PubMed          Journal:  IMA Fungus        ISSN: 2210-6340            Impact factor:   3.515


  24 in total

1.  Fusarium agapanthi sp. nov., a novel bikaverin and fusarubin-producing leaf and stem spot pathogen of Agapanthus praecox (African lily) from Australia and Italy.

Authors:  Jacqueline Edwards; Desmond Auer; Sri-Kanthi de Alwis; Brett Summerell; Takayuki Aoki; Robert H Proctor; Mark Busman; Kerry O'Donnell
Journal:  Mycologia       Date:  2016-07-29       Impact factor: 2.696

2.  Fusarium torreyae sp. nov., a pathogen causing canker disease of Florida torreya (Torreya taxifolia), a critically endangered conifer restricted to northern Florida and southwestern Georgia.

Authors:  Takayuki Aoki; Jason A Smith; Lacey L Mount; David M Geiser; Kerry O'Donnell
Journal:  Mycologia       Date:  2012-10-25       Impact factor: 2.696

Review 3.  Yeast culture collections in the twenty-first century: new opportunities and challenges.

Authors:  Kyria L Boundy-Mills; Ewald Glantschnig; Ian N Roberts; Andrey Yurkov; Serge Casaregola; Heide-Marie Daniel; Marizeth Groenewald; Benedetta Turchetti
Journal:  Yeast       Date:  2016-06-17       Impact factor: 3.239

4.  Two new endophytic Atractiellomycetes, Atractidochium hillariae and Proceropycnis hameedii.

Authors:  M Catherine Aime; Hector Urbina; Julian A Liber; Gregory Bonito; Ryoko Oono
Journal:  Mycologia       Date:  2018 Jan-Feb       Impact factor: 2.696

5.  The international nucleotide sequence database collaboration.

Authors:  Ilene Karsch-Mizrachi; Toshihisa Takagi; Guy Cochrane
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

6.  Dark septate endophytic pleosporalean genera from semiarid areas.

Authors:  D G Knapp; G M Kovács; E Zajta; J Z Groenewald; P W Crous
Journal:  Persoonia       Date:  2015-02-24       Impact factor: 11.051

7.  Ustilago species causing leaf-stripe smut revisited.

Authors:  Julia Kruse; Wolfgang Dietrich; Horst Zimmermann; Friedemann Klenke; Udo Richter; Heidrun Richter; Marco Thines
Journal:  IMA Fungus       Date:  2018-03-20       Impact factor: 3.515

8.  Red yeasts from leaf surfaces and other habitats: three new species and a new combination of Symmetrospora (Pucciniomycotina, Cystobasidiomycetes).

Authors:  D Haelewaters; M Toome-Heller; S Albu; M C Aime
Journal:  Fungal Syst Evol       Date:  2019-12-20
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  13 in total

1.  Publicly Available and Validated DNA Reference Sequences Are Critical to Fungal Identification and Global Plant Protection Efforts: A Use-Case in Colletotrichum.

Authors:  Aaron H Kennedy; Conrad L Schoch; Glorimar Marrero; Vyacheslav Brover; Barbara Robbertse
Journal:  Plant Dis       Date:  2022-05-10       Impact factor: 4.614

Review 2.  Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes.

Authors:  Lotus A Lofgren; Jason E Stajich
Journal:  Curr Biol       Date:  2021-10-11       Impact factor: 10.900

3.  Fine Identification and Classification of a Novel Beneficial Talaromyces Fungal Species from Masson Pine Rhizosphere Soil.

Authors:  Xiao-Rui Sun; Ming-Ye Xu; Wei-Liang Kong; Fei Wu; Yu Zhang; Xing-Li Xie; De-Wei Li; Xiao-Qin Wu
Journal:  J Fungi (Basel)       Date:  2022-02-03

4.  New and interesting species of Penicillium (Eurotiomycetes, Aspergillaceae) in freshwater sediments from Spain.

Authors:  Daniel Torres-Garcia; Josepa Gené; Dania García
Journal:  MycoKeys       Date:  2022-02-01       Impact factor: 2.984

5.  Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes.

Authors:  Andrey Yurkov; Artur Alves; Feng-Yan Bai; Kyria Boundy-Mills; Pietro Buzzini; Neža Čadež; Gianluigi Cardinali; Serge Casaregola; Vishnu Chaturvedi; Valérie Collin; Jack W Fell; Victoria Girard; Marizeth Groenewald; Ferry Hagen; Chris Todd Hittinger; Aleksey V Kachalkin; Markus Kostrzewa; Vassili Kouvelis; Diego Libkind; Xinzhan Liu; Thomas Maier; Wieland Meyer; Gábor Péter; Marcin Piątek; Vincent Robert; Carlos A Rosa; Jose Paulo Sampaio; Matthias Sipiczki; Marc Stadler; Takashi Sugita; Junta Sugiyama; Hiroshi Takagi; Masako Takashima; Benedetta Turchetti; Qi-Ming Wang; Teun Boekhout
Journal:  IMA Fungus       Date:  2021-07-13       Impact factor: 3.515

6.  Infraspecific variation of some brown Parmeliae (in Poland) - a comparison of ITS rDNA and non-molecular characters.

Authors:  Katarzyna Szczepańska; Beata Guzow-Krzemińska; Jacek Urbaniak
Journal:  MycoKeys       Date:  2021-12-22       Impact factor: 2.984

Review 7.  The evolving species concepts used for yeasts: from phenotypes and genomes to speciation networks.

Authors:  Teun Boekhout; M Catherine Aime; Dominik Begerow; Toni Gabaldón; Joseph Heitman; Martin Kemler; Kantarawee Khayhan; Marc-André Lachance; Edward J Louis; Sheng Sun; Duong Vu; Andrey Yurkov
Journal:  Fungal Divers       Date:  2021-06-26       Impact factor: 20.372

8.  The haustorium as a driving force for speciation in thallus-forming Laboulbeniomycetes.

Authors:  Danny Haelewaters; Maarten Lubbers; André De Kesel
Journal:  IMA Fungus       Date:  2022-01-31       Impact factor: 3.515

Review 9.  Current Insight into Traditional and Modern Methods in Fungal Diversity Estimates.

Authors:  Ajay Kumar Gautam; Rajnish Kumar Verma; Shubhi Avasthi; Yogita Bohra; Bandarupalli Devadatha; Mekala Niranjan; Nakarin Suwannarach
Journal:  J Fungi (Basel)       Date:  2022-02-24

Review 10.  Strategies to combat the problem of yam anthracnose disease: Status and prospects.

Authors:  Valentine Otang Ntui; Edak Aniedi Uyoh; Effiom Eyo Ita; Aniedi-Abasi Akpan Markson; Jaindra Nath Tripathi; Nkese Ime Okon; Mfon Okon Akpan; Julius Oyohosuho Phillip; Ebiamadon Andi Brisibe; Ene-Obong Effiom Ene-Obong; Leena Tripathi
Journal:  Mol Plant Pathol       Date:  2021-07-17       Impact factor: 5.663

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