Literature DB >> 27144478

Yeast culture collections in the twenty-first century: new opportunities and challenges.

Kyria L Boundy-Mills1, Ewald Glantschnig2, Ian N Roberts3, Andrey Yurkov4, Serge Casaregola5, Heide-Marie Daniel6, Marizeth Groenewald7, Benedetta Turchetti8.   

Abstract

The twenty-first century has brought new opportunities and challenges to yeast culture collections, whether they are long-standing or recently established. Basic functions such as archiving, characterizing and distributing yeasts continue, but with expanded responsibilities and emerging opportunities. In addition to a number of well-known, large public repositories, there are dozens of smaller public collections that differ in the range of species and strains preserved, field of emphasis and services offered. Several collections have converted their catalogues to comprehensive databases and synchronize them continuously through public services, making it easier for users worldwide to locate a suitable source for specific yeast strains and the data associated with these yeasts. In-house research such as yeast taxonomy continues to be important at culture collections. Because yeast culture collections preserve a broad diversity of species and strains within a species, they are able to make discoveries in many other areas as well, such as biotechnology, functional, comparative and evolution genomics, bioprocesses and novel products. Due to the implementation of the Convention of Biological Diversity (CBD) and the Nagoya Protocol (NP), there are new requirements for both depositors and users to ensure that yeasts were collected following proper procedures and to guarantee that the country of origin will be considered if benefits arise from a yeast's utilization. Intellectual property rights (IPRs) are extremely relevant to the current access and benefit-sharing (ABS) mechanisms; most research and development involving genetic resources and associated traditional knowledge will be subject to this topic.
Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Entities:  

Keywords:  Convention of Biological Diversity; Nagoya Protocol; culture collection; yeast biotechnology; yeasts

Mesh:

Year:  2016        PMID: 27144478     DOI: 10.1002/yea.3171

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  17 in total

Review 1.  Stress-tolerant non-conventional microbes enable next-generation chemical biosynthesis.

Authors:  Sarah Thorwall; Cory Schwartz; Justin W Chartron; Ian Wheeldon
Journal:  Nat Chem Biol       Date:  2020-01-23       Impact factor: 15.040

Review 2.  Public Microbial Resource Centers: Key Hubs for Findable, Accessible, Interoperable, and Reusable (FAIR) Microorganisms and Genetic Materials.

Authors:  P Becker; M Bosschaerts; P Chaerle; H-M Daniel; A Hellemans; A Olbrechts; L Rigouts; A Wilmotte; M Hendrickx
Journal:  Appl Environ Microbiol       Date:  2019-10-16       Impact factor: 4.792

3.  Simultaneous production of intracellular triacylglycerols and extracellular polyol esters of fatty acids by Rhodotorula babjevae and Rhodotorula aff. paludigena.

Authors:  Luis A Garay; Irnayuli R Sitepu; Tomas Cajka; Erin Cathcart; Oliver Fiehn; J Bruce German; David E Block; Kyria L Boundy-Mills
Journal:  J Ind Microbiol Biotechnol       Date:  2017-07-05       Impact factor: 3.346

4.  It is time for a new type of type to facilitate naming the microbial world.

Authors:  M Palmer; I Sutcliffe; S N Venter; B P Hedlund
Journal:  New Microbes New Infect       Date:  2022-06-01

Review 5.  Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes.

Authors:  Lotus A Lofgren; Jason E Stajich
Journal:  Curr Biol       Date:  2021-10-11       Impact factor: 10.900

6.  Discovery of synthesis and secretion of polyol esters of fatty acids by four basidiomycetous yeast species in the order Sporidiobolales.

Authors:  Luis A Garay; Irnayuli R Sitepu; Tomas Cajka; Oliver Fiehn; Erin Cathcart; Russell W Fry; Atit Kanti; Agustinus Joko Nugroho; Sarah Asih Faulina; Sira Stephanandra; J Bruce German; Kyria L Boundy-Mills
Journal:  J Ind Microbiol Biotechnol       Date:  2017-03-13       Impact factor: 3.346

7.  A novel Arabidopsis phyllosphere resident Protomyces species and a re-examination of genus Protomyces based on genome sequence data.

Authors:  Kai Wang; Timo Sipilä; Kirk Overmyer
Journal:  IMA Fungus       Date:  2021-03-19       Impact factor: 3.515

8.  Study of Holtermanniella wattica, Leucosporidium creatinivorum, Naganishia adeliensis, Solicoccozyma aeria, and Solicoccozyma terricola for their lipogenic aptitude from different carbon sources.

Authors:  Sara Filippucci; Giorgia Tasselli; Alessandro Scardua; Simone Di Mauro; Maria Rita Cramarossa; Davide Perini; Benedetta Turchetti; Andrea Onofri; Luca Forti; Pietro Buzzini
Journal:  Biotechnol Biofuels       Date:  2016-11-28       Impact factor: 6.040

Review 9.  The U.S. Culture Collection Network Responding to the Requirements of the Nagoya Protocol on Access and Benefit Sharing.

Authors:  Kevin McCluskey; Katharine B Barker; Hazel A Barton; Kyria Boundy-Mills; Daniel R Brown; Jonathan A Coddington; Kevin Cook; Philippe Desmeth; David Geiser; Jessie A Glaeser; Stephanie Greene; Seogchan Kang; Michael W Lomas; Ulrich Melcher; Scott E Miller; David R Nobles; Kristina J Owens; Jerome H Reichman; Manuela da Silva; John Wertz; Cale Whitworth; David Smith
Journal:  mBio       Date:  2017-08-15       Impact factor: 7.867

10.  The challenges faced by living stock collections in the USA.

Authors:  Kevin McCluskey; Kyria Boundy-Mills; Greg Dye; Erin Ehmke; Gregg F Gunnell; Hippokratis Kiaris; Maxi Polihronakis Richmond; Anne D Yoder; Daniel R Zeigler; Sarah Zehr; Erich Grotewold
Journal:  Elife       Date:  2017-03-13       Impact factor: 8.140

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