| Literature DB >> 33921145 |
Averyan V Pushkarev1,2, Alexey V Orlov1, Sergey L Znoyko1, Vera A Bragina1, Petr I Nikitin1.
Abstract
The ever-increasing use of magnetic particle bioconjugates (MPB) in biosensors calls for methods of comprehensive characterization of their interaction with targets. Label-free optical sensors commonly used for studying inter-molecular interactions have limited potential for MPB because of their large size and multi-component non-transparent structure. We present an easy-to-use method that requires only three 20-min express measurements to determine the key parameters for selection of optimal MPB for a biosensor: kinetic and equilibrium characteristics, and a fraction of biomolecules on the MPB surface that are capable of active targeting. The method also provides a prognostic dependence of MPB targeting efficiency upon interaction duration and sample volume. These features are possible due to joining a magnetic lateral flow assay, a highly sensitive sensor for MPB detection by the magnetic particle quantification technique, and a novel mathematical model that explicitly describes the MPB-target interactions and does not comprise parameters to be fitted additionally. The method was demonstrated by experiments on MPB targeting of cardiac troponin I and staphylococcal enterotoxin B. The validation by an independent label-free technique of spectral-correlation interferometry showed good correlation between the results obtained by both methods. The presented method can be applied to other targets for faster development and selection of MPB for affinity sensors, analytical technologies, and realization of novel concepts of MPB-based biosensing in vivo.Entities:
Keywords: biosensors for staphylococcal enterotoxins detection; immunosensing of cardiac markers; lateral flow sensors; magnetic sensors; particle targeting
Mesh:
Year: 2021 PMID: 33921145 PMCID: PMC8071512 DOI: 10.3390/s21082802
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Experimental setup for rapid determining the target-binding characteristics of magnetic particle bioconjugates using the developed mathematical model.
Figure 2Kinetic constants kon (on the left) and koff (on the right) determined for staphylococcal enterotoxin B (SEB) as a model target using the proposed method at various values of sample volume and interaction duration.
Values of sorption characteristics of magnetic particle bioconjugates (MPBs) obtained with the proposed method.
| MPB Target | MPB Diameter, nm | Total TBB | Active TBB | Total TBB | Active TBB | Total TBB | Active TBB |
|---|---|---|---|---|---|---|---|
| cTnI | 196 | 1.037 | 0.217 | 3.27 × 104 | 6.84 × 103 | 2.71 × 1017 | 5.67 × 1016 |
| SEB | 213 | 0.781 | 0.121 | 2.61 × 104 | 4.06 × 103 | 2.08 × 1017 | 3.23 × 1016 |
1 pcs—pieces of target-binding biomolecules per one MPB; TBB—target-binding biomolecules; cTnI—cardiac troponin I.
Figure 3Schematic of the Spectral Correlation Interferometry (SCI)-based experiments for independent determination of kinetic and equilibrium constants of MPB-target interactions, and the related experimental sensograms recorded in real time for SEB target (on the left) and cTnI target (on the right).
Side-by-side comparison of values for constants obtained with the presented method and an independent optical label-free technique of spectral-correlation interferometry
| Method | Target | Interaction | kon, M−1s−1 | koff, s−1 | KA, M−1 | KD, M |
|---|---|---|---|---|---|---|
| Label-free SCI | cTnI | TBB–target | (7.9 ± 0.8) × 104 | (2.5 ± 0.4) × 10−4 | (3.1 ± 0.6) × 108 | (3.2 ± 0.6) × 10−9 |
| Proposed here | cTnI | TBB–target | (7.3 ± 1.0) × 104 | (2.9 ± 0.2) × 10−4 | (2.5 ± 0.4) × 108 | (4.0 ± 0.6) × 10−9 |
| Proposed here | cTnI | MPB–target | (6.8 ± 1.4) × 107 | (2.8 ± 1.2) × 10−7 | (2.4 ± 1.2) × 1014 | (4.1 ± 2.0) × 10−15 |
| Label-free SCI | SEB | TBB–target | (1.5 ± 0.3) × 104 | (3.3 ± 1.0) × 10−4 | (4.6 ± 1.7) × 107 | (2.2 ± 0.8) × 10−8 |
| Proposed here | SEB | TBB–target | (8.4 ± 0.9) × 103 | (2.4 ± 0.3) × 10−4 | (3.4 ± 0.6) × 107 | (2.9 ± 0.5) × 10−8 |
| Proposed here | SEB | MPB–target | (1.1 ± 0.3) × 107 | (3.0 ± 1.7) × 10−7 | (3.5 ± 2.2) × 1013 | (2.8 ± 1.7) × 10−14 |
Figure 4Comparison of MPB signals predicted theoretically (orange color) with the experimentally measured by the magnetic particle quantification technique quantity of MPB (blue color) trapped at the test line after interaction with target under various interaction times and target-sample volumes.
Comparison of current methods for characterization of target binding and kinetics of bioconjugates
| Method | Time | Instrument | Easy-To-Use | Amount of Total Ab | Amount of Active Ab | Kinetics of TBB | Kinetics of MPB | Equilibrium Constants | Prognostic Ability | Ref. |
|---|---|---|---|---|---|---|---|---|---|---|
| Proposed method | 20 min | Magnetic detector | YES | YES | YES | YES | YES | YES | YES | Present work |
| Lateral flow | 5–30 min | Magnetic or optical detector | YES | NO | NO | NO | YES | NO | NO | [ |
| Label-free techniques | 30 min—4 h | Label-free detector | NO | NO | YES | NO | YES | YES | NO | [ |
| Radioactive labels-based methods | Up to 12 h | Detector of radiolabels | NO | YES | YES | NO | YES | YES | NO | [ |
| Optomagnetic combined with supernatant assay | Up to 6 h | Optomagnetic biosensor platform | NO | YES | YES | YES | YES | YES | NO | [ |
| Mathematical model-based methods | Depends on experiments required | Depends on experiments required | NO | NO | YES | YES | YES | YES | YES | [ |
| ELISA-based methods | 2–16 h | Microplate and plate reader | NO | YES | YES | NO | NO | YES | NO | [ |
| SDS-PAGE analysis | 2 h | Phast system apparatus | NO | YES | NO | NO | NO | NO | NO | [ |
| Fluorescence-based assays | 1–2 h | Spectrofluorimeter | NO | YES | NO | NO | NO | NO | NO | [ |
| BCA/Bradford/ Lowry assays | 30–60 min | Microplate and plate reader | YES | YES | NO | NO | NO | NO | NO | [ |