Literature DB >> 18523019

Label-free and dynamic detection of biomolecular interactions for high-throughput microarray applications.

Emre Ozkumur1, James W Needham, David A Bergstein, Rodrigo Gonzalez, Mario Cabodi, Jonathan M Gershoni, Bennett B Goldberg, M Selim Unlü.   

Abstract

Direct monitoring of primary molecular-binding interactions without the need for secondary reactants would markedly simplify and expand applications of high-throughput label-free detection methods. A simple interferometric technique is presented that monitors the optical phase difference resulting from accumulated biomolecular mass. As an example, 50 spots for each of four proteins consisting of BSA, human serum albumin, rabbit IgG, and protein G were dynamically monitored as they captured corresponding antibodies. Dynamic measurements were made at 26 pg/mm(2) SD per spot and with a detectable concentration of 19 ng/ml. The presented method is particularly relevant for protein microarray analysis because it is label-free, simple, sensitive, and easily scales to high-throughput.

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Year:  2008        PMID: 18523019      PMCID: PMC2430348          DOI: 10.1073/pnas.0711421105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Interference-based detection of nucleic acid targets on optically coated silicon.

Authors:  R Jenison; S Yang; A Haeberli; B Polisky
Journal:  Nat Biotechnol       Date:  2001-01       Impact factor: 54.908

2.  A perspective on protein microarrays.

Authors:  Peter Mitchell
Journal:  Nat Biotechnol       Date:  2002-03       Impact factor: 54.908

3.  Quantitative methods for spatially resolved adsorption/desorption measurements in real time by surface plasmon resonance microscopy.

Authors:  Jennifer S Shumaker-Parry; Charles T Campbell
Journal:  Anal Chem       Date:  2004-02-15       Impact factor: 6.986

4.  Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays.

Authors:  Sonali Mukherjee; Michael F Berger; Ghil Jona; Xun S Wang; Dale Muzzey; Michael Snyder; Richard A Young; Martha L Bulyk
Journal:  Nat Genet       Date:  2004-11-14       Impact factor: 38.330

5.  Self-assembled organic monolayers: model systems for studying adsorption of proteins at surfaces.

Authors:  K L Prime; G M Whitesides
Journal:  Science       Date:  1991-05-24       Impact factor: 47.728

6.  Oblique-incidence reflectivity difference microscope for label-free high-throughput detection of biochemical reactions in a microarray format.

Authors:  Xiangdong Zhu; James P Landry; Yung-Shin Sun; Jeff P Gregg; Kit S Lam; Xiaowen Guo
Journal:  Appl Opt       Date:  2007-04-01       Impact factor: 1.980

7.  Antigen microarrays for serodiagnosis of infectious diseases.

Authors:  Letizia Mezzasoma; Tito Bacarese-Hamilton; Manlio Di Cristina; Ruggero Rossi; Francesco Bistoni; Andrea Crisanti
Journal:  Clin Chem       Date:  2002-01       Impact factor: 8.327

Review 8.  Proteomic applications for the early detection of cancer.

Authors:  Julia D Wulfkuhle; Lance A Liotta; Emanuel F Petricoin
Journal:  Nat Rev Cancer       Date:  2003-04       Impact factor: 60.716

9.  Global analysis of protein activities using proteome chips.

Authors:  H Zhu; M Bilgin; R Bangham; D Hall; A Casamayor; P Bertone; N Lan; R Jansen; S Bidlingmaier; T Houfek; T Mitchell; P Miller; R A Dean; M Gerstein; M Snyder
Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

10.  Quantitative monitoring of gene expression patterns with a complementary DNA microarray.

Authors:  M Schena; D Shalon; R W Davis; P O Brown
Journal:  Science       Date:  1995-10-20       Impact factor: 47.728

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  46 in total

1.  Validation of arrayed imaging reflectometry biosensor response for protein-antibody interactions: cross-correlation of theory, experiment, and complementary techniques.

Authors:  Rashmi Sriram; Amrita R Yadav; Charles R Mace; Benjamin L Miller
Journal:  Anal Chem       Date:  2011-04-25       Impact factor: 6.986

2.  Simultaneous measurement of 10,000 protein-ligand affinity constants using microarray-based kinetic constant assays.

Authors:  James P Landry; Yiyan Fei; Xiangdong Zhu
Journal:  Assay Drug Dev Technol       Date:  2011-12-22       Impact factor: 1.738

Review 3.  Interferometric methods for label-free molecular interaction studies.

Authors:  Amanda Kussrow; Carolyn S Enders; Darryl J Bornhop
Journal:  Anal Chem       Date:  2011-11-07       Impact factor: 6.986

4.  Multispot, label-free biodetection at a phantom plastic-water interface.

Authors:  Fabio Giavazzi; Matteo Salina; Roberto Cerbino; Mattia Bassi; Davide Prosperi; Erica Ceccarello; Francesco Damin; Laura Sola; Marco Rusnati; Marcella Chiari; Bice Chini; Tommaso Bellini; Marco Buscaglia
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-21       Impact factor: 11.205

5.  Integrated imaging instrument for self-calibrated fluorescence protein microarrays.

Authors:  A P Reddington; M R Monroe; M S Ünlü
Journal:  Rev Sci Instrum       Date:  2013-10       Impact factor: 1.523

Review 6.  Dissecting protein function and signaling using protein microarrays.

Authors:  Alejandro Wolf-Yadlin; Mark Sevecka; Gavin MacBeath
Journal:  Curr Opin Chem Biol       Date:  2009-08-05       Impact factor: 8.822

Review 7.  Invited Review Article: Review of centrifugal microfluidic and bio-optical disks.

Authors:  David D Nolte
Journal:  Rev Sci Instrum       Date:  2009-10       Impact factor: 1.523

8.  External cavity laser biosensor.

Authors:  Chun Ge; Meng Lu; Sherine George; Timothy A Flood; Clark Wagner; Jie Zheng; Anusha Pokhriyal; J Gary Eden; Paul J Hergenrother; Brian T Cunningham
Journal:  Lab Chip       Date:  2013-04-07       Impact factor: 6.799

9.  Lensless imaging for point-of-care testing.

Authors:  SangJun Moon; Hasan Onur Keles; Yun-Gon Kim; Daniel Kuritzkes; Utkan Demirci
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009

10.  TATA binding proteins can recognize nontraditional DNA sequences.

Authors:  Sunmin Ahn; Chia-Ling Huang; Emre Ozkumur; Xirui Zhang; Jyothsna Chinnala; Ayca Yalcin; Sabita Bandyopadhyay; Shelly Russek; M Selim Unlü; Charles DeLisi; Rostem J Irani
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

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