| Literature DB >> 33917030 |
Anna Grabarz1, Mariusz Michalczyk1, Wiktor Zierkiewicz1, Steve Scheiner2.
Abstract
Ab initio calculations are applied to the question as to whether a AeX5- anion (Ae = Kr, Xe) can engage in a stable complex with another anion: F-, Cl-, or CN-. The latter approaches the central Ae atom from above the molecular plane, along its C5 axis. While the electrostatic repulsion between the two anions prevents their association in the gas phase, immersion of the system in a polar medium allows dimerization to proceed. The aerogen bond is a weak one, with binding energies less than 2 kcal/mol, even in highly polar aqueous solvent. The complexes are metastable in the less polar solvents THF and DMF, with dissociation opposed by a small energy barrier.Entities:
Keywords: AIM; energy decomposition; molecular electrostatic potential; π-hole
Year: 2021 PMID: 33917030 PMCID: PMC8067769 DOI: 10.3390/molecules26082116
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1MEP of XeF5− on its 0.001 au isodensity surface at the MP2/aug-cc-pVDZ level. Color scale ranges from −0.13 (blue) to −0.11 (red) au.
Ae-X bond lengths in AeX5− monomers and maximum on the ρ = 0.001 au isodensity surface calculated at the MP2/aug-cc-pVDZ level of theory in different solvents.
| r(Ae-X) a, Å | VS,max, kcal/mol | |
|---|---|---|
| Water (ε = 78.4) | ||
| KrF5− | 2.034 | −67.1 |
| XeF5− | 2.066 | −61.3 |
| XeCl5− | 2.728 | −51.7 |
| DMF (ε = 37.2) | ||
| KrF5− | 2.034 | −67.2 |
| XeF5− | 2.066 | −61.4 |
| XeCl5− | 2.729 | −51.8 |
| THF (ε = 7.4) | ||
| KrF5− | 2.036 | −67.5 |
| XeF5− | 2.066 | −62.0 |
| XeCl5− | 2.730 | −52.4 |
a mean values.
Figure 2Optimized geometries of sample anion-anion complexes (a) KrF5−···NC−, (b) XeCl5−···Cl−, and (c) XeF5−···F−.
Intermolecular distances and change in internal bond lengths (Å) upon complex formation.
| An=F− | An=Cl− | An=CN− | ||||
|---|---|---|---|---|---|---|
| R(Ae···An) | Δr(Ae-X) | R(Ae···An) | Δr(Ae-X) | R(Ae···An) | Δr(Ae-X) | |
| Water (ε = 78.4) | ||||||
| KrF5− | 2.848 | −0.001 | 3.406 | 0.000 | 3.083 | −0.001 |
| XeF5− | 2.981 | 0.006 | 3.564 | 0.003 | 3.296 | 0.003 |
| XeCl5− | 2.894 | −0.008 | 3.458 | −0.006 | 3.165 | −0.008 |
| DMF (ε = 37.2) | ||||||
| KrF5− | 2.839 | −0.001 | 3.409 | 0.000 | 3.086 | −0.001 |
| XeF5− | 2.979 | 0.006 | 3.563 | 0.003 | 3.296 | 0.003 |
| XeCl5− | 2.888 | −0.007 | 3.461 | −0.007 | 3.169 | −0.008 |
| THF (ε = 7.4) | ||||||
| KrF5− | 2.860 | −0.001 | a | a | 3.104 | −0.001 |
| XeF5− | 2.939 | 0.008 | 3.658 | 0.004 | 3.304 | 0.004 |
| XeCl5− | 2.837 | −0.008 | 3.438 | 0.003 | 3.170 | −0.007 |
a complex not formed.
Interaction energy Eint and binding energy Eb of AeX5−∙∙∙An− complexes calculated in different solvents at the MP2/aug-cc-pVDZ level of theory. All values in kcal/mol, corrected for BSSE.
| Eint | Eb | |||||
|---|---|---|---|---|---|---|
| F− | Cl− | NC− | F− | Cl− | NC− | |
| Water (ε = 78.4) | ||||||
| KrF5− | −0.56 | −0.62 | −0.96 | −0.50 | −0.63 | −0.98 |
| XeF5− | −0.74 | −0.43 | −0.69 | −0.64 | −0.41 | −0.68 |
| XeCl5− | −1.51 | −1.81 | −2.05 | −1.49 | −1.81 | −2.04 |
| DMF (ε = 37.2) | ||||||
| KrF5− | 0.50 | 0.33 | −0.09 | 0.58 | 0.33 | −0.09 |
| XeF5− | 0.22 | 0.52 | 0.20 | 0.35 | 0.56 | 0.24 |
| XeCl5− | −0.57 | −0.85 | −1.14 | −0.52 | −0.84 | −1.13 |
| THF (ε = 7.4) | ||||||
| KrF5− | 8.36 | a | 7.04 | 8.63 | a | 7.12 |
| XeF5− | 7.30 | 7.32 | 6.69 | 7.71 | 7.45 | 6.85 |
| XeCl5− | 6.02 | 5.80 | 5.19 | 6.15 | 5.87 | 5.26 |
a: complex not formed.
Decomposition of interaction energy (kcal/mol) by LMOEDA scheme calculated at M06-2X/aug-cc-pVDZ level. Dissection terms are as follows: exchange (Eex), electrostatic (Eelec), repulsion (Erep), polarization (Epol) and dispersion (Edisp) a.
| AeX5− | R | Eint | Eex | % | Eelec | Erep | Epol | % | Edisp | % |
|---|---|---|---|---|---|---|---|---|---|---|
| Water (ε = 78.4) | ||||||||||
| KrF5− | F− | −6.17 | −5.41 | 2.4 | 202.99 | 16.96 | −215.18 | 95.2 | −5.53 | 2.4 |
| Cl− | −3.05 | −3.89 | 1.9 | 189.54 | 12.44 | −195.79 | 95.5 | −5.35 | 2.6 | |
| NC− | −3.30 | −3.87 | 2.0 | 182.56 | 12.40 | −189.76 | 95.7 | −4.63 | 2.3 | |
| XeF5− | F− | −5.84 | −6.71 | 3.0 | 198.54 | 19.20 | −211.35 | 94.5 | −5.52 | 2.5 |
| Cl− | −2.61 | −4.41 | 2.2 | 186.30 | 12.87 | −192.43 | 95.4 | −4.94 | 2.4 | |
| NC− | −2.23 | −7.32 | 3.7 | 177.30 | 20.20 | −186.96 | 93.6 | −5.45 | 2.7 | |
| XeCl5− | F− | −8.26 | −8.51 | 4.0 | 180.92 | 24.98 | −197.67 | 92.3 | −7.98 | 3.7 |
| Cl− | −4.64 | −6.03 | 3.1 | 171.40 | 18.29 | −180.01 | 92.6 | −8.29 | 4.3 | |
| NC− | −4.43 | −5.67 | 3.0 | 165.20 | 17.24 | −174.31 | 93.3 | −6.89 | 3.7 | |
| DMF (ε = 37.2) | ||||||||||
| KrF5− | F− | −5.20 | −5.59 | 2.5 | 200.76 | 17.48 | −212.25 | 95.0 | −5.60 | 2.5 |
| Cl− | −2.05 | −3.88 | 1.9 | 187.67 | 12.38 | −192.92 | 95.5 | −5.30 | 2.6 | |
| NC− | −2.33 | −3.85 | 2.0 | 180.76 | 12.34 | −186.99 | 95.7 | −4.59 | 2.3 | |
| XeF5− | F− | −4.92 | −6.78 | 3.1 | 196.39 | 19.38 | −208.38 | 94.4 | −5.53 | 2.5 |
| Cl− | −1.68 | −4.44 | 2.2 | 184.37 | 12.94 | −189.62 | 95.3 | −4.93 | 2.5 | |
| NC− | −1.33 | −7.34 | 3.7 | 175.49 | 20.24 | −184.29 | 93.5 | −5.44 | 2.8 | |
| XeCl5− | F− | −7.45 | −8.71 | 4.1 | 178.74 | 25.49 | −194.98 | 92.1 | −7.99 | 3.8 |
| Cl− | −3.75 | −6.00 | 3.1 | 169.61 | 18.18 | −177.34 | 92.6 | −8.20 | 4.3 | |
| NC− | −3.58 | −5.63 | 3.1 | 163.54 | 17.11 | −171.78 | 93.2 | −6.82 | 3.7 | |
| THF (ε = 7.4) | ||||||||||
| KrF5− | F− | 2.51 | −5.38 | 2.7 | 185.63 | 16.71 | −189.21 | 94.7 | −5.24 | 2.6 |
| Cl− | not stable | |||||||||
| NC− | 4.73 | −3.74 | 2.1 | 167.44 | 11.92 | −166.57 | 95.4 | −4.32 | 2.5 | |
| XeF5− | F− | 1.75 | −7.86 | 3.9 | 180.17 | 22.30 | −186.94 | 93.1 | −5.93 | 3.0 |
| Cl− | 5.35 | −3.52 | 2.0 | 170.97 | 10.40 | −168.30 | 95.6 | −4.20 | 2.4 | |
| NC− | 5.26 | −7.37 | 4.2 | 162.15 | 20.21 | −164.45 | 92.9 | −5.28 | 3.0 | |
| XeCl5− | F− | −1.57 | −10.50 | 5.4 | 162.70 | 30.18 | −175.65 | 90.3 | −8.30 | 4.3 |
| Cl− | 2.65 | −6.19 | 3.6 | 156.42 | 18.47 | −158.19 | 91.8 | −7.86 | 4.6 | |
| NC− | 2.55 | −5.87 | 3.5 | 151.02 | 17.65 | −153.58 | 92.5 | −6.67 | 4.0 | |
a also listed as % is the percentage contribution of each component to the total of all attractive terms.
Estimated barrier to dissociation (kcal/mol) and the intermolecular distance at which it occurs (Å) calculated at MP2/aug-cc-pVDZ level.
| Ediss | Rdiss | Ediss | Rdiss | Ediss | Rdiss | |
|---|---|---|---|---|---|---|
| R=F− | R=Cl− | R=NC− | ||||
| DMF (ε = 37.2) | ||||||
| KrF5− | 1.89 | 5.24 | 1.75 | 6.01 | negative Eint | |
| XeF5− | 2.00 | 4.38 | 1.47 | 6.16 | 2.17 | 6.50 |
| THF (ε = 7.4) | ||||||
| KrF5− | 0.97 | 3.66 | a | 1.25 | 4.30 | |
| XeF5− | 1.43 | 3.94 | 0.30 | 4.66 | 1.01 | 4.50 |
| XeCl5− | 2.50 | 4.04 | 2.09 | 4.97 | 2.73 | 4.57 |
a: complex not formed.
QTAIM descriptors of the AeX5−∙∙∙R− complexes. Bond critical point (BCP) properties: electron density ρ, Laplacian of electron density ∇2ρ and total electron energy H, were obtained at the MP2/aug-cc-pVDZ level. Data in atomic units.
| Ta |
|
∇
2
| H |
|
∇2 | H |
|
∇
2
| H |
|---|---|---|---|---|---|---|---|---|---|
| Water (ε = 78.4) | |||||||||
| An=F− | An=Cl− | An=NC− | |||||||
| KrF5− | 0.017 | 0.074 | 0.002 | 0.010 | 0.034 | 0.002 | 0.012 | 0.047 | 0.002 |
| XeF5− | 0.018 | 0.070 | 0.001 | 0.010 | 0.033 | 0.001 | 0.011 | 0.039 | 0.002 |
| XeCl5− | 0.020 | 0.080 | 0.001 | 0.012 | 0.040 | 0.001 | 0.014 | 0.050 | 0.002 |
| DMF (ε = 37.2) | |||||||||
| An=F− | An=Cl− | An=NC− | |||||||
| KrF5− | 0.017 | 0.075 | 0.002 | 0.010 | 0.034 | 0.002 | 0.012 | 0.047 | 0.002 |
| XeF5− | 0.018 | 0.070 | 0.001 | 0.010 | 0.033 | 0.001 | 0.011 | 0.039 | 0.002 |
| XeCl5− | 0.020 | 0.081 | 0.001 | 0.012 | 0.039 | 0.002 | 0.014 | 0.049 | 0.002 |
| THF (ε = 7.4) | |||||||||
| An=F− | An=Cl− | An=NC− | |||||||
| KrF5− | 0.016 | 0.071 | 0.002 | a | 0.012 | 0.045 | 0.002 | ||
| XeF5− | 0.019 | 0.075 | 0.001 | 0.009 | 0.025 | 0.001 | 0.011 | 0.038 | 0.001 |
| XeCl5− | 0.023 | 0.090 | 0.001 | 0.013 | 0.037 | 0.001 | 0.014 | 0.049 | 0.002 |
a: complex not formed.
Figure 3Doubly occupied NBO (a) p and (b) s-orbitals of KrF5− monomer, and (c) ELF diagram.