Evangelos Bakalis1, Lucas R Parent2, Maria Vratsanos3, Chiwoo Park4, Nathan C Gianneschi5, Francesco Zerbetto1. 1. Dipartimento di Chimica "G. Ciamician", Universita di Bologna, V. F. Selmi 2, 40126 Bologna, Italy. 2. Innovation Partnership Building, The University of Connecticut, Storrs, Connecticut 06269, United States. 3. Department of Materials Science & Engineering, Northwestern University, Evanston, Illinois 60208, United States. 4. Department of Industrial and Manufacturing Engineering, Florida State University, Tallahassee, Florida 32306, United States. 5. Department of Chemistry, Department of Materials Science & Engineering, and Department of Biomedical Engineering, Northwestern University, Evanston, Illinois 60208, United States.
Abstract
Liquid-cell transmission electron microscopy (LCTEM) is a powerful in situ videography technique that has the potential to allow us to observe solution-phase dynamic processes at the nanoscale, including imaging the diffusion and interaction of nanoparticles. Artefactual effects imposed by the irradiated and confined liquid-cell vessel alter the system from normal "bulk-like" behavior in multiple ways. These artefactual LCTEM effects will leave their fingerprints in the motion behavior of the diffusing objects, which can be revealed through careful analysis of the object-motion trajectories. Improper treatment of the motion data can lead to erroneous descriptions of the LCTEM system's conditions. Here, we advance our anomalous diffusion object-motion analysis (ADOMA) method to extract a detailed description of the liquid-cell system conditions during any LCTEM experiment by applying a multistep analysis of the data and treating the x/y vectors of motion independently and in correlation with each other and with the object's orientation/angle.
Liquid-cell transmission electron microscopy (LCTEM) is a powerful in situ videography technique that has the potential to allow us to observe solution-phase dynamic processes at the nanoscale, including imaging the diffusion and interaction of nanoparticles. Artefactual effects imposed by the irradiated and confined liquid-cell vessel alter the system from normal "bulk-like" behavior in multiple ways. These artefactual LCTEM effects will leave their fingerprints in the motion behavior of the diffusing objects, which can be revealed through careful analysis of the object-motion trajectories. Improper treatment of the motion data can lead to erroneous descriptions of the LCTEM system's conditions. Here, we advance our anomalous diffusion object-motion analysis (ADOMA) method to extract a detailed description of the liquid-cell system conditions during any LCTEM experiment by applying a multistep analysis of the data and treating the x/y vectors of motion independently and in correlation with each other and with the object's orientation/angle.
Liquid-cell transmission
electron microscopy (LCTEM) is an emerging
tool for studying solvated nanostructures.[1,2] This
holds promise for examining how these structures form, and undergo
transformations, including through multicomponent reactions and thermally
driven processes.[3−9] One particular area of interest is the in situ imaging
of nanomaterials in motion, during materials chemistry processes,
which can directly reveal the underlying mechanisms and step-wise
kinetics in the system observed. However, development of both experimental
and data analysis tools is needed to enable true particle tracking.
At the core of this is the fact that to form an image by LCTEM, the
beam necessarily should irradiate the sample in a manner that can
influence the behavior of the sample. The presence of artefactual
observation/experimental effects is not unique to LCTEM and is present
in some form in all direct imaging/videography techniques, such as
in situ atomic force microscopy (cantilever-probe artefacts) or in
situ fluorescence microscopy (laser artefacts). In LCTEM specifically,
the incident electrons are scattered by the enclosing windows, the
liquid itself, and the sample within the liquid. These electron–sample
interactions (primarily elastic scattering) give rise to the desired
LCTEM data, signal, and contrast in images and videos, while simultaneously,
the electron beam causes a number of detrimental effects including
(a) radiolysis/ionization reactions of solution, (b) chemical modifications
of solvated nanostructures and windows, (c) charging of window and
nanomaterial, (d) knock-on-damage of inorganic structures, and (e)
nucleation, aggregation, or other transitions related to secondary
(or higher order) reactions that result from radiolysis.[1,2,10,11] LCTEM data are always plagued by electron-beam effects and artifacts
that alter the system being observed, which one generally attempts
to reduce by using low flux conditions. However, the magnitude of
the effects within the irradiated liquid-cell vessel that alter a
system’s dynamic behavior is very difficult to directly probe
experimentally during a LCTEM experiment. In LCTEM videography, subdiffusive
motion consisting of temporary trapping and intermittent walks or
flights have been found in the motion of solvated nanostructures diffusing
at or near the LCTEM windows in both organic and inorganic nanoparticle
(NP) systems.[5,10] Such NP motion behavior, which
is anomalous, altered by artefacts imposed by the experimental system,
has been attributed to secondary charging effects, whereby the incident
beam induces positive window charging, which generates an electric
field within the liquid cell (for insulating windows, e.g., Si3Nx).[11] These occur at the windows and/or on the NPs
themselves, caused by the irradiating electron beam,[5,10,12−14] and/or to changes
in the solution pH/chemistry or the NP or window surface chemistry
from e-beam radiolysis reactions.[15,16] Recent studies
also suggest the presence of spatially-varying electric fields generated
during LCTEM observation, which could have an influence on NP-window
interactions and, hence, NP diffusion.[11] These experiment-specific artefactual phenomena collectively affect
the diffusion of nanoscale objects observed by LCTEM, which we aim
to better understand through the analysis and treatment of experimental
LCTEM data.Herein, we make use of our anomalous diffusion object
motion analysis
(ADOMA), which is a universal method of analyzing real life-hierarchical
distributed time series of a measured quantity. It can be trajectories
of NPs in LCTEM experiments,[5,10] of lipids in bilayer
systems,[17] of fullerenes on gold surfaces,[18] of microsaccadic movements in eye-head control
experiments,[19] of temperature and conductivity
fluctuations of outgassing ions just over the crater of submarine
volcanoes,[20,21] and others. Common in all these
diverse scientific fields is the stochastic character of the quantity
under study, whose nature can be successfully unveiled by ADOMA. We
demonstrate it is now possible to correlate anisotropies in the directional
and rotational components of motion to generate a semiempirical description
of the forces within the LCTEM experimental system that are driving
motion. The diffusion trajectories of NPs in solution can be considered
as the manifestation of a stochastic process; see Figure (right).
Figure 1
Frame from one LCTEM
video of micelles in solution.[5] The shapes
of the micelles are not spherical (left). The
rotational motion of the micelles is monitored by the angle formed
by the main axis of the ellipse and the cell axis (lab frame). The
coordinates in both systems, white axes for lab, and red for body
frame, are shown. Several of the extracted LCTEM micelle trajectories
are depicted on the right (label color indicated LCTEM flux; black
labels for 1.6 e–/Å2 s, blue labels
for 2.6e–/Å2 s, and red labels for
5.6 e–/Å2 s.
Frame from one LCTEM
video of micelles in solution.[5] The shapes
of the micelles are not spherical (left). The
rotational motion of the micelles is monitored by the angle formed
by the main axis of the ellipse and the cell axis (lab frame). The
coordinates in both systems, white axes for lab, and red for body
frame, are shown. Several of the extracted LCTEM micelle trajectories
are depicted on the right (label color indicated LCTEM flux; black
labels for 1.6 e–/Å2 s, blue labels
for 2.6e–/Å2 s, and red labels for
5.6 e–/Å2 s.Their systematic analysis provides information on the nature of
the diffusional motion and the system or environment in which that
motion occurred.[5,10,14,15] In previous work, we analyzed lateral motion
of elliptical (ca. 0.7 aspect ratio) polymeric micelles in water (with
low buffer conc.) from LCTEM videography data, a frame of them is
depicted in Figure (left).[5,10] The results showed that in the majority
of cases, across flux used, ca. 1.6–5.6 e–/Å2 s, micelle motion was subdiffusional, with very
few superdiffusional exceptions.[5,10] Micelle motion often
showed a multifractal character, the result of occasional trapping
periods when the micelle is pinned at the window surface between active
periods of motion. Some of the micelles also exhibit periods of motion
with monofractal nature, specifically fractional Brownian motion (fBm),
driven by fractional Gaussian noise (fGn); see for definitions of
fBm and fGn the seminal work of Mandelbrot.[22] The LCTEM flux was found to affect micelle motion, albeit in a complex
manner. At higher flux, micelles experience fewer and shorter trapping
events reflected on a smoother intermittent structure of walks, while
the character of subdiffusive motion between walks was largely unaffected
by flux. Many questions remain as to how the collective conditions
of an irradiated liquid-cell vessel influence dynamic behaviors, which
we address through a new treatment of the micelle motion trajectories.LCTEM micelle motion captured using TEM cameras occurs at or near
the membrane surface, and the micelles experience a landscape of potential
maxima (barriers) and minima (binding sites), whose effects will be
unique for each micelle because of the amorphous and dynamic arrangement
of chains within micellar assemblies. If a single type of binding
site were present between the micelle and window, then, the distribution
of trapping times, ψ(t), would decrease exponentially.
If instead, there were a broad spectrum of binding sites, the waiting
times would follow a power law distribution, which has been reported
for polymers at solid–liquid interfaces.[23] Motion analysis of molecular dynamics simulations has provided
evidence for the existence of nonequilibrium structures at polymer–solid
interfaces characterized by strong and segment-specific interactions
at the surface, and even single PMMA monomers have been found to bind
to surfaces under long-lived nonequilibrium orientations.[24] Single-molecule tracking at a solid–liquid
interface has shown that molecules undergo intermittent random walks
with non Gaussian displacements, and intermittent hopping has been
proposed as the mechanism of explaining molecular surface diffusion
at a solid–liquid interface.[25] Generally,
power law distributions of both waiting times and length steps are
specific to the dynamics of strongly adsorbed systems over certain
time and length scales,[26] that is, polymer
unimer/micelle motion at a solid window is expected to be anomalous
generally but might be additionally affected by factors specific to
the LCTEM experimental system related to the irradiation of the TEM
beam. Understanding these additional artefactual effects on any system
under observation by LCTEM videography is critical to properly interpret
the LCTEM results. Here, we report a complete video data analysis
methodology to extract a semiempirical description of the energy landscape
within the experimental system in which the motion occurred, which
we apply to understand how electron-beam irradiation affects the liquid-cell
vessel consisting of silicon nitride windows and an aqueous polymer
micelle solution; this methodology is applicable beyond LCTEM and
can be used to extract a semiempirical description of the system conditions
from any experimental video data file that contains observation/experimental
artefacts.ADOMA has been expanded here to separate analyses
of the x- and y- step and rotational
components
of the micelle trajectories, determining their cross-correlations.
The analysis shows a consistent anisotropy of diffusional motion that
exists in {x, y} axes, and that
the mean square displacements and the variances for their two axes
and for all micelles do not scale in the same way, Table . Micelle motion on each respective
axis exhibits similar trends as the overall lateral motion; intermittent
walks are interrupted by trapping events, Figure , and there is no preferential motion direction
over the ensemble of micelles. The directionality of each micelle
in motion is unique and appears to be independent. The analysis showed
that motion in each axis presents a multifractal character indicated
by the specific form of the extracted structure functions, which have
convex shapes when plotted as function of the order of the moment.[5,10] These findings indicate the existence of a complex stochastic process
that results from the multiplication/convolution between at least
two stochastic processes, which are known to reflect complex environments
that favor the appearance of multiple processes evolving at similar
time scales in direct competition.[27−29] Our analysis suggests
that the beam effects (i) convolute the natural state of the liquid-cell
vessel containing polymer micelles by reducing of the potential energy
surface and (ii) alter the electrostatic interactions between micelles
and surface, by inducing a bulk positive window charge and/or by weakening
local hydrogen bonding between micelles and surface.
Table 1
Estimated
Scaling Exponents of MD
(γMD) and MSD (γMSD) According to eq for q = 1 and q = 2, Respectively, and of Variance, (γ),
According to eq a
S10_NP_B
S10_NP_C
S10_NP_D
S11_NP_C
S6_NP_A
x
y
x
y
x
y
x
y
x
y
γMD
0.494
0.660
0.489
0.558
0.551
0.549
0.652
0.491
0.474
0.589
γMSD
0.712
1.084
0.819
0.979
0.834
0.886
1.155
0.696
0.843
0.993
Γ
0.488
0.891
0.677
0.851
0.552
0.713
0.982
0.380
0.727
0.790
zxi,θ(q = 2)
0.583
0.778
0.501
0.629
0.577
0.574
0.649
0.515
0.447
0.583
0.855
0.874
0.852
0.858
0.893
0.860
0.905
0.975
1.00
0.86
Obtained correlation coefficients
for q = 2 of translational and rotational movements,
namely, z(q = 2), z(q = 2), z(q = 2). Correlation coefficients
have been obtained by use of eq .
Figure 2
Time series of absolute
lengths, ξ, of consecutive movements
of micelles at different radiation fluxes show the intermittent structure.
Red/purple for movements in the x and y axes, respectively.
Time series of absolute
lengths, ξ, of consecutive movements
of micelles at different radiation fluxes show the intermittent structure.
Red/purple for movements in the x and y axes, respectively.Obtained correlation coefficients
for q = 2 of translational and rotational movements,
namely, z(q = 2), z(q = 2), z(q = 2). Correlation coefficients
have been obtained by use of eq .
Methods
In complex
environments, experimental and theoretical studies have
shown that the variance, W(t), of
a micelle grows as a power law of time[5,10,17,30−32]where Dγ is a generalized diffusion coefficient in units of L2T–γ, d is the dimension of the space where the motion evolves,
Γ() is the gamma function, and γ is the exponent classifying
the motion; subdiffusion for 0 < γ < 1, linear or Brownian
under certain circumstances for γ = 1, and superdiffusion for
1 < γ < 2. For discrete data sets, eq can be obtained as the time average, eq where N is the total number
of points of the trajectory, and τ is the time lag taking values
up to N/10.[5,10,17,30] In eq , is
the mean-squared displacement (MSD)
or second moment, and is the mean
displacement (MD) or first
moment. MD and MSD may scale similarly to eq , with exponents γMD and
γMSD. When γMSD = 2γMD, then variance and MSD scale with the same exponent, γ, and
the process is monofractal—a unique scaling exponent exists.
We consider the norm of the displacements, ∥ΔX(τ)∥ = |X(n + τ)
– X(n)|, n = 1, 2, ..., N – τ,
where X stands either
for x or for y axes or for θ,
where θ is the orientation angle formed by the lab frame and
the body frame, Figure . Notice that ξ = ∥ΔX(1)∥ is illustrated in Figure . By hypothesis, the moments of order q > 0 of the displacement depend only on the time increment
τ. We introduce the structure function z(q) defined as[33−36]The form of z(q), which is also
written as z(q) = qH(q) with H(q)
being the generalized Hurst exponent, provides insights into the kind
of random motion, see below. If H(q) is not a linear function of q, then multiple scales
exist and this property is called intermittency.[34]Eq is a
generalization of eq , and the scaling exponents γMSD and γMD are connected to the value of z(q) for specific moments, namely, z(q = 2) = γMSD, z(q = 1) = γMD. Classically, MSD is obtained
and whenever it is z(q = 2) = 1,
the process is classified as Brownian motion. Anomalous diffusion
starts when z(q = 2) ≠ 1.[28,29] The condition z(q = 2) = 1 is
not strong to characterize the whole process as Brownian;[37] it is better the characterization be carried
out by using the full form of the structure function. Some special
forms of the z(q) provide direct
classification of the type of the stochastic process underlying the
motion. H(q) = 0 implies z(q) = 0, and the process corresponds to
a stationary one. If H(q) = H, then, z(q) = Hq, and the process is classified as fractional Brownian
Motion (fBm)—monofractal process—and is further characterized
as subdiffusive for 0 < H < 0.5, Brownian for H = 0.5, and superdiffusive for 0.5 < H < 1. If z(q) is a bilinear
function of the order of the moment, then if the slope of the second
line is higher than that of the first one, then the process corresponds
to a Lévy Walk (LW). If instead, the slope of the second line
is zero, then motion is classified as Lévy Flights (LFs).[38,39] Any departure from linearity is a strong indicator against Brownian,
fractional Brownian, Lévy, and fractional Lévy models,
which all are additive. A convex shape of z(q) as function of the order of the moment, bending over
linearity, underlines multifractality and thus classifies multiplicative
processes. Multifractals can be seen as a one-to-one mapping of a
monoscaling process to a multiscale one. Such is, for example, a compound
fractional Brownian motion, BfBm(τ),
whose time variable, τ, corresponds to the accumulation of a
distribution g(t) from 0 to t, τ(t) = ∫0g(t′)dt′, where g(t) is an α-stable
Lévy distribution with 0 ≤ α ≤ 2.[40] Multifractals are nonstationary, nonlinear,
and nonadditive random processes. Among them, universal multifractals
are likely to be ubiquitous, and their structure function reads[41]where H is the mean
fluctuation
exponent, H = z(q = 1), and it plays the role of the Hurst exponent. For H = 0, the time series are stationary, while for H ≠ 0, the resulted time series correspond to fractional integration
of stationary increments. C takes only positive values
and indicates intermittency; the higher the value of C, the stronger the intermittent effects. The Lévy index α
indicates the class to which the probability distribution belongs
to. It provides information about the relative variation of intermittency
around the mean. If α = 0, the structure function describes
a monofractal process. For α = 1, the structure function reads z(q) = Hq – Cq log(q) and the variation of intermittency
around the mean draws steps from a Cauchy–Lorentz distribution.
For α = 2, a log-normal distribution describes intermittency
variations around the mean.[42] For the estimate
of eq , we use the following
time average[5,10,17,36]Equation provides
the moments, mq(τ), as a function
of the elapsed time, for (i) the autocorrelation, which is obtained
when X(n) = Y(n). The extracted moments are then fitted to a power law of the form
τ, where the
exponent z(q) is the value of the
structure function for the moment q. We obtain moments
in the range 0.25 ≤ q ≤ 3. We estimate
the structure functions z(q), z(q), and zθ(q) for the movements in x and y axes as well for the rotational ones, and for (ii) the cross-correlation
of X(n) and Y(n), when X(n) ≠ Y(n).[43,44] Following the same procedure
as above, we estimate the function z(q) = qH(q), where H(q)
is the bivariate Hurst exponent. Its value for q =
2 can indicate (a) whether the time series are uncorrelated, correlated,
or anticorrelated and (b) whether X(n) and Y(n) have the same stochastic mechanism. If z(q =
2) is close to 0.5, the time series, X(n) and Y(n), are uncorrelated. They are
anticorrelated for a value lower than 0.5 and correlated for a value
higher than 0.5. The stochastic processes have the same origin if z(q)
≈ {z(q) + z(q)}/2.[43,44]
Results and Discussion
LCTEM experiments involving solvated
block copolymer micelles in
dPBS buffered water (using SiNx windows and 200 keV) were conducted
at three electron flux, 1.6 e–/Å2 s (i.d. S10_NP_B, S10_NP_C, and S10_NP_D), 2.6 e–/Å2 s (i.d. S11_NP_C, S6_NP_A, S6_NP_E, and S6_NP_F),
and 5.6 e–/Å2 s, (i.d. S2_NP_A,
and S2_NP_E).[5] LCTEM videos of micelle
motion were recorded at 1 fps (frame per second), frame exposure time
of 0.3 s (ca. 0.7 s dead time), with nanometer spatial resolution,
and the spatial coordinates (x, y trajectories, Figure right) of the micelles were extracted for each micelle using multiobject
tracking analysis (MOTA),[45,46] details are given in
Section I of Supporting Information. LCTEM
necessarily employs projection [transmission] imaging, where only
buoyant trajectories sustained in the plane perpendicular to the beam
can be recorded (x–y diffusion).
LCTEM video files are available in the Supporting Information of Parent
et al.[5]Analysis of the raw LCTEM
data show that micelle motion for both
the x, y axes possess intermittent structures of
step lengths between consecutive movements (Figure ). These structures change form for the different
radiation fluxes, indicating a flux dependence on micelle LCTEM motion.For low flux, motion consists of significant periods of complete
immobilization (trapping events, which could be associated to multiple
binding sites), interrupted by long jumps. Instead, for high flux,
micelles are not immobilized, and motion consists of nonvanishing
small jumps interrupted by long ones. At the two lower flux examined
here (1.6, 2.6 e–/Å2 s), trapping
events are associated with long-tailed distributions of waiting times,ψ(t), for all micelles; three representative examples are
depicted in Figure .
Figure 3
Waiting times distribution ψ(t) versus the
elapse time t for three representative examples.
Color code: red for the lateral motion of a micelle, purple for the
motion in the x axis, and green for the motion in
the y axis.
Waiting times distribution ψ(t) versus the
elapse time t for three representative examples.
Color code: red for the lateral motion of a micelle, purple for the
motion in the x axis, and green for the motion in
the y axis.The obtained scaling exponents differentiate the motion in the x and y axes. Notice that the scaling exponent
for lateral motion is different than those describing movements in
each perspective axis, a fact that highlights specific-segment type-like
interactions between the micelle and the membrane, which must be anisotropic
and heterogeneous (zwitterionic) across the window surface at these
flux conditions.Independent of the radiation flux, the second
moment (MSD) and
the variance of the motion in both x and y axes do not scale with the same exponent for the majority
of the micelles (Figure , Table ) further
indicating anomalous character of the motion.
Figure 4
Ratio of the scaling
exponents, γMD,/γMD, (red squares) and γMSD,/γMSD, (green rhombs)
is illustrated. The i.d. of each micelle is indicated in the vertical
axis of the graph, and the color code stands for the different irradiation
flux; orange for 1.6 e–/Å2 s, dark
green for 2.6 e–/Å2 s, and light
blue for 5.6 e–/Å2 s.
Ratio of the scaling
exponents, γMD,/γMD, (red squares) and γMSD,/γMSD, (green rhombs)
is illustrated. The i.d. of each micelle is indicated in the vertical
axis of the graph, and the color code stands for the different irradiation
flux; orange for 1.6 e–/Å2 s, dark
green for 2.6 e–/Å2 s, and light
blue for 5.6 e–/Å2 s.We note that normal diffusion (Brownian motion) in the case
of
raw data recorded by experimental imaging techniques, which contain
noise and blur because of imperfect optics and cameras, might appear
to be anomalous. In such cases, the origin of this discrepancy is
either because of static localization error or dynamical error (blur
motion).[47−49] This scenario has been extensively considered here
by using well-established methods[47−51] and has been discarded as origin of the anomalous
motion; see detailed analysis and discussion at Sections II and III
of Supporting Information.Further
analysis of the raw LCTEM data, see Section IV of Supporting Information for details, delivered
two key findings: (i) micelle motion does have anomalous character;
for all micelles, the relation γMSD ≠ 2γMD holds true for movements in the x and y axes, and (ii) for low radiation flux, trapping events
are associated with power law distributions of waiting times, Figure , while immobilization
becomes rather a rare event for higher irradiation flux. Trapping
events can be an indication of continuous time random walk,[52] which is a nonergodic process and is associated
to ageing effects, which is a characteristic property of nonstationary
stochastic processes.[28,53,54] Ageing is not observed in the data here likely because of the energy
(window charging, generating E-field) continuously
provided by the sustained electron beam, which reduces the number
of trapping events as a function of its strength (e.g., flux); however,
when the time series are reversed, ageing effects clearly appear;
see Section IV of Supporting Information. Time reversal of the series starts from a situation, tfinal, where the effect of the e-beam has been continuously
summed and goes toward a situation, tinitial, where the same effect is constantly decreased. The accumulated
energy delivered by the beam reduces the number of trapping events,
an action likely connected with the effect of the beam on the windows.
Window charging of insulating LCTEM Si3Nx windows by the electron
beam is largely uniform across irradiated area that is within the
field of view of the TEM video camera,[11] generating a positive potential that can begin to overpower the
effective pinning strength of local surface traps with increasing
flux. This argument is strengthened by the fact that for the highest
flux used here, power law distributions of waiting times have not
been found. Figure indicates the influence of flux on window–micelle interactions,
which has been previously observed.[10]Figure shows the
ratio γMD,/γMD, and γMSD,/γMSD, for movements in the x and y axes. The value of 1 for these ratios indicates that movements in x and y axes scale in the same way. When
both ratios take values close to 1 but the relation γMSD ≠ 2γMD does not hold true, then the ratio
of the corresponding scaling exponents for the variance is different
than one, as is the case for the micelles with i.d. S10_NP_D and S6_NP_F.
Such complex behavior, apart from the anomalous character of the motion,
underlines the necessity of using the full range of moments in characterizing
the type of motion. Furthermore, for all micelles, the extracted values
of these ratios highlight the existence of a consistent anisotropy
in motion in x and y axes.Figure shows z(q), z(q), z(q), and ztheor(q), which are the estimated
structure functions for micellar motion, calculated via eqs –5. The obtained structure function for rotational motion indicates
stationary process for all micelles, zθ,θ(q) ≈ 0 for all q’s,
and are not drawn. Each structure function has been fitted by eq , and the obtained parameters H, C, and α are listed in Table , where the structure
functions for cross-correlations between translational and rotational
movements, z(q) and z(q), are also listed. All structure
functions have convex shapes as functions of the order of the moment,
except z(q) and z(q) for micelle S6_NP_E. The convex
shape of structure function confirms the multifractal character of
micelles’ motion. Furthermore, the estimated structure functions
differ for motion across the x and y axes, reaffirming the existence of persistent anisotropy.
Figure 5
Structure functions
for motion in x, y axes; red for z, and green
for z. In blue, the cross-correlation of movements
in x and y axes. In violet, the
theoretical value of the cross-correlation ztheor(q) = (z(q) + z(q))/2. Notice that zθ,θ(q) is not illustrated because it takes zero values
for all q’s.
Table 2
Analytical Forms of all Obtained Structure
Functions are Provideda
S10_NP_B
S10_NP_C
S10_NP_D
S11_NP_C
S6_NP_A
Zx,x(q)
0.489q – 0.184q log(q)
0.486q – 0.106q log(q)
0.549q – 0.192q log(q)
0.644q – 0.062 (q2 – q)
0.473q – 0.077q log(q)
Zy,y(q)
0.660q – 0.167q log(q)
0.558q – 0.095q log(q)
0.550q – 0.156q log(q)
0.476q – 0.121 (q2 – q)
0.587q – 0.135q log(q)
Zx,y(q)
0.562q – 0.229q log(q)
0.523q – 0.129q log(q)
0.554q – 0.151q log(q)
0.575q – 0.082 (q2 – q)
0.551q – 0.074q log(q)
Zx,θ(q)
0.397q – 0.145q log(q)
0.318q – 0.095q log(q)
0.358q – 0.102q log(q)
0.352q – 0.027 (q2 – q)
0.252q – 0.043q log(q)
Zy,θ(q)
0.486q – 0.132q log(q)
0.362q – 0.065q log(q)
0.340q – 0.074q log(q)
0.289q – 0.032 (q2 – q)
0.325q – 0.032 (q2 – q)
For α = 1, the structure function
has the form z(q) = Hq – Cq log(q), for α
= 0 z(q) = Hq,
and for α = 2 z(q) = Hq – C(q2 – q).
Structure functions
for motion in x, y axes; red for z, and green
for z. In blue, the cross-correlation of movements
in x and y axes. In violet, the
theoretical value of the cross-correlation ztheor(q) = (z(q) + z(q))/2. Notice that zθ,θ(q) is not illustrated because it takes zero values
for all q’s.For α = 1, the structure function
has the form z(q) = Hq – Cq log(q), for α
= 0 z(q) = Hq,
and for α = 2 z(q) = Hq – C(q2 – q).In addition to surface chemistry, the shape and size of a nano-object
can also influence its diffusional motion,[55] which can become increasingly influential in spatially confined
or anisotropic environments, such as the liquid-cell enclosure under
e-beam irradiation. In Figure (left), micelles are marked with red rings (by MOTA algorithm),
their major and minor axes are indicated by red vectors (body frame), x and y coordinates in the lab frame are
shown by white vectors, and the orientation angle between the two
frames is given by the angle θ. In an isotropic liquid phase,
the (local) anisotropy in the diffusion of a nano-object is usually
averaged out on a rapid timescale that ranges from the picosecond
to the milliseconds, depending on the size of the object. A rough
estimate of the time needed for a full rotation, τrot, can be made through the rotational diffusion coefficient Dr = (kBT)/(8πηR3) = 1/τrot, where η is the media viscosity, R is the particle radius, T is the absolute temperature,
and kB is the Boltzmann constant. The
time for a full rotation of a [nanoscale] micelle is in the sub-milliseconds
range.[56] The viscosity of the solution
in liquid-cell experiments can potentially increase with decreasing
cell thickness, though this effect is not well understood.[12,57,58] Local window inhomogeneities,
in the form of surface defects and different surface moieties, can
create interactions that increase the time required for averaging.[5,10,59−61]Analysis
finds a substantial degree of persistent anisotropy in
the motion for all micelles that is the propensity of a micelle to
move more easily in one direction (x or y) than the other (scaling exponents of variance listed in Table ). The motion anisotropy
persists for lag times up to ca. ∼ 30 s or longer. Motion anisotropy
at such a protracted time scale in a bulk fluid (not confined or irradiated)
would require a solution medium with viscosity of 30 Pa s, 4 orders
of magnitude greater than that of [lightly buffered] water at room
temperature, a viscosity value that is clearly erroneous. This finding
highlights the deviation from bulk-like motion of nano-objects in
LCTEM experiments, and the danger in treating the data with the assumption
that bulk conditions apply; interpretation will be unsound.[62,63]Rotations, changes in the angle θ in time, are described
as a sequence of stochastic events whose positional values are restricted
in the range [0:180] degrees for elliptical objects with mirror symmetry.
A full 360° rotation of any micelle is never observed during
the timescale of all the LCTEM experiments at all flux used. The analysis,
by means of application of eq , shows that all rotational motions are weakly or strongly
stationary-each micelle’s elliptical orientation remains largely
fixed during x/y motion (the calculated
scaling exponents are zero or close to zero). Some representative
examples are shown at Section V of Supporting Information for individual micelles. The cross-correlation
analysis of rotations with the translational motions returns values
of z(x,θ)(q = 2), x = x, y, within
the range 0.447–0.778. A value of z(x,θ) (q = 2) ≈ 0.5 defines uncorrelated rotational and translational
motions. This relation is not strict for short time series, and time
series can be considered as uncorrelated for values lying within a
broader range, let say 0.45 ≤ z(x,θ) (q = 2) ≤
0.55. The obtained cross-correlation coefficients z(x,θ) (q = 2) mark two trends: (i) uncorrelated rotational and
translational motions are found either on both axes or on one of them,
or (ii) translational and rotational motion are correlated on both
axes. There is not a single case in which rotations are correlated
with translations in one axis and anticorrelated in the second one.
The latter is in line with the appearance of strong correlation between
motions in the x and y axes; see
values of z(x,y)(q = 2) in Table . For micelle S6_NP_E, the cross-correlation coefficient
indicates uncorrelated rotational and translational movements in both
axes. For micelle S10_NP_D, rotations have the same slightly correlated
dependence with translational motions in both axes. For a number of
micelles (S10_NP_C, S11_NP_C, S6_NP_D), rotations are uncorrelated
with translations in one axis and correlated with translations in
the second one. For the rest of the micelles, rotations are correlated
with translations in both axes, but correlations are stronger in one
of them. Micelles move faster across that axis, creating the higher
correlation with rotational movements. However, the faster axis is
usually identified as the minor (y) axis of the elliptical
structure of the micelle. Exception is micelle S3_NP_A, where the
structure function (Table ) says that the intermittency parameter C in y axis is almost the double of that of x axis. The linear terms of the structure function, 0.551
and 0.530 for x and y, respectively,
designate processes driven by slightly persistent fractional Gaussian
noises (fGn). This effect in the absence of any intermittency would
deliver almost Brownian motions with scaling exponent 1.10/1.06. The
rising of the anomalous character of the motion and accordingly its
differentiation across x and y axes
is because of intermittent events caused by the interactions of the
micelle with the membrane.The relation z(q =
2) ≈ ztheor(q = 2) = {z(q = 2) + z(q = 2)}/2 holds for
all trajectories and for q ≤ 1.5. For some
trajectories, there exist deviations for higher order moments (q ≥ 1.5), indicating that the differentiation of
motion in x and y axes is likely
result of some large steps undertaken in one of the axes.[33] The structure function for the cross-correlation
of movements in x and y axes shows
also a multifractal structure. Note that for all micelles, S6_NP_F
is an exception, the linear term of the structure function is close
to 0.5 (Table ), and
reflects a cross-correlation coefficient, q = 2,
close to 1 (perfect correlation) if the C term were
zero. Intermittency reduces this value of the coefficient (see Table ), but it still highlights
a highly correlated structure between motion in the x and y axes.The higher the intermittency
parameter C, the
slower the motion. For all examined trajectories, a consistent anisotropy
with respect to the obtained values of the parameter C is observed in both the x and y axes. The anisotropy imposed by intermittent events is then reflected
on the scaling laws across each axis. For the higher flux used here,
the intermittent structure is washed out with respect to the lower
flux and scaling law anisotropy tends to converge.Prior analysis
of LCTEM data has classified object motion as surface-mediated
motion,[5,10,15,16] micelle–window interactions, compounded by
the effects of TEM irradiation of sample, solution, and windows. The
forms of the obtained structure functions here for all micelles confirm
this argument. The multifractal character of the motion points to
multiplicative effects between fGn with α-stable Lévy
distributions for 0 < α ≤ 2. Two values of α
have been identified in the present study: α = 1, which returns
a Cauchy–Lorentz distribution, and α = 2, which returns
a log-normal distribution (Kolmogorov). One can partly attribute the
origin of the fGn to solution molecules. However, there is not a clear
sign how TEM irradiation (radiolysis, and/or window charging, reducing
H-bonding, etc.) affects these terms, and consequently, micelle’s
motion. For low and intermediate flux, there is evidence (Table ) of strong anisotropy
in the linear terms of the structure functions with respect to motion
in x and y axes, where fGn goes
from antipersistent (slow axis) to persistent (fast axis). For the
same flux, there are also micelles for which the linear terms are
quite similar, indicating either antipersistent or persistent fGn.
Assuming the effect of TEM irradiation on each water solution molecule
is the same, the resulting variations must be because of interactions
between the micelles and the membrane. For high flux, this anisotropy
weakens and the corresponding linear terms take values very close
to white noise (0.5). LCTEM irradiation conditions do not directly
drive the motion of micelles; however, through their secondary effects
on the solution/polymer or the cell’s windows, and in conjunction
with viscoelastic properties of liquid-cell environment, the irradiation
conditions shape the overall multifractal character of motion. E-beam
irradiation disturbs the liquid-cell vessel, maintaining it constantly
out of equilibrium, thus affecting the length scale of interaction.
This, in turn, is the origin of anisotropy and is described by long-range
correlations and power law distributions.An interesting feature
of the system investigated here is that
the micelles are zwitterionic, structurally amorphous, and are less
polarizable than the metal-core NPs often studied in LCTEM experiments.[12,15,16] The nature of the motion along
a given direction is mainly affected by secondary effects of the e-beam
irradiation conditions, via the direct reduction of the potential
energy surface, caused by bulk positive window charging, or by the
breaking of chemical/hydrogen bonds and altering electrostatic surface
interactions. Unconstrained rotational motion would wash out any motion
anisotropy in a submicrosecond time domain, leading to isotropic motion.[56] Instead, anisotropy persists for at least ∼30
s and rotational motion itself is either uncorrelated or correlated
approximately by the same amount in both axes, indicating constrained
rotational motion. We also note that intrinsic anisotropy in micelles’
shape likely affects motion’s anisotropy. Assuming the membrane
has a roughly homogeneous distribution of pinning sites, it is anticipated
that a larger number of binding sites will exist across the longer
axis, leading to higher intermittent structures. For low and intermediate
flux, the abovementioned argument is in line with the obtained scaling
exponents; motion is highly anistropic, suggesting the dominance of
the binding sites in directing motion. At the higher flux, however,
we find that micelle binding behavior is largely the same for both
axes, indicating that the beam has begun to significantly alter the
pinning sites and reduce their effective strengths.
Conclusions
In summary, diffusional motion in an LCTEM experimental system
was investigated using multifractal analysis (ADOMA) of video data
to extract semiempirical descriptions of the energy landscape during
in situ LCTEM observation. The results indicate that imaging conditions,
even at the low flux used here, alter the kinetics of nonspherical
nano-objects. This is the result of secondary beam effects. We find
that micelles in LCTEM exhibit intermittent jumps throughout their
motion trajectories, which become less frequent at increasing flux
(smoother motion). Intermittent jumps are responsible for establishing
motion anisotropy in both axes. The obtained structure functions call
for intermittent events drawing steps from an α-stable Lévy
distribution, whose time variable is the operational time of environmental
fractional Gaussian noise. The motion analysis methodology that we
describe provides a more complete understanding of the nature of the
dynamical processes observed by LCTEM. Similar shape-anisotropy effects
on motion are likely to be present across materials systems at the
nanoscale and not only in polymeric micelles. The mathematic treatment
that we have introduced has been shown to be effective in extracting
insights into the origins of the [experimental] system-specific motion
anomalies and can be applied across systems to the treatment of LCTEM
videography data broadly.
Authors: Ana Lorena Urbano-Bojorge; Oscar Casanova-Carvajal; Nazario Félix-González; Laura Fernández; Rodrigo Madurga; Santiago Sánchez-Cabezas; Elena Aznar; Milagros Ramos; José Javier Serrano-Olmedo Journal: Nanotechnology Date: 2018-06-27 Impact factor: 3.874
Authors: Alessandro Ianiro; Hanglong Wu; Mark M J van Rijt; M Paula Vena; Arthur D A Keizer; A Catarina C Esteves; Remco Tuinier; Heiner Friedrich; Nico A J M Sommerdijk; Joseph P Patterson Journal: Nat Chem Date: 2019-02-18 Impact factor: 24.427