Literature DB >> 33825707

Depth-of-field extension in optical imaging for rapid crystal screening.

Chen Li1, Changqin Ding1, Minghe Li1, Jiayue Rong1, Hilary Florian1, Garth Simpson1.   

Abstract

The depth of field (DoF) was extended 2.8-fold to achieve rapid crystal screening by retrofitting a custom-designed micro-retarder array (µRA) in the optical beam path of a nonlinear optical microscope. The merits of the proposed strategy for DoF enhancement were assessed in applications of second-harmonic generation imaging of protein crystals. It was found that DoF extension increased the number of crystals detected while simultaneously reducing the number of `z-slices' required for screening. Experimental measurements of the wavelength-dependence of the extended DoF were in excellent agreement with theoretical predictions. These results provide a simple and broadly applicable approach to increase the throughput of existing nonlinear optical imaging methods for protein crystal screening.

Entities:  

Keywords:  crystal screening; depth-of-field extension; high throughput

Mesh:

Substances:

Year:  2021        PMID: 33825707      PMCID: PMC8025887          DOI: 10.1107/S2059798321000097

Source DB:  PubMed          Journal:  Acta Crystallogr D Struct Biol        ISSN: 2059-7983            Impact factor:   7.652


  16 in total

1.  Two-photon excitation fluorescence microscopy with a high depth of field using an axicon.

Authors:  Pascal Dufour; Michel Piché; Yves De Koninck; Nathalie McCarthy
Journal:  Appl Opt       Date:  2006-12-20       Impact factor: 1.980

2.  A method for the general identification of protein crystals in crystallization experiments using a noncovalent fluorescent dye.

Authors:  Matthew R Groves; Ingrid B Müller; Xandra Kreplin; Jochen Müller-Dieckmann
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-03-16

3.  UV laser-excited fluorescence as a tool for the visualization of protein crystals mounted in loops.

Authors:  Xavier Vernede; Bernard Lavault; Jeremy Ohana; Didier Nurizzo; Jacques Joly; Lilian Jacquamet; Franck Felisaz; Florent Cipriani; Dominique Bourgeois
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-02-22

Review 4.  Micro-crystallography comes of age.

Authors:  Janet L Smith; Robert F Fischetti; Masaki Yamamoto
Journal:  Curr Opin Struct Biol       Date:  2012-09-26       Impact factor: 6.809

Review 5.  Screening of protein crystallization trials by second order nonlinear optical imaging of chiral crystals (SONICC).

Authors:  Levi M Haupert; Garth J Simpson
Journal:  Methods       Date:  2011-11-17       Impact factor: 3.608

6.  Nonlinear optical imaging of integral membrane protein crystals in lipidic mesophases.

Authors:  David J Kissick; Ellen J Gualtieri; Garth J Simpson; Vadim Cherezov
Journal:  Anal Chem       Date:  2010-01-15       Impact factor: 6.986

7.  Disparities of Single-Particle Growth Rates in Buried Versus Exposed Ritonavir Crystals within Amorphous Solid Dispersions.

Authors:  Scott R Griffin; Nita Takanti; Sreya Sarkar; Zhengtian Song; Andrew D Vogt; Gerald D Danzer; Garth J Simpson
Journal:  Mol Pharm       Date:  2020-11-05       Impact factor: 4.939

8.  Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.

Authors:  Jose M Martin-Garcia; Chelsie E Conrad; Garrett Nelson; Natasha Stander; Nadia A Zatsepin; James Zook; Lan Zhu; James Geiger; Eugene Chun; David Kissick; Mark C Hilgart; Craig Ogata; Andrii Ishchenko; Nirupa Nagaratnam; Shatabdi Roy-Chowdhury; Jesse Coe; Ganesh Subramanian; Alexander Schaffer; Daniel James; Gihan Ketwala; Nagarajan Venugopalan; Shenglan Xu; Stephen Corcoran; Dale Ferguson; Uwe Weierstall; John C H Spence; Vadim Cherezov; Petra Fromme; Robert F Fischetti; Wei Liu
Journal:  IUCrJ       Date:  2017-05-24       Impact factor: 4.769

9.  Protein structure determination by electron diffraction using a single three-dimensional nanocrystal.

Authors:  M T B Clabbers; E van Genderen; W Wan; E L Wiegers; T Gruene; J P Abrahams
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-08-15       Impact factor: 7.652

10.  Volumetric chemical imaging by stimulated Raman projection microscopy and tomography.

Authors:  Xueli Chen; Chi Zhang; Peng Lin; Kai-Chih Huang; Jimin Liang; Jie Tian; Ji-Xin Cheng
Journal:  Nat Commun       Date:  2017-04-24       Impact factor: 14.919

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