| Literature DB >> 33823873 |
Yosuke Hirasawa1, Ian Pagano2, Runpu Chen3, Yijun Sun3, Yunfeng Dai4, Amit Gupta5, Sergei Tikhonenkov6, Steve Goodison7, Charles J Rosser8,9, Hideki Furuya1.
Abstract
BACKGROUND: Due to insufficient accuracy, urine-based assays currently have a limited role in the management of patients with bladder cancer. The identification of multiplex molecular signatures associated with disease has the potential to address this deficiency and to assist with accurate, non-invasive diagnosis and monitoring.Entities:
Keywords: Biomarkers; Bladder cancer; Multiplex; Protein; Urinalysis
Mesh:
Substances:
Year: 2021 PMID: 33823873 PMCID: PMC8025333 DOI: 10.1186/s12967-021-02796-4
Source DB: PubMed Journal: J Transl Med ISSN: 1479-5876 Impact factor: 5.531
Fig. 1Flow diagram of phases project. Gene expression profiling (Affymetrix U133 Plus 2.0 arrays) followed by quantitative PCR verification, and glycoprotein profiling (dual-lectin affinity chromatography and liquid chromatography/tandem mass spectrometry) followed by Western blot analysis or ELISA verification were used to discover and validate RNA and protein expression profiles associated with bladder cancer. Data integration informed the selection of a 19-biomarker panel for testing which was narrowed to 10 protein biomarkers which has been validated in independent cohorts using commercial ELISA assays or custom-designed multiplex assay. The resulting Oncuria™assay used in this study has been analytically validated
Demographic and clinical-pathologic characteristics of study cohorts
| Variable | Value | Bladder Cancer | Non-Cancer Control | P | ||
|---|---|---|---|---|---|---|
| N = 46 | N = 316 | |||||
| Age | 18–54 | 4 | 8.7 | 141 | 44.6 | |
| Age | 55–64 | 12 | 26.1 | 96 | 30.4 | |
| Age | 65–74 | 17 | 37.0 | 47 | 14.9 | |
| Age | 75 + | 13 | 28.3 | 32 | 10.1 | |
| Sex | Female | 11 | 23.9 | 79 | 25.1 | 0.86 |
| Sex | Male | 35 | 76.1 | 236 | 74.9 | 0.86 |
| Race | White | 31 | 67.4 | 70 | 22.2 | |
| Race | Other | 15 | 32.6 | 246 | 77.8 | |
| Stage | 0 | 15 | 34.1 | |||
| Stage | 1 | 12 | 27.3 | |||
| Stage | 2–3 | 17 | 38.6 | |||
| Grade | Low | 9 | 19.6 | |||
| Grade | High | 37 | 80.4 |
Bold values indicate significant
Mean urinary (± SD) concentrations of 10 biomarkers assessed by Oncuria™ in cohort of 362 subjects
| Biomarker | Detectable | Mean | Bladder Cancer | Mean | Non-Cancer Control | P |
|---|---|---|---|---|---|---|
| N = 46 | N = 316 | |||||
| SD | SD | |||||
| MMP9 | 64.3 | 1,237.2 | 2,191.7 | 143.0 | 1,304.3 | |
| CXCL8/IL8 | 84.4 | 681.0 | 1,376.4 | 90.3 | 582.5 | |
| VEGFA | 88.6 | 1,003.9 | 2,743.3 | 127.8 | 261.3 | |
| IX/CA9 | 40.6 | 8,979 | 35,518 | 0.843 | 2.016 | 0.09 |
| SDC1 | 99.3 | 9,461 | 6,415 | 8,707 | 4,455 | 0.44 |
| PAI1 | 71.7 | 1,169.8 | 2,803.0 | 29.8 | 132.9 | |
| ApoE | 95.7 | 16,627 | 35,895 | 1,014 | 2,001 | |
| A1AT | 93.2 | 179,562 | 236,921 | 33,742 | 67,463 | |
| ANG | 81.8 | 1,800.4 | 3,170.3 | 194.7 | 464.7 | |
| MMP10 | 57.7 | 52.79 | 200.47 | 4.92 | 8.88 | 0.12 |
Bold values indicate significant
Performance of Oncuria™ for bladder cancer detection
| Biomarker | Area under the curve | 95% Confidence interval | No. of correctly predicted events | No. of correctly predicted nonevents | No. of nonevents predicted as events | No. of events predicted as nonevents | Sen | Spec | PPV | NPV |
|---|---|---|---|---|---|---|---|---|---|---|
| MMP9 | 0.78 | [0.70 0.86] | 30 | 267 | 48 | 15 | 0.67 | 0.85 | 0.38 | 0.95 |
| CXCL8/IL8 | 0.82 | [0.76 0.88] | 33 | 256 | 59 | 12 | 0.73 | 0.81 | 0.36 | 0.96 |
| VEGFA | 0.71 | [0.64 0.79] | 39 | 156 | 159 | 6 | 0.87 | 0.50 | 0.20 | 0.96 |
| IX/CA9 | 0.76 | [0.69 0.83] | 26 | 268 | 47 | 19 | 0.58 | 0.85 | 0.36 | 0.93 |
| SDC1 | 0.55 | [0.44 0.66] | 45 | 37 | 278 | 0 | 1.00 | 0.12 | 0.14 | 1.00 |
| PAI1 | 0.89 | [0.83 0.95] | 35 | 283 | 32 | 10 | 0.78 | 0.90 | 0.52 | 0.97 |
| ApoE | 0.89 | [0.84 0.94] | 33 | 282 | 33 | 12 | 0.73 | 0.90 | 0.50 | 0.96 |
| A1AT | 0.82 | [0.76 0.88] | 33 | 241 | 74 | 13 | 0.73 | 0.77 | 0.31 | 0.95 |
| ANG | 0.84 | [0.78 0.90] | 38 | 222 | 93 | 7 | 0.84 | 0.70 | 0.29 | 0.97 |
| MMP10 | 0.73 | [0.64 0.82] | 24 | 292 | 23 | 21 | 0.53 | 0.93 | 0.51 | 0.93 |
| 10-biomarker combination | 0.93 | [0.87 0.98] | 39 | 290 | 25 | 6 | 0.87 | 0.92 | 0.61 | 0.98 |
| 10-biomarker combination + 3 demographic features | 0.95 | [0.90 1.00] | 42 | 292 | 23 | 3 | 0.93 | 0.93 | 0.65 | 0.99 |
Univariate analysis of the three demographic factors and 10 biomarkers in cancers and controls
| Variable | Value | Total N | Column % | Cancer N | Row % | OR | LCL | UCL | P |
|---|---|---|---|---|---|---|---|---|---|
| Age | 18–54 | 145 | 40.1 | 4 | 2.8 | 0.07 | 0.02 | 0.23 | |
| Age | 55–64 | 108 | 29.8 | 12 | 11.1 | 0.31 | 0.13 | 0.74 | |
| Age | 65–74 | 64 | 17.7 | 17 | 26.6 | 0.89 | 0.38 | 2.08 | 0.79 |
| Age | 75 + | 45 | 12.4 | 13 | 28.9 | 1.00 | |||
| Sex | Female | 90 | 24.9 | 11 | 12.2 | 0.94 | 0.46 | 1.94 | 0.86 |
| Sex | Male | 271 | 75.1 | 35 | 12.9 | 1.00 | |||
| Race | White | 101 | 27.9 | 31 | 30.7 | 7.26 | 3.71 | 14.21 | |
| Race | Other | 261 | 72.1 | 15 | 5.7 | 1.00 | |||
| MMP9 (pg/mL) | < 4,681.7 | 351 | 98.3 | 41 | 11.7 | 1.00 | |||
| M | ≥ 4,681.7 | 6 | 1.7 | 5 | 83.3 | 37.80 | 4.31 | 331.63 | |
| CXCL8/IL8 (pg/mL) | < 3,166.3 | 355 | 98.3 | 42 | 11.8 | 1.00 | |||
| ≥ 3,166.3 | 6 | 1.7 | 4 | 66.7 | 14.90 | 2.65 | 83.87 | ||
| VEGFA (pg/mL) | < 1,837.5 | 350 | 98.3 | 41 | 11.7 | 1.00 | |||
| ≥ 1,837.5 | 6 | 1.7 | 5 | 83.3 | 37.68 | 4.30 | 330.57 | ||
| IX/CA9 (pg/mL) | < 22.429 | 351 | 97.5 | 38 | 10.8 | 1.00 | |||
| ≥ 22.429 | 9 | 2.5 | 8 | 88.9 | 65.89 | 8.02 | 541.31 | ||
| SDC1 (pg/mL) | < 70,803 | 357 | 100.0 | 46 | 12.9 | 1.00 | |||
| ≥ 70,803 | 0 | 0.0 | |||||||
| PAI1 (pg/mL) | < 643.76 | 343 | 95.5 | 33 | 9.6 | 1.00 | |||
| ≥ 643.76 | 16 | 4.5 | 12 | 75.0 | 28.18 | 8.60 | 92.37 | ||
| ApoE (pg/mL) | < 9,433.5 | 339 | 95.0 | 31 | 9.1 | 1.00 | |||
| ≥ 9,433.5 | 18 | 5.0 | 15 | 83.3 | 49.68 | 13.63 | 181.09 | ||
| A1AT (pg/mL) | < 337,795 | 343 | 96.6 | 37 | 10.8 | 1.00 | |||
| ≥ 337,795 | 12 | 3.4 | 9 | 75.0 | 24.81 | 6.43 | 95.75 | ||
| ANG (pg/mL) | < 1,951.8 | 339 | 95.2 | 34 | 10.0 | 1.00 | |||
| ≥ 1,951.8 | 17 | 4.8 | 11 | 64.7 | 16.44 | 5.72 | 47.27 | ||
| MM10 (pg/mL) | < 40.975 | 347 | 97.2 | 38 | 11.0 | 1.00 | |||
| ≥ 40.975 | 10 | 2.8 | 7 | 70.0 | 18.97 | 4.71 | 76.46 |
Bold values indicate significant
Summary of diagnostic performance of Oncuria™ in high-grade/low-grade and high stage/low stage bladder cancer
| Number of bladder cancer cases predicted by biomarker assay | AUC | Sensitivity (%) | Specificity (%) | NPV (%) | PPV (%) | |
|---|---|---|---|---|---|---|
| Overall | 42/45a | 0.95 | 0.93 | 0.93 | 0.99 | 0.65 |
| Low-grade tumors | 8/9 | 0.94 | 0.89 | 0.93 | 1.00 | 0.26 |
| High-grade tumors | 34/36 | 0.95 | 0.94 | 0.93 | 1.00 | 0.60 |
| NMIBC | 25/27 | 0.93 | 0.93 | 0.93 | 0.99 | 0.52 |
| MIBC | 15/16 | 0.97 | 0.94 | 0.93 | 1.00 | 0.39 |
NMIBC non-muscle invasive bladder cancer, MIBC muscle invasive bladder cancer, AUC Area under ROC curve;
a1 missing an analyte and thus excluded