| Literature DB >> 33807341 |
Jiajia He1, Dianyong Tang2, Changwei Hu1, Zhishan Su1.
Abstract
Density functional theory (DFT) calculations were performed to investigate the mechanism and the enantioselectivity of theEntities:
Keywords: DFT calculation; aza-Henry reaction; catalyst design; guanidine–amide; ketimine; mechanistic investigation
Year: 2021 PMID: 33807341 PMCID: PMC8037019 DOI: 10.3390/molecules26071965
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Asymmetric aza-Henry reaction of isatin-derived N-protected ketimines (R1) and nitromethane (R2) catalyzed by guanidine–amide catalysts.
Scheme 2Mechanism of aza-Henry reaction between ketimine (R1a and R1b) and nitromethane (R2), catalyzed by guanidine–amide catalyst (G1).
Figure 1Optimized structures of G1-COM, G1-TS1 and G1-IM1 and their relative Gibbs free energies (in kcal·mol−1). The distances are in Å. Laplacian (∇2ρ) and electronic density (ρ) values of the selected bond critical points (BCP) in G1-COM were obtained by atom in molecule (AIM) analysis.
Scheme 3Four possible reaction pathways along re- or si-face attacks to obtain the R- or S-configuration products, respectively.
Figure 2(a) The natural atom charges at H atoms in guanidine cation species, obtained by natural bond orbital (NBO) analysis. (b) Electrostatic potential (ESP) mapped Van der Waals surface of protonated G1. The redder the color, the more positive the ESP. The purple and red spheres represented the local minima and maxima points, respectively.
Figure 3Energy profiles for aza-Henry reaction between N-Boc ketimine (R1a) and nitromethane (R2) catalyzed by guanidine (G1) along re- and si-face pathways in models I and II, respectively.
Figure 4Optimized geometries of four transition states along re- or si-face attack pathways. The relative Gibbs free energies are given in kcal·mol−1.
Figure 5(a) ASM analysis of aza-Henry reaction between N-Boc ketimine (R1a) and nitromethane (R2) along the reaction coordinate projected onto the C13⋯C15 distance for re- and si-pathways. (b) Evolution of ∆Eint of two energy components along the reaction coordinate.
Figure 6Optimized structures and the relative Gibbs free energy (kcal·mol−1) of transition states G1-1b-I-re-TS2 and G1-1b-I-si-TS2 in the C–C bond formation step in the aza-Henry reaction between ketimine (R1b) and nitromethane (R2) catalyzed by guanidine G1.
Figure 7Optimized structures of transition states and the relative Gibbs free energies (kcal·mol−1) in the aza-Henry reaction between N-Boc ketimine (R1a) and nitromethane (R2) catalyzed by guanidine G2.
Turnover frequency (TOF) of the catalytic cycle of aza-Henry reactions of isatin-derived ketimine (R1a) and nitromethane (R2) along four pathways. TDI and TDTS are the TOF-determining intermediates and TOF-determining transition states, respectively.
| Path | TDI | TDTS | TOF (s−1) | Product |
|---|---|---|---|---|
| I- | G1-1a-I- | G1-1a-I- | 2.06 × 1010 | P- |
| I- | G1-1a-I- | G1-1a-I- | 2.98 × 108 | P- |
| II- | G1-1a-II- | G1-1a-II- | 1.24 × 1010 | P- |
| II- | G1-1a-II- | G1-1a-II- | 1.03 × 1010 | P- |
Figure 8Origin of enantioselectivity in the aza-Henry reaction.
Scheme 4New catalysts G3 and G4.
Figure 9Optimized geometries of catalysts G3 and G4. The distances are in Å. The H atoms in phenyl and cyclohexyl groups are omitted for clarity.
Figure 10Optimized structures and the relative Gibbs free energies (in kcal·mol−1) of two competing transition states (G3-re-TS2 and G3-si-TS2) in the C–C bonding formation step of the aza-Henry reaction catalyzed by G3. The distances are in Å.
Figure 11Optimized structures and the relative Gibbs free energies (in kcal·mol−1) of two competing transition states (G4-re-TS2 and G4-si-TS2) in the C–C bonding formation step of the aza-Henry reaction catalyzed by G4. The distances are in Å.
Figure 12Energy profiles for aza-Henry reaction between N-Boc ketimine (R1a) and nitromethane (R2) catalyzed by G4 along re-face and si-face pathways, respectively.
Scheme 5A possible synthesis route of catalyst G4.