Jun Wang1, Baswanth Oruganti2, Bo Durbeej3. 1. Institut de Química Computacional i Catàlisi, Facultat de Ciències, Universitat de Girona, ES-17003 Girona, Spain. 2. Department of Chemistry and Biomedical Sciences, Faculty of Health and Life Sciences, Linnaeus University, SE-45041 Kalmar, Sweden. 3. Division of Theoretical Chemistry, IFM, Linköping University, SE-58183 Linköping, Sweden.
Abstract
Synthetic molecular motors driven by E/Z photoisomerization reactions are able to produce unidirectional rotary motion because of a structural asymmetry that makes one direction of rotation more probable than the other. In most such motors, this asymmetry is realized through the incorporation of a chemically asymmetric carbon atom. Here, we present molecular dynamics simulations based on multiconfigurational quantum chemistry to investigate whether the merits of this approach can be equaled by an alternative approach that instead exploits isotopic chirality. By first considering an N-methylpyrrolidine-cyclopentadiene motor design, it is shown that isotopically chiral variants of this design undergo faster photoisomerizations than a chemically chiral counterpart, while maintaining rotary photoisomerization quantum yields of similarly high magnitude. However, by subsequently considering a pyrrolinium-cyclopentene design, it is also found that the introduction of isotopic chirality does not provide any control of the directionality of the photoinduced rotations within this framework. Taken together, the results highlight both the potential usefulness of isotopic rather than chemical chirality for the design of light-driven molecular motors, and the need for further studies to establish the exact structural circumstances under which this asymmetry is best exploited.
Synthetic molecular motors driven by E/Z photoisomerization reactions are able to produce unidirectional rotary motion because of a structural asymmetry that makes one direction of rotation more probable than the other. In most such motors, this asymmetry is realized through the incorporation of a chemically asymmetric carbon atom. Here, we present molecular dynamics simulations based on multiconfigurational quantum chemistry to investigate whether the merits of this approach can be equaled by an alternative approach that instead exploits isotopic chirality. By first considering an N-methylpyrrolidine-cyclopentadiene motor design, it is shown that isotopically chiral variants of this design undergo faster photoisomerizations than a chemically chiral counterpart, while maintaining rotary photoisomerization quantum yields of similarly high magnitude. However, by subsequently considering a pyrrolinium-cyclopentene design, it is also found that the introduction of isotopic chirality does not provide any control of the directionality of the photoinduced rotations within this framework. Taken together, the results highlight both the potential usefulness of isotopic rather than chemical chirality for the design of light-driven molecular motors, and the need for further studies to establish the exact structural circumstances under which this asymmetry is best exploited.
Molecular motors are
molecules that use energy from an external
source to produce mechanical motion and furthermore have the ability
to control the direction of the resulting motion.[1−3] Among the different
types of synthetic molecular motors available today, those that achieve
360° unidirectional rotary motion through UV- or visible-light-powered
photoisomerization reactions around a double bond are commonly referred
to as light-driven rotary molecular motors, with examples including
overcrowded-alkene,[4,5] hemithioindigo,[6,7] dibenzofulvene,[8] and N-alkyl-imine[9,10] motors. Typically, the required control of the photoinduced rotation
of such systems is attained by the introduction of chirality into
the motors and the asymmetry between clockwise (CW) and counterclockwise
(CCW) photoisomerization directions that chirality imparts on their
excited-state dynamics. While most of these motors contain a chiral
center, it is not absolutely essential that they do. Indeed, overcrowded
alkenes and dibenzofulvenes have proven to be able to sustain unidirectional
rotary motion through the presence of a pseudoasymmetric carbon atom[11] or an axially chiral trityl moiety,[8] respectively, in place of a chiral center. Furthermore,
it has been demonstrated that the CW or CCW rotary direction of motors
featuring a ring-puckered cyclohexenylidene motif can be controlled
by the intrinsic asymmetry afforded by this motif.[12] Complementing these structure-based approaches to introduce
the desirable asymmetry, it is also possible to steer the rotary motion
of light-driven molecular motors by means of the chirality of the
radiation supplied to them.[13]Recently,
an entirely new approach based on isotopic chirality
(chirality resulting from isotopic substitution of an otherwise achiral
species[14,15]) to induce unidirectional rotary motion
in molecular motors operated through double-bond photoisomerizations
was put forth and tested computationally by our group using quantum
chemical methods and nonadiabatic molecular dynamics (NAMD) simulations.[16] Although the study of isotopic chirality has
a long history, beginning in 1949 with the first measurement of optical
activity of an isotopically chiral molecule (α-deuteroethylbenzene)[17] and involving both the manifestation of this
phenomenon in many different contexts (such as in asymmetric autocatalysis,[18−20] deracemization processes,[21] and supramolecular
aggregation[22,23]) and its investigation by theoretical
methods,[15,24,25] the consequences
of isotopic chirality are generally less readily detectable than those
of chemical chirality. Hence, it is noteworthy that our computational
study predicted that two isotopically chiral compounds (2 and 3 in Scheme ), derived by replacing the methyl substituent at the C5 asymmetric
carbon atom of a chemically chiral molecular motor (4 in Scheme ) by either 2H (in 2) or 3H (in 3),
sustain unidirectional rotary motion almost just as well as the parent
motor through their E → Z and Z → E photoisomerizations
around the central olefinic bond.[16] This
finding shows that isotopic chirality has a possible role to play
in the realization of rotary motion by molecular motors. In this connection,
recent progress toward asymmetric synthesis of isotopically chiral
hydrocarbons is very timely.[26]
Scheme 1
Chemical
Structures of Compounds Studied in This Work Shown in Their E Isomeric Forms and Definitions of Key Geometric Parameters
Against this background, it is worthwhile to
further investigate
the possibility to exploit isotopic chirality for the design of molecular
motors, especially since this idea is untested beyond the above-described
results.[16] In the present work, we report
NAMD simulations that shed new light on this possibility from three
different perspectives.First, we explore a potential advantage
that the isotopically chiral
compounds 2 and 3 hold over the chemically
chiral species 4 in that their rotary motion might be
faster, because the moment of inertia with respect to the axis of
the central olefinic bond is likely to be decreased when the C5 methyl
group of 4 is replaced by ∼7.5-fold (2H in 2) and ∼5-fold (3H in 3) lighter substituents. In order to make a statistically rigorous
assessment of this hypothesis, many more NAMD trajectories need to
be calculated than what our initial study could afford. Despite the
steep computational cost of such an endeavor, mandated both by statistical
considerations and the need to use expensive multiconfigurational
methods to ensure that the photochemical modeling is reliable, this
work aims to test this hypothesis. Second, by performing these NAMD
simulations, we are also able to assess how the photoisomerization
quantum yields (QYs) of 2 and 3 compare
to those of 4, which have been shown to be high.[27] This is particularly important because attaining
high QYs is one of the main drivers of current research on light-driven
molecular motors,[28−31] stemming from the fact that the most developed class of such motors
(the paradigm-shifting overcrowded alkenes[30]) performs rather poorly in this regard[32−34] and, consequently,
convert only a small portion of the absorbed radiation into rotary
motion. Third, by running NAMD simulations of isotopically chiral
counterparts of not only 4 but also of another type of
chemically chiral motors with entirely different excited-state properties
(7 in Scheme ), we begin to investigate the extent to which the concept
of isotopic chirality is broadly applicable in the field of molecular
motors.
Results and Discussion
Before presenting the results
from the NAMD simulations, it is
appropriate to first briefly describe the key features of the chemically
chiral motor designs 4 and 7 shown in Scheme , from which the
isotopically chiral compounds studied in this work are derived. In 4, the E/Z-isomerizable
olefinic bond connects a cyclopentadiene motif to a chiral, electron-donating N-methylpyrrolidine motif, whereas in 7, it
connects a chiral cyclopentene to a protonated, nitrogenSchiff-base.
These designs, which have their origin in computational work[27,29,35] but for which synthetic routes
are available,[36−38] have been put forth as possible alternatives to overcrowded-alkene
motors based on predictions that their photoisomerization QYs are
higher.[27,39] This is because the cleavage of the isomerizing
π-bond is facilitated either by the concurrent transformation
of the nonaromatic cyclopentadiene into an aromatic cyclopentadienyl
anion in the bright second excited singlet state (S2) of 4(27,40,41) or by the
electron-withdrawing capacity of the cationic nitrogen center in the
bright first excited singlet state (S1) of 7.[29,42]As for the ability of 4 and 7 to produce
unidirectional rotary motion, this stems in part from the asymmetry
between CW and CCW photoisomerization directions introduced by the
presence of a chiral center in both compounds (C5 in 4 and C5′ in 7). Furthermore, the steric hindrance
toward photoisomerization posed by the methyl substituent at the respective
chiral center is different for the two directions, which is also a
characteristic of overcrowded-alkene motors.[30] In this light, investigating how the motor performance is influenced
by the reduction of this steric hindrance through the replacement
of the methyl by 2H or 3H is of particular interest.Deriving from 4, achiral compound 1 and
isotopically chiral compounds 2 and 3 harbor 1H, 2H or 3H in place of the C5 methyl,
respectively. Similarly, deriving from 7, isotopically
chiral compounds 5 and 6 contain 2H or 3H in place of the C5′ methyl, respectively.
Importantly, all of these compounds are small enough to be amenable
to the NAMD-based modeling required to meet the goals of this work.
Indeed, owing to their description of the simultaneous dynamics of
electronic (treated quantum mechanically) and nuclear (treated classically)
degrees of freedom, NAMD simulations are able to probe the effects
of isotopic substitution on chemical reactions in a way that is not
feasible by regular quantum chemical calculations performed within
the adiabatic Born–Oppenheimer approximation (in this approximation,
nuclear masses do not enter the electronic Hamiltonian). The merits
of NAMD simulations in this regard have been amply demonstrated in
studies of excited-state proton transfer reactions by Thiel and co-workers.[43]
NAMD Simulations of 1–4
Since the E → Z and Z → E photoisomerizations
of 1–4 are triggered
through population of the S2 state (by absorption of UV
photons),[16] the corresponding NAMD simulations
were started in this state, from the respective vertically excited
Franck–Condon (FC) point. The simulations were run for maximally
800 fs and, to obtain good statistical coverage, with 100 different
initial nuclear configurations and velocities for each of the eight
reactions. In order to quantify the results, a few designations and
definitions were made as follows.First, a trajectory was considered
successful if it both reaches the ground state (S0) through
successive S2/S1 and S1/S0 nonadiabatic events and completes a full 180° rotation around
the central olefinic bond within the maximum simulation time. Second,
the photoisomerization time (PIT) and the total excited-state lifetime
(τ) were defined as the time needed for one such rotation and
the time needed for a trajectory to decay to the S0 state,
respectively. Similarly, the S2 lifetime (τ2) was defined as the time needed for a trajectory to decay to the
S1 state. Accordingly, it follows that the S1 lifetime (τ1) was obtained as τ1 = τ – τ2. Given that not all trajectories
underwent decay to S0 within 800 fs (see Table S1 of the Supporting Information), average τ, τ1, and τ2 values were calculated exclusively
among those trajectories that really did. Third, the total and rotary
QYs of the photoisomerization of a given species were calculated asandrespectively.
Here, N is
the total number of trajectories run (i.e., 100), and N(ω–) and N(ω+) are the number of successful trajectories rotating in the direction
of decreasing and increasing values of the ω dihedral angle
(defined in Scheme ), respectively. With this way of calculating the QYs, the key predictor
of whether 1–4 are efficient in producing 360°
unidirectional rotary motion through consecutive E → Z and Z → E photoisomerizations is that the rotary QYs (rather than the total QYs) are high for both
reactions. The main results from all 800 NAMD trajectories are summarized
in Figure , with complementary
data given in Table S1.
Figure 1
Distributions of τ
(full blue circles) and PIT (full red
circles) values from the NAMD simulations of the E and Z isomers of 1–4, and the
corresponding changes in the ω dihedral angle relative to the
initial nuclear configuration (full black circles). Also shown are
the average τ, τ1, τ2, and
PIT values (⟨τ⟩, ⟨τ1⟩,
⟨τ2⟩ and ⟨PIT⟩), the
percentages of trajectories that rotate in the direction of decreasing
ω values and decay to the S0 state (in blue font),
and the rotary QYs (in red font). The data underlying these results
are summarized in Table S1.
Distributions of τ
(full blue circles) and PIT (full red
circles) values from the NAMD simulations of the E and Z isomers of 1–4, and the
corresponding changes in the ω dihedral angle relative to the
initial nuclear configuration (full black circles). Also shown are
the average τ, τ1, τ2, and
PIT values (⟨τ⟩, ⟨τ1⟩,
⟨τ2⟩ and ⟨PIT⟩), the
percentages of trajectories that rotate in the direction of decreasing
ω values and decay to the S0 state (in blue font),
and the rotary QYs (in red font). The data underlying these results
are summarized in Table S1.Starting with the chemically chiral compound 4, which
serves as the benchmark for the other compounds, it is notable from Figure that the rotary
QYs are high for both isomers. Specifically, equaling 69 (E) and 68% (Z), they reveal a clear propensity
for the photoisomerizations to occur in the direction of decreasing
ω values (cf. eq ). In fact, Table S1 shows that out of
the 71 (E) and 74 (Z) trajectories
that were successful for 4, only 1 (E) and 3 (Z) resulted in a rotation in the opposite
direction. Regarding the 29 (E) and 26 (Z) unsuccessful trajectories, these correspond to situations where
the decay to the S0 state is followed by regeneration of
the parent species from which the reaction started or where the photoexcited
system remains in the S2 state without isomerizing. In
order to clarify which of these bottlenecks is the most significant
one, it is observed that 91 (E) and 90% (Z) of the trajectories reach the S0 state after
having undergone appreciable torsional motion in the direction of
decreasing ω values (indicated by blue circles in Figure ), typically decaying at ω
values around 90 (E) or −90° (Z). Hence, by comparing these percentages with the rotary
QYs of 69 (E) and 68% (Z), it is
clear that regeneration of the parent species is the major bottleneck.Besides its high rotary QYs, which substantially exceed those that
are typical for overcrowded-alkene motors,[32−34] another feature
that makes 4 an attractive motor design is that its average
τ and PIT values are small, amounting to no more than 221 and
352 fs for the E isomer and 208 and 301 fs for the Z isomer. For comparison, overcrowded-alkene motors usually
have excited-state lifetimes of at least 1 ps.[34] Thus, 4 appears capable of producing rather
fast rotary motion. It can also be deduced from Figure that most of the excited-state evolution
of 4 occurs in the S2 state because the average
τ1 values are much smaller (17 and 16 fs) than the
average τ2 values (204 and 192 fs).Continuing
with the results for 1–3, it is first
noted that the rotary QYs of 29 (E) and 46% (Z) that the achiral compound 1 achieves are
much lower than those of 69 (E) and
68% (Z) attained by 4. The importance
of chemical chirality for 4 to function as an efficient
motor is thereby evident. However, moving to 2 and 3, it is striking that this gap in the rotary QYs is significantly
narrowed (in 2) or even almost eliminated (in 3) by the isotopic chirality of these species. More specifically,
the rotary QYs are 49 (E) and 61% (Z) for 2 and 58 (E) and 67% (Z) for 3. Emerging from a very large set of
calculated NAMD trajectories, these results suggest that at least
within certain molecular frameworks, the potency of isotopic chirality
in facilitating high-QY rotary motion in light-driven molecular motors
is comparable to that of chemical chirality, despite that isotopic
chirality affords less steric hindrance to control the directionality
of the photoisomerizations. As for the rotary QYs being somewhat higher
for 3 than for 2, this is consistent with
the expectation, discussed by Soai and co-workers,[19] that a larger isotope mass ratio (3H/1H in 3 vs 2H/1H in 2) should give a larger isotope effect also in the context of chirality.Another observation for 2 and 3 in Figure concerns the differences
between the percentages of trajectories that decay to the S0 state (63–72% for 2 and 68–76% for 3) and their rotary QYs (49–61% for 2 and
58–67% for 3), which show that the decay process
is the major bottleneck for the photoisomerizations of these compounds.
This is contrary to the aforementioned situation for 4, for which regeneration of the parent species is the main bottleneck.
Through previous minimum energy path (MEP) calculations starting from
the S2 FC points of the E and Z isomers of 2 and 3, it has been
found that the decay process is likely to be mediated by S2/S1 and S1/S0 conical intersection
seams, as evidenced by the localization of structures with very small
S2/S1 (∼1–2 kcal mol–1) and S1/S0 (∼5 kcal mol–1) energy gaps along the MEPs of both isomers.[16] These structures, which are shown in Figure S2 of the Supporting Information, also provide a tentative
explanation for the observation that the average τ1 values for 2 and 3 are much smaller (15–22
fs) than their average τ2 values (135–140
fs). Specifically, for both isomers, it was found that the small-energy-gap
S1/S0 MEP structure lies very close to the small-energy-gap
S2/S1 MEP structure along the ω reaction
coordinate, both being substantially rotated relative to the S2 FC point (see Figure S2).[16] Hence, the photoinduced motion takes place predominantly
in the S2 state, and there is no need for any appreciable
further rotation in the S1 state to subsequently reach
the S1/S0 decay channel.From Figure , it
can also be inferred that the use of isotopic chirality to control
the directionality of the E/Z photoisomerizations
of 2 and 3 holds a potential advantage over
the use of chemical chirality by allowing for faster rotary motion.
Indeed, although it has already been seen that 4 exhibits
average τ and PIT values that are small (208–221 and
301–352 fs), those of 2 and 3 (152–160
and 251–257 fs) are even smaller by ∼15–30% (as
for the average τ values, this difference is primarily contained
in the average τ2 values, which amount to 192–204
fs for 4 and 135–140 fs for 2 and 3). This is likely a consequence of the decrease in moment
of inertia with respect to the axis of rotation that comes from replacing
the C5 methyl group of 4 with lighter 2H and 3H substituents in 2 and 3. In order
to further assess the difference in τ and PIT values between 2/3 and 4, it is of interest to
investigate how the ω dihedral angle and the length of the central
olefinic bond evolve along individual NAMD trajectories for the E and Z isomers of 1–4. This is done in Figure , for “typical” trajectories whose PIT values
are similar to the average PIT values in Figure . As can be seen, for each reaction, the
very initial excited-state dynamics is dominated by substantial stretching
of the central bond, which changes character from C=C (bond length
smaller than 1.4 Å) to C–C (bond length larger than 1.5
Å) to facilitate the subsequent rotation. However, while there
is a plateau-like lag for the rotation to begin in the E and Z isomers of 4, in the lighter
species 2 and 3, there is no such delay,
and the rotation can be completed in shorter time.
Figure 2
Changes in the ω
dihedral angle and the length of the central
olefinic bond (I) along typical NAMD trajectories for the E and Z isomers of 1–4. τ and PIT values are indicated with vertical lines.
Changes in the ω
dihedral angle and the length of the central
olefinic bond (I) along typical NAMD trajectories for the E and Z isomers of 1–4. τ and PIT values are indicated with vertical lines.
NAMD Simulations of 5–7
The NAMD-based
modeling of 5–7 was performed similarly to that
of 1–4, starting from the respective FC point
in the S1 state in which the E → Z and Z → E photoisomerizations
of small, protonated Schiff-base compounds are known to occur following
absorption of UV photons.[44] However, since
the aim of these simulations to investigate qualitatively whether isotopic chirality can induce unidirectional rotary motion
also in a Schiff-base motor framework is very different from that
of the simulations of 1–4 (which was to provide quantitatively accurate estimates of rotary QYs, τ
and PIT values), a fewer number of different initial nuclear configurations
and velocities were considered for each of the six photoisomerizations
(20 instead of 100). This, we believe, is a sound and economical strategy
because assessing whether the resulting trajectories have a tendency
to rotate in one and the same direction requires less statistical
coverage than calculating rotary QYs, τ and PIT values. The
main results from all 120 trajectories are summarized in Figure , with complementary
data given in Table S2 of the Supporting Information.
Figure 3
Distributions of PIT values for successful NAMD trajectories for
the E and Z isomers of 5–7 rotating in the direction of either increasing (CW) or decreasing
(CCW) ω dihedral angle, the corresponding average τ and
PIT values (⟨τ⟩ and ⟨PIT⟩), and
the corresponding changes in the ω value relative to the initial
nuclear configuration. Also shown are the number of successful trajectories
in each category. The data underlying these results are summarized
in Table S2.
Distributions of PIT values for successful NAMD trajectories for
the E and Z isomers of 5–7 rotating in the direction of either increasing (CW) or decreasing
(CCW) ω dihedral angle, the corresponding average τ and
PIT values (⟨τ⟩ and ⟨PIT⟩), and
the corresponding changes in the ω value relative to the initial
nuclear configuration. Also shown are the number of successful trajectories
in each category. The data underlying these results are summarized
in Table S2.Starting with the chemically chiral compound 7, Figure shows that the ratios
of successful photoisomerization trajectories are high for both isomers,
amounting to 15/20 (E) and 19/20 (Z). Furthermore, all of these rotations are perfectly unidirectional,
occurring exclusively in the direction of increasing ω values,
which is here defined as a CW rotation. Combined with the observation
that the average τ and PIT values are small, equaling 205 and
276 fs for the E isomer and 189 and 265 fs for the Z isomer, 7 appears to be another motor design
alongside 4 capable of achieving both high rotary QYs
and fast rotary motion. Continuing with the results for the isotopically
chiral compounds 5 and 6, however, the situation
is different. In fact, even though the ratios of successful trajectories
remain high (16/20 and 13/20 for the E and Z isomers of 5, and 12/20 and 16/20 for the E and Z isomers of 6), the
frequencies with which the rotations occur in the CW direction are not consistently larger than the frequencies with which
they occur in the opposite CCW direction, toward decreasing ω
values. Contrarily, the two directions appear equally probable. This
suggests that 5 and 6 are less able than
the chemically chiral compound 7 to utilize consecutive E → Z and Z → E photoisomerizations to produce a full 360° rotation
around the central olefinic bond. Furthermore, this finding indicates
that the overall ability of isotopic chirality to control the directionality
of E/Z photoisomerizations depends
on the molecular framework. Indeed, while we have seen that this ability
is pronounced within the N-methylpyrrolidine–cyclopentadiene
framework of 1–4, it seems poor within the pyrrolinium–cyclopentene
framework of 5–7.In view of these results,
identifying general structural circumstances
under which isotopic chirality can contribute to the design of light-driven
rotary molecular motors is a natural goal for future research in this
field. From the viewpoint of quantum chemical modeling, such endeavors
are likely to require nonstandard approaches that go beyond the Born–Oppenheimer
approximation and allow for the difference in mass between the relevant
isotopes to influence calculated molecular geometries and reaction
paths.[45] Progress along those lines will
also stimulate computational studies of the role of isotopic chirality
in various other experimentally documented contexts, such as asymmetric
autocatalysis[18−20] and supramolecular aggregation.[22,23]
Conclusions
In summary, we have performed extensive
NAMD simulations to investigate
potential merits of using isotopic chirality instead of chemical chirality
to induce unidirectional rotary motion in molecular motors operated
by E/Z photoisomerization reactions
around an olefinic bond. To this end, we have studied two different
types of motors that on the one hand are sufficiently small to enable
NAMD simulations with a state-of-the-art electronic-structure method,
and, on the other, photoisomerize at a short enough time scale to
make extensive simulations tractable. By first considering an N-methylpyrrolidine–cyclopentadiene motor, it is
found that isotopically chiral variants of this motor show rotary
QTs for their photoisomerizations that are quite comparable to the
ones of ∼70% achieved by the parent, chemically chiral species.
Furthermore, it is noted that the use of isotopic chirality to control
the directionality of the photoisomerizations allows for faster rotary
motion, which is a clear advantage. However, by then considering a
pyrrolinium–cyclopentene motor, no preference for one direction
of isomerization (CW or CCW) over the other is observed upon introduction
of isotopic chirality, which suggests that only certain molecular
frameworks are able to exploit this asymmetry for the production of
unidirectional rotary motion. In future research, we will first attempt
to identify key characteristics of such frameworks and, if successful,
subsequently investigate whether these characteristics are present
in or can be introduced into well-established overcrowded-alkene[4,5,30] or hemithioindigo motors.[6,7] For example, it will be of interest to assess whether isotopic chirality
can help reduce the >1 ps excited-state lifetimes of overcrowded-alkene
motors.[34]
Computational
Methods
The NAMD simulations were carried out with Tully’s
fewest
switches algorithm[46] and the complete active
space self-consistent field (CASSCF) method[47] in combination with the double-zeta 6-31G(d) basis set, using the
OpenMolcas suite of programs.[48] Electronic
wave functions were calculated through a state-average CASSCF procedure
with equal weights for the states involved in the photoisomerizations—S0, S1, and S2 for 1–4, and S0 and S1 for 5–7. As for active spaces, the full π-system of the cyclopentadiene
motif and the central olefinic bond, as well as the nitrogen lone
pair of the N-methylpyrrolidine motif, was included
in the CASSCF modeling of 1–4 (i.e., CAS(8,7)),
and the full π-system of the pyrrolinium–cyclopentene
skeleton was included in the CASSCF modeling of 5–7 (i.e., CAS(6,6)). The simulations were started in the S2/S1 state of 1–4/5–7 and were run for maximally 800 fs with 100/20 different initial
nuclear configurations and velocities generated by performing S0 Born–Oppenheimer MD simulations for 3 ps at the CASSCF/6-31G(d)
level of theory. An integration time step of 0.5 fs was used for the
classical propagation of the nuclear positions by means of the velocity
Verlet algorithm.[49]As outlined in
detail elsewhere,[46,50] the quantum
mechanical description of electrons in Tully’s method makes
use of the possibility to express the total wave function Ψ(r,t;R) for a molecular system
as a linear combination of adiabatic electronic states {ϕ(r;R)} with time-dependent
complex amplitudes {a(t)}where r denotes electronic coordinates
and R = R(t) is the trajectory
followed by the nuclei. In the present case, this expansion includes
the S0, S1, and S2 states for 1–4, and the S0 and S1 states
for 5–7. The requirement that Ψ(r,t;R) satisfies the time-dependent
Schrödinger equation then leads to a set of coupled differential
equations that can be numerically integrated (herein with a time step
of 0.0025 fs) to obtain the amplitudesHere, E(R) is the potential energy of the adiabatic electronic
state k and {C} are the non-adiabatic coupling matrix elements between states k and j, defined aswhere the integration is over the electronic
coordinates r. Throughout the NAMD simulations, the trajectories
are free to populate any state included in the expansion 3, with the respective population determined by the value of
|a(t)|2.
Authors: Salma Kassem; Thomas van Leeuwen; Anouk S Lubbe; Miriam R Wilson; Ben L Feringa; David A Leigh Journal: Chem Soc Rev Date: 2017-05-09 Impact factor: 54.564
Authors: Lukas Pfeifer; Maximilian Scherübl; Maximilian Fellert; Wojciech Danowski; Jinling Cheng; Jasper Pol; Ben L Feringa Journal: Chem Sci Date: 2019-08-09 Impact factor: 9.825