| Literature DB >> 33778174 |
Kashuf Fatima1, Archya Dasgupta1,2,3, Daniel DiCenzo1, Christopher Kolios1, Karina Quiaoit1, Murtuza Saifuddin1, Michael Sandhu1, Divya Bhardwaj1, Irene Karam2,3, Ian Poon2,3, Zain Husain2,3, Lakshmanan Sannachi1, Gregory J Czarnota1,2,3,4.
Abstract
PURPOSE: This study investigated the use of quantitative ultrasound (QUS) obtained during radical radiotherapy (RT) as a radiomics biomarker for predicting recurrence in patients with node-positive head-neck squamous cell carcinoma (HNSCC).Entities:
Keywords: AAC, Average acoustic concentration; ACE, Attenuation co-efficient estimate; ASD, Average scatterer diameter; AUC, Area under the curve; Acc, Accuracy; CON, Contrast; COR, Correlation; CR, Complete responders; CT, Computed tomography; Delta-radiomics; EBV, Epstein-Barr virus; ENE, Energy; FDG-PET, 18F-fluorodeoxyglucose positron emission tomography; FLD, Fisher’s linear discriminant; FN, False negative; FP, False positive; GLCM, Grey level co-occurrence matrix; HN, Head and neck; HNSCC, Head and neck squamous cell carcinoma; HOM, Homogeneity; HPV, Human papillomavirus; Head and neck malignancy; IGRT, Image-guided radiation therapy; IMRT, Intensity-modulated radiation therapy; MBF, Mid-band fit; MRI, Magnetic resonance imaging; Machine learning; NR, Non-recurrence; PET, Positron emission tomography; PR, Partial responders; QUS, Quantitative ultrasound; Quantitative ultrasound; R, Recurrence; RF, Radiofrequency; RFS, Recurrence-free survival; ROI, Region of interest; RT, Radiotherapy; Radiomics; Radiotherapy squamous cell carcinoma; Recurrence; SAS, Spacing among scatterers; SI, Spectral intercept; SP, Specificity; SS, Spectral slope; SVM, Support vector machine; Sn, Sensitivity; TN, True negative; TP, True positive; US, Ultrasound; kNN, k nearest neighbors
Year: 2021 PMID: 33778174 PMCID: PMC7985224 DOI: 10.1016/j.ctro.2021.03.002
Source DB: PubMed Journal: Clin Transl Radiat Oncol ISSN: 2405-6308
Patient, disease, and treatment-related characteristics for all patients.
| Clinical Characteristics | n = 51 (All Subjects) | ||||
|---|---|---|---|---|---|
| Recurrence (n=17) | Non-Recurrence (n = 34) | ||||
| Patient Characteristics | n | % | n | % | |
| Age | Median | 59 years | 61 years | ||
| Range | 40–70 years | 39–80 years | |||
| Gender | Female | 0 | 0% | 3 | 9% |
| Male | 17 | 100% | 31 | 91% | |
| Smoking Status | Smoker | 12 | 71% | 23 | 68% |
| Non-Smoker | 5 | 29% | 11 | 32% | |
| Disease Characteristics | n | % | n | % | |
| T-stage | T0a | 4 | 24% | 1 | 3% |
| T1 | 0 | 0% | 14 | 41% | |
| T2 | 4 | 24% | 14 | 41% | |
| T3 | 3 | 18% | 2 | 6% | |
| T4 | 6 | 34% | 3 | 9% | |
| N-stage | N1 | 1 | 6% | 21 | 62% |
| N2 | 8 | 47% | 12 | 35% | |
| N3 | 8 | 47% | 1 | 3% | |
| Tumor Grade | I | 1 | 6% | 0 | 0% |
| II | 1 | 6% | 4 | 12% | |
| III | 6 | 35% | 12 | 35% | |
| Unclassified | 9 | 53% | 18 | 53% | |
| Site | Oropharynx | 10 | 59% | 29 | 85% |
| Hypopharynx | 1 | 6% | 1 | 3% | |
| Larynx | 2 | 12% | 3 | 9% | |
| CUP | 4 | 24% | 1 | 3% | |
| HPV Status | p16(+) | 8 | 47% | 28 | 82% |
| p16(−) | 2 | 12% | 0 | 0% | |
| Indeterminate/Unknown | 7 | 41% | 6 | 18% | |
| Treatment Characteristics | n | % | n | % | |
| Radiation + Chemotherapy (Concomitant) | Cisplatin | 10 | 59% | 25 | 74% |
| Cisplatin → Carboplatin | 1 | 6% | 2 | 6% | |
| Carboplatin | 1 | 6% | 2 | 6% | |
| Radiation + Targeted Therapy (Concomitant) | Cetuximab | 1 | 6% | 0 | 0% |
| Definitive Radiation Alone | Radiation Only | 4 | 24% | 5 | 15% |
HPV: Human Papilloma Virus; CUP: Carcinoma of unknown primary origin.
a T0 denotes carcinoma of unknown primary.
Fig. 1Representative ultrasound B-mode images (upper row) with six representative texture-based parameters that have been acquired from one patient in each group – with recurrence (A) and without any recurrence (B) at different times: pretreatment, week 1, and week 4. Change in parameter values with treatment can be noted as represented by changes in assigned color to the sub-regions of interest within the tumor. The color-coded maps illustrate the intratumoral heterogeneity. With ongoing RT, individual QUS parameter changes can be visually appreciated, as evident from the associated color changes, reflecting treatment-related changes. The two patients (recurrence versus non-recurrence) show different patterns of changes. The white scale bar in ultrasound images represents 5 mm. The color bars present the range for MBF parameter of −10 dB to 24 dB, SI parameter of −8 dB to 60 dB, AAC parameter of 20 dB/cm-MHz to 170 dB/cm-MHz, ASD parameter of 1 µm to 200 µm, SS parameter of −7.97 dB/MHz to 2.63 dB/MHz, and SAS parameter of 0.15 mm to 2.50 mm.
Fig. 2Scatter plot showing the individual value from each patient for five parameters having a significant difference in distribution between the two groups (recurrence and non-recurrence).
Classification performance of the three machine learning classifiers with the best-selected features by the algorithms obtained from different time points.
| Model | Classification Performance | Sensitivity % | Specificity % | Accuracy % | AUC | Best Feature(s) | ||
|---|---|---|---|---|---|---|---|---|
| FLD | Week 1 | 66 | 54 | 62 | 0.61 | ΔASD-ENE | ΔAAC-CON | |
| Week 4 | 64 | 67 | 65 | 0.68 | ΔMBF-ENE | ΔSS-CON | ΔSAS | |
| Week 1 | 85 | 65 | 78 | 0.75 | SS-ENE0 | ΔSI | SS-HOM0 | |
| Week 4 | 82 | 82 | 82 | 0.83 | SI0 | ΔSS-CON | ACE0 | |
| SVM | Week 1 | 79 | 80 | 80 | 0.75 | ACE0 | ΔAAC-CON | |
| Week 4 | 82 | 82 | 82 | 0.81 | ACE0 | ΔSI-HOM | ΔSS-HOM | |
AUC – Area under curve, FLD – Fisher's Linear Discriminate, kNN – k nearest-neighbors, SVM – Support vector machine.
*Δ Indicates the difference of values from baseline for each feature were included in the analysis.
MBF (dB): Mid-band fit, AAC (dB/cm3): Average Acoustic Concentration, ASD (µm): Average Scatterer Diameter, SS (dB/MHz): Spectral Scope, SAS (mm): Spacing Among Scatterer, ACE (dB/cm-MHz): Attenuation Coefficient Estimate, SI: Spectral Intercept, ENE: Energy, HOM: Homogeneity, COR: Correlation, CON: Contrast.
Fig. 3Receiver operating characteristic (ROC) plots showing the area under the curve (AUC) values obtained from the three classifiers, FLD, kNN, and SVM, at week 0 (pretreatment), week 1, and week 4. FLD: Fisher's Linear Discriminant; kNN: k Nearest Neighbours; SVM: Support Vector Machine.
Fig. 4Kaplan-Meier survival plots showing recurrence-free survival (A) and overall survival (B) based on predicted groups-recurrence (R) versus non-recurrence (NR)) using the support vector machine classifier at week 1.