Literature DB >> 33748985

Distortion-free, high-isotropic-resolution diffusion MRI with gSlider BUDA-EPI and multicoil dynamic B0 shimming.

Congyu Liao1,2, Berkin Bilgic1,2,3, Qiyuan Tian1,2, Jason P Stockmann1,2, Xiaozhi Cao1,2, Qiuyun Fan1,2, Siddharth Srinivasan Iyer1,4, Fuyixue Wang1,3, Chanon Ngamsombat1,2,5, Wei-Ching Lo6, Mary Kate Manhard1,2, Susie Y Huang1,2,3, Lawrence L Wald1,2,3, Kawin Setsompop1,2,3.   

Abstract

PURPOSE: We combine SNR-efficient acquisition and model-based reconstruction strategies with newly available hardware instrumentation to achieve distortion-free in vivo diffusion MRI of the brain at submillimeter-isotropic resolution with high fidelity and sensitivity on a clinical 3T scanner.
METHODS: We propose blip-up/down acquisition (BUDA) for multishot EPI using interleaved blip-up/blip-down phase encoding and incorporate B0 forward-modeling into structured low-rank reconstruction to enable distortion-free and navigator-free diffusion MRI. We further combine BUDA-EPI with an SNR-efficient simultaneous multislab acquisition (generalized slice-dithered enhanced resolution ["gSlider"]), to achieve high-isotropic-resolution diffusion MRI. To validate gSlider BUDA-EPI, whole-brain diffusion data at 860-μm and 780-μm data sets were acquired. Finally, to improve the conditioning and minimize noise penalty in BUDA reconstruction at very high resolutions where B0 inhomogeneity can have a detrimental effect, the level of B0 inhomogeneity was reduced by incorporating slab-by-slab dynamic shimming with a 32-channel AC/DC coil into the acquisition. Whole-brain 600-μm diffusion data were then acquired with this combined approach of gSlider BUDA-EPI with dynamic shimming.
RESULTS: The results of 860-μm and 780-μm datasets show high geometry fidelity with gSlider BUDA-EPI. With dynamic shimming, the BUDA reconstruction's noise penalty was further alleviated. This enables whole-brain 600-μm isotropic resolution diffusion imaging with high image quality.
CONCLUSIONS: The gSlider BUDA-EPI method enables high-quality, distortion-free diffusion imaging across the whole brain at submillimeter resolution, where the use of multicoil dynamic B0 shimming further improves reconstruction performance, which can be particularly useful at very high resolutions.
© 2021 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  diffusion-weighted imaging; distortion correction; gSlider; high-isotropic resolution; shim array

Mesh:

Year:  2021        PMID: 33748985      PMCID: PMC8121182          DOI: 10.1002/mrm.28748

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   3.737


  58 in total

1.  How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging.

Authors:  Jesper L R Andersson; Stefan Skare; John Ashburner
Journal:  Neuroimage       Date:  2003-10       Impact factor: 6.556

2.  Phase-matched virtual coil reconstruction for highly accelerated diffusion echo-planar imaging.

Authors:  Congyu Liao; Mary Kate Manhard; Berkin Bilgic; Qiyuan Tian; Qiuyun Fan; Sohyun Han; Fuyixue Wang; Daniel Joseph Park; Thomas Witzel; Jianhui Zhong; Haifeng Wang; Lawrence L Wald; Kawin Setsompop
Journal:  Neuroimage       Date:  2019-04-03       Impact factor: 6.556

3.  HIgh b-value and high Resolution Integrated Diffusion (HIBRID) imaging.

Authors:  Qiuyun Fan; Aapo Nummenmaa; Jonathan R Polimeni; Thomas Witzel; Susie Y Huang; Van J Wedeen; Bruce R Rosen; Lawrence L Wald
Journal:  Neuroimage       Date:  2017-02-07       Impact factor: 6.556

4.  Phase-updated regularized SENSE for navigator-free multishot diffusion imaging.

Authors:  Zhangxuan Hu; Xiaodong Ma; Trong-Kha Truong; Allen W Song; Hua Guo
Journal:  Magn Reson Med       Date:  2016-08-13       Impact factor: 4.668

5.  Minimizing the echo time in diffusion imaging using spiral readouts and a head gradient system.

Authors:  Bertram Jakob Wilm; Franciszek Hennel; Manuela Barbara Roesler; Markus Weiger; Klaas Paul Pruessmann
Journal:  Magn Reson Med       Date:  2020-06-23       Impact factor: 4.668

6.  An orthogonal shim coil for 3T brain imaging.

Authors:  Jiazheng Zhou; Jason P Stockmann; Nicolas Arango; Thomas Witzel; Klaus Scheffler; Lawrence L Wald; Fa-Hsuan Lin
Journal:  Magn Reson Med       Date:  2019-10-21       Impact factor: 4.668

7.  Fast submillimeter diffusion MRI using gSlider-SMS and SNR-enhancing joint reconstruction.

Authors:  Justin P Haldar; Yunsong Liu; Congyu Liao; Qiuyun Fan; Kawin Setsompop
Journal:  Magn Reson Med       Date:  2020-01-10       Impact factor: 4.668

8.  A robust multi-shot scan strategy for high-resolution diffusion weighted MRI enabled by multiplexed sensitivity-encoding (MUSE).

Authors:  Nan-Kuei Chen; Arnaud Guidon; Hing-Chiu Chang; Allen W Song
Journal:  Neuroimage       Date:  2013-01-28       Impact factor: 6.556

9.  High-fidelity, accelerated whole-brain submillimeter in vivo diffusion MRI using gSlider-spherical ridgelets (gSlider-SR).

Authors:  Gabriel Ramos-Llordén; Lipeng Ning; Congyu Liao; Rinat Mukhometzianov; Oleg Michailovich; Kawin Setsompop; Yogesh Rathi
Journal:  Magn Reson Med       Date:  2020-03-03       Impact factor: 3.737

10.  Reducing slab boundary artifacts in three-dimensional multislab diffusion MRI using nonlinear inversion for slab profile encoding (NPEN).

Authors:  Wenchuan Wu; Peter J Koopmans; Robert Frost; Karla L Miller
Journal:  Magn Reson Med       Date:  2015-10-28       Impact factor: 4.668

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  3 in total

Review 1.  Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome.

Authors:  Susie Y Huang; Thomas Witzel; Boris Keil; Alina Scholz; Mathias Davids; Peter Dietz; Elmar Rummert; Rebecca Ramb; John E Kirsch; Anastasia Yendiki; Qiuyun Fan; Qiyuan Tian; Gabriel Ramos-Llordén; Hong-Hsi Lee; Aapo Nummenmaa; Berkin Bilgic; Kawin Setsompop; Fuyixue Wang; Alexandru V Avram; Michal Komlosh; Dan Benjamini; Kulam Najmudeen Magdoom; Sudhir Pathak; Walter Schneider; Dmitry S Novikov; Els Fieremans; Slimane Tounekti; Choukri Mekkaoui; Jean Augustinack; Daniel Berger; Alexander Shapson-Coe; Jeff Lichtman; Peter J Basser; Lawrence L Wald; Bruce R Rosen
Journal:  Neuroimage       Date:  2021-08-28       Impact factor: 7.400

Review 2.  Mapping the human connectome using diffusion MRI at 300 mT/m gradient strength: Methodological advances and scientific impact.

Authors:  Qiuyun Fan; Cornelius Eichner; Maryam Afzali; Lars Mueller; Chantal M W Tax; Mathias Davids; Mirsad Mahmutovic; Boris Keil; Berkin Bilgic; Kawin Setsompop; Hong-Hsi Lee; Qiyuan Tian; Chiara Maffei; Gabriel Ramos-Llordén; Aapo Nummenmaa; Thomas Witzel; Anastasia Yendiki; Yi-Qiao Song; Chu-Chung Huang; Ching-Po Lin; Nikolaus Weiskopf; Alfred Anwander; Derek K Jones; Bruce R Rosen; Lawrence L Wald; Susie Y Huang
Journal:  Neuroimage       Date:  2022-02-23       Impact factor: 7.400

3.  Efficient T2 mapping with blip-up/down EPI and gSlider-SMS (T2 -BUDA-gSlider).

Authors:  Xiaozhi Cao; Kang Wang; Congyu Liao; Zijing Zhang; Siddharth Srinivasan Iyer; Zhifeng Chen; Wei-Ching Lo; Huafeng Liu; Hongjian He; Kawin Setsompop; Jianhui Zhong; Berkin Bilgic
Journal:  Magn Reson Med       Date:  2021-05-28       Impact factor: 3.737

  3 in total

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