Literature DB >> 33654966

pNP Transgenic RNAi System Manual in Drosophila.

Fang Wang1, Huan-Huan Qiao1, Rong-Gang Xu1, Jin Sun1, Ruibao Zhu1, Decai Mao1, Jian-Quan Ni1,2.   

Abstract

Much of our knowledge about the mechanisms underlying biological processes relies on genetic approaches, whereby gene activity is reduced and the phenotypic consequences of perturbation are analyzed in detail. For functional genomic studies, a specific, systematic, and cost-effective manner is critical. Transgenic RNAi system is the top priority choice to study gene functions due to its simple and practical characteristics in Drosophila. We established a novel system that works well in both soma and germ cells which is efficient and specific. With this system, we can precisely and efficiently modulate highly expressed genes, and simultaneously knock down multiple genes in one step. In this study, we provide a detailed protocol of the pNP system, which replaces other transgenic systems, and expect it can provide some help to researchers who are using this system.
Copyright © 2019 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Drosophila; Gal4/UAS system; Multiple genes knockdown; Transgenic RNAi; pNP vector

Year:  2019        PMID: 33654966      PMCID: PMC7854225          DOI: 10.21769/BioProtoc.3158

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  9 in total

Review 1.  In vivo RNAi: today and tomorrow.

Authors:  Norbert Perrimon; Jian-Quan Ni; Lizabeth Perkins
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

2.  Prevalence of off-target effects in Drosophila RNA interference screens.

Authors:  Yong Ma; Adrian Creanga; Lawrence Lum; Philip A Beachy
Journal:  Nature       Date:  2006-09-10       Impact factor: 49.962

3.  A Drosophila resource of transgenic RNAi lines for neurogenetics.

Authors:  Jian-Quan Ni; Lu-Ping Liu; Richard Binari; Robert Hardy; Hye-Seok Shim; Amanda Cavallaro; Matthew Booker; Barret D Pfeiffer; Michele Markstein; Hui Wang; Christians Villalta; Todd R Laverty; Lizabeth A Perkins; Norbert Perrimon
Journal:  Genetics       Date:  2009-06-01       Impact factor: 4.562

4.  A genome-scale shRNA resource for transgenic RNAi in Drosophila.

Authors:  Jian-Quan Ni; Rui Zhou; Benjamin Czech; Lu-Ping Liu; Laura Holderbaum; Donghui Yang-Zhou; Hye-Seok Shim; Rong Tao; Dominik Handler; Phillip Karpowicz; Richard Binari; Matthew Booker; Julius Brennecke; Lizabeth A Perkins; Gregory J Hannon; Norbert Perrimon
Journal:  Nat Methods       Date:  2011-04-03       Impact factor: 28.547

5.  A genome-wide transgenic RNAi library for conditional gene inactivation in Drosophila.

Authors:  Georg Dietzl; Doris Chen; Frank Schnorrer; Kuan-Chung Su; Yulia Barinova; Michaela Fellner; Beate Gasser; Kaolin Kinsey; Silvia Oppel; Susanne Scheiblauer; Africa Couto; Vincent Marra; Krystyna Keleman; Barry J Dickson
Journal:  Nature       Date:  2007-07-12       Impact factor: 49.962

6.  Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster.

Authors:  Jian-Quan Ni; Michele Markstein; Richard Binari; Barret Pfeiffer; Lu-Ping Liu; Christians Villalta; Matthew Booker; Lizabeth Perkins; Norbert Perrimon
Journal:  Nat Methods       Date:  2007-12-16       Impact factor: 28.547

7.  Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes.

Authors:  Michele Markstein; Chrysoula Pitsouli; Christians Villalta; Susan E Celniker; Norbert Perrimon
Journal:  Nat Genet       Date:  2008-03-02       Impact factor: 38.330

8.  Targeted gene expression as a means of altering cell fates and generating dominant phenotypes.

Authors:  A H Brand; N Perrimon
Journal:  Development       Date:  1993-06       Impact factor: 6.868

9.  An efficient and multiple target transgenic RNAi technique with low toxicity in Drosophila.

Authors:  Huan-Huan Qiao; Fang Wang; Rong-Gang Xu; Jin Sun; Ruibao Zhu; Decai Mao; Xingjie Ren; Xia Wang; Yu Jia; Ping Peng; Da Shen; Lu-Ping Liu; Zhijie Chang; Guirong Wang; Shao Li; Jun-Yuan Ji; Qingfei Liu; Jian-Quan Ni
Journal:  Nat Commun       Date:  2018-10-08       Impact factor: 14.919

  9 in total
  1 in total

1.  CRISPR-Based Transcriptional Activation in Drosophila.

Authors:  Yuting Han; Xinyi Lu; Yutong Li; Yuhao Qiu; Xizhi Dong; Xiaochen Li; Xu Si; Qingfei Liu; Jian-Quan Ni
Journal:  Methods Mol Biol       Date:  2022
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.