Literature DB >> 33633139

Precise higher-order reflectivity and morphology models for early diagnosis of diabetic retinopathy using OCT images.

A Sharafeldeen1, M Elsharkawy1, F Khalifa1, A Soliman1, M Ghazal2, M AlHalabi2, M Yaghi2, M Alrahmawy3, S Elmougy3, H S Sandhu4, A El-Baz5.   

Abstract

This study proposes a novel computer assisted diagnostic (CAD) system for early diagnosis of diabetic retinopathy (DR) using optical coherence tomography (OCT) B-scans. The CAD system is based on fusing novel OCT markers that describe both the morphology/anatomy and the reflectivity of retinal layers to improve DR diagnosis. This system separates retinal layers automatically using a segmentation approach based on an adaptive appearance and their prior shape information. High-order morphological and novel reflectivity markers are extracted from individual segmented layers. Namely, the morphological markers are layer thickness and tortuosity while the reflectivity markers are the 1st-order reflectivity of the layer in addition to local and global high-order reflectivity based on Markov-Gibbs random field (MGRF) and gray-level co-occurrence matrix (GLCM), respectively. The extracted image-derived markers are represented using cumulative distribution function (CDF) descriptors. The constructed CDFs are then described using their statistical measures, i.e., the 10th through 90th percentiles with a 10% increment. For individual layer classification, each extracted descriptor of a given layer is fed to a support vector machine (SVM) classifier with a linear kernel. The results of the four classifiers are then fused using a backpropagation neural network (BNN) to diagnose each retinal layer. For global subject diagnosis, classification outputs (probabilities) of the twelve layers are fused using another BNN to make the final diagnosis of the B-scan. This system is validated and tested on 130 patients, with two scans for both eyes (i.e. 260 OCT images), with a balanced number of normal and DR subjects using different validation metrics: 2-folds, 4-folds, 10-folds, and leave-one-subject-out (LOSO) cross-validation approaches. The performance of the proposed system was evaluated using sensitivity, specificity, F1-score, and accuracy metrics. The system's performance after the fusion of these different markers showed better performance compared with individual markers and other machine learning fusion methods. Namely, it achieved [Formula: see text], [Formula: see text], [Formula: see text], and [Formula: see text], respectively, using the LOSO cross-validation technique. The reported results, based on the integration of morphology and reflectivity markers and by using state-of-the-art machine learning classifications, demonstrate the ability of the proposed system to diagnose the DR early.

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Year:  2021        PMID: 33633139      PMCID: PMC7907116          DOI: 10.1038/s41598-021-83735-7

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  18 in total

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2.  Automated diagnosis of diabetic retinopathy using clinical biomarkers, optical coherence tomography (OCT), and OCT angiography.

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4.  Precise segmentation of multimodal images.

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5.  Automatic recognition of severity level for diagnosis of diabetic retinopathy using deep visual features.

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6.  Classification of SD-OCT Volumes Using Local Binary Patterns: Experimental Validation for DME Detection.

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Journal:  J Ophthalmol       Date:  2016-07-31       Impact factor: 1.909

7.  Deep Convolutional Neural Network-Based Early Automated Detection of Diabetic Retinopathy Using Fundus Image.

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8.  Glaucoma Diagnosis with Machine Learning Based on Optical Coherence Tomography and Color Fundus Images.

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Journal:  J Healthc Eng       Date:  2019-02-18       Impact factor: 2.682

9.  A feature agnostic approach for glaucoma detection in OCT volumes.

Authors:  Stefan Maetschke; Bhavna Antony; Hiroshi Ishikawa; Gadi Wollstein; Joel Schuman; Rahil Garnavi
Journal:  PLoS One       Date:  2019-07-01       Impact factor: 3.240

10.  Prediction of age-related macular degeneration disease using a sequential deep learning approach on longitudinal SD-OCT imaging biomarkers.

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Journal:  Sci Rep       Date:  2020-09-22       Impact factor: 4.379

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  7 in total

1.  A Novel Computer-Aided Diagnostic System for Early Detection of Diabetic Retinopathy Using 3D-OCT Higher-Order Spatial Appearance Model.

Authors:  Mohamed Elsharkawy; Ahmed Sharafeldeen; Ahmed Soliman; Fahmi Khalifa; Mohammed Ghazal; Eman El-Daydamony; Ahmed Atwan; Harpal Singh Sandhu; Ayman El-Baz
Journal:  Diagnostics (Basel)       Date:  2022-02-11

Review 2.  The Role of Different Retinal Imaging Modalities in Predicting Progression of Diabetic Retinopathy: A Survey.

Authors:  Mohamed Elsharkawy; Mostafa Elrazzaz; Ahmed Sharafeldeen; Marah Alhalabi; Fahmi Khalifa; Ahmed Soliman; Ahmed Elnakib; Ali Mahmoud; Mohammed Ghazal; Eman El-Daydamony; Ahmed Atwan; Harpal Singh Sandhu; Ayman El-Baz
Journal:  Sensors (Basel)       Date:  2022-05-04       Impact factor: 3.847

3.  How AI Can Help in the Diagnostic Dilemma of Pulmonary Nodules.

Authors:  Dalia Fahmy; Heba Kandil; Adel Khelifi; Maha Yaghi; Mohammed Ghazal; Ahmed Sharafeldeen; Ali Mahmoud; Ayman El-Baz
Journal:  Cancers (Basel)       Date:  2022-04-06       Impact factor: 6.639

4.  Predicting CT-Based Coronary Artery Disease Using Vascular Biomarkers Derived from Fundus Photographs with a Graph Convolutional Neural Network.

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Journal:  Diagnostics (Basel)       Date:  2022-06-04

Review 5.  The Role of Medical Image Modalities and AI in the Early Detection, Diagnosis and Grading of Retinal Diseases: A Survey.

Authors:  Gehad A Saleh; Nihal M Batouty; Sayed Haggag; Ahmed Elnakib; Fahmi Khalifa; Fatma Taher; Mohamed Abdelazim Mohamed; Rania Farag; Harpal Sandhu; Ashraf Sewelam; Ayman El-Baz
Journal:  Bioengineering (Basel)       Date:  2022-08-04

6.  Role of Optical Coherence Tomography Imaging in Predicting Progression of Age-Related Macular Disease: A Survey.

Authors:  Mohamed Elsharkawy; Mostafa Elrazzaz; Mohammed Ghazal; Marah Alhalabi; Ahmed Soliman; Ali Mahmoud; Eman El-Daydamony; Ahmed Atwan; Aristomenis Thanos; Harpal Singh Sandhu; Guruprasad Giridharan; Ayman El-Baz
Journal:  Diagnostics (Basel)       Date:  2021-12-09

7.  The Role of 3D CT Imaging in the Accurate Diagnosis of Lung Function in Coronavirus Patients.

Authors:  Ibrahim Shawky Farahat; Ahmed Sharafeldeen; Mohamed Elsharkawy; Ahmed Soliman; Ali Mahmoud; Mohammed Ghazal; Fatma Taher; Maha Bilal; Ahmed Abdel Khalek Abdel Razek; Waleed Aladrousy; Samir Elmougy; Ahmed Elsaid Tolba; Moumen El-Melegy; Ayman El-Baz
Journal:  Diagnostics (Basel)       Date:  2022-03-12
  7 in total

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