Literature DB >> 22057040

Accurate automatic analysis of cardiac cine images.

Fahmi Khalifa1, Garth M Beache, Georgy Gimel'farb, Guruprasad A Giridharan, Ayman El-Baz.   

Abstract

Acquisition of noncontrast agent cine cardiac magnetic resonance (CMR) gated images through the cardiac cycle is, at present, a well-established part of examining cardiac global function. However, regional quantification is less well established. We propose a new automated framework for analyzing the wall thickness and thickening function on these images that consists of three main steps. First, inner and outer wall borders are segmented from their surrounding tissues with a geometric deformable model guided by a special stochastic speed relationship. The latter accounts for Markov-Gibbs shape and appearance models of the object-of-interest and its background. In the second step, point-to-point correspondences between the inner and outer borders are found by solving the Laplace equation and provide initial estimates of the local wall thickness and the thickening function index. Finally, the effects of the segmentation error is reduced and a continuity analysis of the LV wall thickening is performed through iterative energy minimization using a generalized Gauss-Markov random field (GGMRF) image model. The framework was evaluated on 26 datasets from clinical cine CMR images that have been collected from patients with eleven independent studies, with chronic ischemic heart disease and heart damage. The performance evaluation of the proposed segmentation approach, based on the receiver operating characteristic (ROC) and Dice similarity coefficients (DSC) between manually drawn and automatically segmented contours, confirmed a high robustness and accuracy of the proposed segmentation approach. Furthermore, the Bland-Altman plot is used to assess the limit of agreement of our measurements of the global function parameters compared to the ground truth. Importantly, comparative results on the publicly available database (MICCAI 2009 Cardiac MR Left Ventricle Segmentation) demonstrated a superior performance of the proposed segmentation approach over published methods.
© 2011 IEEE

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Year:  2011        PMID: 22057040     DOI: 10.1109/TBME.2011.2174235

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  6 in total

1.  Intramyocardial strain estimation from cardiac cine MRI.

Authors:  Ahmed Elnakib; Garth M Beache; Georgy Gimel'farb; Ayman El-Baz
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-12-27       Impact factor: 2.924

2.  Novel stochastic framework for automatic segmentation of human thigh MRI volumes and its applications in spinal cord injured individuals.

Authors:  Samineh Mesbah; Ahmed M Shalaby; Sean Stills; Ahmed M Soliman; Andrea Willhite; Susan J Harkema; Enrico Rejc; Ayman S El-Baz
Journal:  PLoS One       Date:  2019-05-09       Impact factor: 3.240

3.  Precise higher-order reflectivity and morphology models for early diagnosis of diabetic retinopathy using OCT images.

Authors:  A Sharafeldeen; M Elsharkawy; F Khalifa; A Soliman; M Ghazal; M AlHalabi; M Yaghi; M Alrahmawy; S Elmougy; H S Sandhu; A El-Baz
Journal:  Sci Rep       Date:  2021-02-25       Impact factor: 4.379

Review 4.  A review of heart chamber segmentation for structural and functional analysis using cardiac magnetic resonance imaging.

Authors:  Peng Peng; Karim Lekadir; Ali Gooya; Ling Shao; Steffen E Petersen; Alejandro F Frangi
Journal:  MAGMA       Date:  2016-01-25       Impact factor: 2.310

5.  A novel approach for automatic visualization and activation detection of evoked potentials induced by epidural spinal cord stimulation in individuals with spinal cord injury.

Authors:  Samineh Mesbah; Claudia A Angeli; Robert S Keynton; Ayman El-Baz; Susan J Harkema
Journal:  PLoS One       Date:  2017-10-11       Impact factor: 3.240

6.  Time-efficient three-dimensional transmural scar assessment provides relevant substrate characterization for ventricular tachycardia features and long-term recurrences in ischemic cardiomyopathy.

Authors:  Susana Merino-Caviedes; Lilian K Gutierrez; José Manuel Alfonso-Almazán; Santiago Sanz-Estébanez; Lucilio Cordero-Grande; Jorge G Quintanilla; Javier Sánchez-González; Manuel Marina-Breysse; Carlos Galán-Arriola; Daniel Enríquez-Vázquez; Carlos Torres; Gonzalo Pizarro; Borja Ibáñez; Rafael Peinado; Jose Luis Merino; Julián Pérez-Villacastín; José Jalife; Mariña López-Yunta; Mariano Vázquez; Jazmín Aguado-Sierra; Juan José González-Ferrer; Nicasio Pérez-Castellano; Marcos Martín-Fernández; Carlos Alberola-López; David Filgueiras-Rama
Journal:  Sci Rep       Date:  2021-09-28       Impact factor: 4.379

  6 in total

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