Literature DB >> 16579381

Precise segmentation of multimodal images.

Aly A Farag1, Ayman S El-Baz, Georgy Gimel'farb.   

Abstract

We propose new techniques for unsupervised segmentation of multimodal grayscale images such that each region-of-interest relates to a single dominant mode of the empirical marginal probability distribution of grey levels. We follow the most conventional approaches in that initial images and desired maps of regions are described by a joint Markov-Gibbs random field (MGRF) model of independent image signals and interdependent region labels. However, our focus is on more accurate model identification. To better specify region borders, each empirical distribution of image signals is precisely approximated by a linear combination of Gaussians (LCG) with positive and negative components. We modify an expectation-maximization (EM) algorithm to deal with the LCGs and also propose a novel EM-based sequential technique to get a close initial LCG approximation with which the modified EM algorithm should start. The proposed technique identifies individual LCG models in a mixed empirical distribution, including the number of positive and negative Gaussians. Initial segmentation based on the LCG models is then iteratively refined by using the MGRF with analytically estimated potentials. The convergence of the overall segmentation algorithm at each stage is discussed. Experiments show that the developed techniques segment different types of complex multimodal medical images more accurately than other known algorithms.

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Year:  2006        PMID: 16579381     DOI: 10.1109/tip.2005.863949

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  14 in total

1.  New automated Markov-Gibbs random field based framework for myocardial wall viability quantification on agent enhanced cardiac magnetic resonance images.

Authors:  Ahmed Elnakib; Garth M Beache; Georgy Gimel'farb; Ayman El-Baz
Journal:  Int J Cardiovasc Imaging       Date:  2011-12-09       Impact factor: 2.357

2.  Connecting Markov random fields and active contour models: application to gland segmentation and classification.

Authors:  Jun Xu; James P Monaco; Rachel Sparks; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2017-03-28

3.  Accurate automated detection of autism related corpus callosum abnormalities.

Authors:  Ayman El-Baz; Ahmed Elnakib; Manuel F Casanova; Georgy Gimel'farb; Andrew E Switala; Desha Jordan; Sabrina Rainey
Journal:  J Med Syst       Date:  2010-05-06       Impact factor: 4.460

4.  Detection of microspheres in vivo using multispectral optoacoustic tomography.

Authors:  N Bhutiani; C W Kimbrough; N C Burton; S Morscher; M Egger; K McMasters; A Woloszynska-Read; A El-Baz; L R McNally
Journal:  Biotech Histochem       Date:  2017-02-06       Impact factor: 1.718

5.  High-throughput detection of prostate cancer in histological sections using probabilistic pairwise Markov models.

Authors:  James P Monaco; John E Tomaszewski; Michael D Feldman; Ian Hagemann; Mehdi Moradi; Parvin Mousavi; Alexander Boag; Chris Davidson; Purang Abolmaesumi; Anant Madabhushi
Journal:  Med Image Anal       Date:  2010-04-29       Impact factor: 8.545

6.  Class-specific weighting for Markov random field estimation: application to medical image segmentation.

Authors:  James P Monaco; Anant Madabhushi
Journal:  Med Image Anal       Date:  2012-07-16       Impact factor: 8.545

7.  A fast stochastic framework for automatic MR brain images segmentation.

Authors:  Marwa Ismail; Ahmed Soliman; Mohammed Ghazal; Andrew E Switala; Georgy Gimel'farb; Gregory N Barnes; Ashraf Khalil; Ayman El-Baz
Journal:  PLoS One       Date:  2017-11-14       Impact factor: 3.240

8.  Automatic Detection of 2D and 3D Lung Nodules in Chest Spiral CT Scans.

Authors:  Ayman El-Baz; Ahmed Elnakib; Mohamed Abou El-Ghar; Georgy Gimel'farb; Robert Falk; Aly Farag
Journal:  Int J Biomed Imaging       Date:  2013-02-12

9.  3D Kidney Segmentation from Abdominal Images Using Spatial-Appearance Models.

Authors:  Fahmi Khalifa; Ahmed Soliman; Adel Elmaghraby; Georgy Gimel'farb; Ayman El-Baz
Journal:  Comput Math Methods Med       Date:  2017-02-09       Impact factor: 2.238

10.  3D kidney segmentation from abdominal diffusion MRI using an appearance-guided deformable boundary.

Authors:  Mohamed Shehata; Ali Mahmoud; Ahmed Soliman; Fahmi Khalifa; Mohammed Ghazal; Mohamed Abou El-Ghar; Moumen El-Melegy; Ayman El-Baz
Journal:  PLoS One       Date:  2018-07-13       Impact factor: 3.240

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