Literature DB >> 33623036

Automated discovery of a robust interatomic potential for aluminum.

Justin S Smith1,2, Benjamin Nebgen3, Nithin Mathew4,5, Jie Chen6, Nicholas Lubbers7, Leonid Burakovsky4, Sergei Tretiak4, Hai Ah Nam7, Timothy Germann4, Saryu Fensin6, Kipton Barros8.   

Abstract

Machine learning, trained on quantum mechanics (QM) calculations, is a powerful tool for modeling potential energy surfaces. A critical factor is the quality and diversity of the training dataset. Here we present a highly automated approach to dataset construction and demonstrate the method by building a potential for elemental aluminum (ANI-Al). In our active learning scheme, the ML potential under development is used to drive non-equilibrium molecular dynamics simulations with time-varying applied temperatures. Whenever a configuration is reached for which the ML uncertainty is large, new QM data is collected. The ML model is periodically retrained on all available QM data. The final ANI-Al potential makes very accurate predictions of radial distribution function in melt, liquid-solid coexistence curve, and crystal properties such as defect energies and barriers. We perform a 1.3M atom shock simulation and show that ANI-Al force predictions shine in their agreement with new reference DFT calculations.

Entities:  

Year:  2021        PMID: 33623036     DOI: 10.1038/s41467-021-21376-0

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  26 in total

1.  A neural network potential-energy surface for the water dimer based on environment-dependent atomic energies and charges.

Authors:  Tobias Morawietz; Vikas Sharma; Jörg Behler
Journal:  J Chem Phys       Date:  2012-02-14       Impact factor: 3.488

2.  Generalized neural-network representation of high-dimensional potential-energy surfaces.

Authors:  Jörg Behler; Michele Parrinello
Journal:  Phys Rev Lett       Date:  2007-04-02       Impact factor: 9.161

3.  Spherical harmonics based descriptor for neural network potentials: Structure and dynamics of Au147 nanocluster.

Authors:  Shweta Jindal; Siva Chiriki; Satya S Bulusu
Journal:  J Chem Phys       Date:  2017-05-28       Impact factor: 3.488

4.  SchNet - A deep learning architecture for molecules and materials.

Authors:  K T Schütt; H E Sauceda; P-J Kindermans; A Tkatchenko; K-R Müller
Journal:  J Chem Phys       Date:  2018-06-28       Impact factor: 3.488

5.  Hierarchical modeling of molecular energies using a deep neural network.

Authors:  Nicholas Lubbers; Justin S Smith; Kipton Barros
Journal:  J Chem Phys       Date:  2018-06-28       Impact factor: 3.488

6.  Discovering a Transferable Charge Assignment Model Using Machine Learning.

Authors:  Andrew E Sifain; Nicholas Lubbers; Benjamin T Nebgen; Justin S Smith; Andrey Y Lokhov; Olexandr Isayev; Adrian E Roitberg; Kipton Barros; Sergei Tretiak
Journal:  J Phys Chem Lett       Date:  2018-07-27       Impact factor: 6.475

7.  Machine Learning of Partial Charges Derived from High-Quality Quantum-Mechanical Calculations.

Authors:  Patrick Bleiziffer; Kay Schaller; Sereina Riniker
Journal:  J Chem Inf Model       Date:  2018-03-07       Impact factor: 4.956

8.  Energy-free machine learning force field for aluminum.

Authors:  Ivan Kruglov; Oleg Sergeev; Alexey Yanilkin; Artem R Oganov
Journal:  Sci Rep       Date:  2017-08-17       Impact factor: 4.379

9.  ANI-1: an extensible neural network potential with DFT accuracy at force field computational cost.

Authors:  J S Smith; O Isayev; A E Roitberg
Journal:  Chem Sci       Date:  2017-02-08       Impact factor: 9.825

Review 10.  Machine learning for molecular and materials science.

Authors:  Keith T Butler; Daniel W Davies; Hugh Cartwright; Olexandr Isayev; Aron Walsh
Journal:  Nature       Date:  2018-07-25       Impact factor: 49.962

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  2 in total

1.  Deep learning of dynamically responsive chemical Hamiltonians with semiempirical quantum mechanics.

Authors:  Guoqing Zhou; Nicholas Lubbers; Kipton Barros; Sergei Tretiak; Benjamin Nebgen
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-01       Impact factor: 12.779

2.  Crystal structure prediction by combining graph network and optimization algorithm.

Authors:  Guanjian Cheng; Xin-Gao Gong; Wan-Jian Yin
Journal:  Nat Commun       Date:  2022-03-21       Impact factor: 14.919

  2 in total

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