Literature DB >> 28571343

Spherical harmonics based descriptor for neural network potentials: Structure and dynamics of Au147 nanocluster.

Shweta Jindal1, Siva Chiriki1, Satya S Bulusu1.   

Abstract

We propose a highly efficient method for fitting the potential energy surface of a nanocluster using a spherical harmonics based descriptor integrated with an artificial neural network. Our method achieves the accuracy of quantum mechanics and speed of empirical potentials. For large sized gold clusters (Au147), the computational time for accurate calculation of energy and forces is about 1.7 s, which is faster by several orders of magnitude compared to density functional theory (DFT). This method is used to perform the global minimum optimizations and molecular dynamics simulations for Au147, and it is found that its global minimum is not an icosahedron. The isomer that can be regarded as the global minimum is found to be 4 eV lower in energy than the icosahedron and is confirmed from DFT. The geometry of the obtained global minimum contains 105 atoms on the surface and 42 atoms in the core. A brief study on the fluxionality in Au147 is performed, and it is concluded that Au147 has a dynamic surface, thus opening a new window for studying its reaction dynamics.

Entities:  

Year:  2017        PMID: 28571343      PMCID: PMC5440236          DOI: 10.1063/1.4983392

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  26 in total

1.  Generalized Gradient Approximation Made Simple.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  Oxidation-resistant gold-55 clusters.

Authors:  H-G Boyen; G Kästle; F Weigl; B Koslowski; C Dietrich; P Ziemann; J P Spatz; S Riethmüller; C Hartmann; M Möller; G Schmid; M G Garnier; P Oelhafen
Journal:  Science       Date:  2002-08-30       Impact factor: 47.728

3.  Ab initio molecular-dynamics simulation of the liquid-metal-amorphous-semiconductor transition in germanium.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1994-05-15

4.  Gaussian approximation potentials: the accuracy of quantum mechanics, without the electrons.

Authors:  Albert P Bartók; Mike C Payne; Risi Kondor; Gábor Csányi
Journal:  Phys Rev Lett       Date:  2010-04-01       Impact factor: 9.161

Review 5.  Biological applications of gold nanoparticles.

Authors:  Ralph A Sperling; Pilar Rivera Gil; Feng Zhang; Marco Zanella; Wolfgang J Parak
Journal:  Chem Soc Rev       Date:  2008-07-17       Impact factor: 54.564

6.  Learning molecular energies using localized graph kernels.

Authors:  Grégoire Ferré; Terry Haut; Kipton Barros
Journal:  J Chem Phys       Date:  2017-03-21       Impact factor: 3.488

7.  Atomically precise gold nanoclusters as new model catalysts.

Authors:  Gao Li; Rongchao Jin
Journal:  Acc Chem Res       Date:  2013-03-27       Impact factor: 22.384

8.  Quantum-chemical insights from deep tensor neural networks.

Authors:  Kristof T Schütt; Farhad Arbabzadah; Stefan Chmiela; Klaus R Müller; Alexandre Tkatchenko
Journal:  Nat Commun       Date:  2017-01-09       Impact factor: 14.919

9.  Machine learning of accurate energy-conserving molecular force fields.

Authors:  Stefan Chmiela; Alexandre Tkatchenko; Huziel E Sauceda; Igor Poltavsky; Kristof T Schütt; Klaus-Robert Müller
Journal:  Sci Adv       Date:  2017-05-05       Impact factor: 14.136

10.  Unraveling structures of protection ligands on gold nanoparticle Au68(SH)32.

Authors:  Wen Wu Xu; Yi Gao; Xiao Cheng Zeng
Journal:  Sci Adv       Date:  2015-04-24       Impact factor: 14.136

View more
  2 in total

1.  Contrasting motif preferences of platinum and gold nanoclusters between 55 and 309 atoms.

Authors:  Stephanie G Lambie; Geoffrey R Weal; Caroline E Blackmore; Richard E Palmer; Anna L Garden
Journal:  Nanoscale Adv       Date:  2019-05-03

2.  Automated discovery of a robust interatomic potential for aluminum.

Authors:  Justin S Smith; Benjamin Nebgen; Nithin Mathew; Jie Chen; Nicholas Lubbers; Leonid Burakovsky; Sergei Tretiak; Hai Ah Nam; Timothy Germann; Saryu Fensin; Kipton Barros
Journal:  Nat Commun       Date:  2021-02-23       Impact factor: 14.919

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.