Literature DB >> 33446424

Advances in the World of Bacterial Microcompartments.

Andrew M Stewart1, Katie L Stewart1, Todd O Yeates2, Thomas A Bobik3.   

Abstract

Bacterial microcompartments (MCPs) are extremely large (100-400 nm) and diverse proteinaceous organelles that compartmentalize multistep metabolic pathways, increasing their efficiency and sequestering toxic and/or volatile intermediates. This review highlights recent studies that have expanded our understanding of the diversity, structure, function, and potential biotechnological uses of MCPs. Several new types of MCPs have been identified and characterized revealing new functions and potential new associations with human disease. Recent structural studies of MCP proteins and recombinant MCP shells have provided new insights into MCP assembly and mechanisms and raised new questions about MCP structure. We also discuss recent work on biotechnology applications that use MCP principles to develop nanobioreactors, nanocontainers, and molecular scaffolds.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  carboxysome; enzyme scaffold; glycyl radical; microcompartment; nanocompartment

Mesh：

Substances：

Year:  2021        PMID： 33446424      PMCID： PMC8052279          DOI： 10.1016/j.tibs.2020.12.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN： 0968-0004            Impact factor:   13.807


  99 in total

1.  Structural insight into the mechanisms of transport across the Salmonella enterica Pdu microcompartment shell.

Authors:  Christopher S Crowley; Duilio Cascio; Michael R Sawaya; Jeffery S Kopstein; Thomas A Bobik; Todd O Yeates
Journal:  J Biol Chem       Date:  2010-09-24       Impact factor: 5.157

Review 2.  Biotechnological Advances in Bacterial Microcompartment Technology.

Authors:  Matthew J Lee; David J Palmer; Martin J Warren
Journal:  Trends Biotechnol       Date:  2018-09-17       Impact factor: 19.536

3.  Building a toolbox of protein scaffolds for future immobilization of biocatalysts.

Authors:  Sarah Schmidt-Dannert; Guoqiang Zhang; Timothy Johnston; Maureen B Quin; Claudia Schmidt-Dannert
Journal:  Appl Microbiol Biotechnol       Date:  2018-07-31       Impact factor: 4.813

Review 4.  Inclusion bodies of prokaryotes.

Authors:  J M Shively
Journal:  Annu Rev Microbiol       Date:  1974       Impact factor: 15.500

5.  Engineered synthetic scaffolds for organizing proteins within the bacterial cytoplasm.

Authors:  Matthew J Lee; Judith Mantell; Lorna Hodgson; Dominic Alibhai; Jordan M Fletcher; Ian R Brown; Stefanie Frank; Wei-Feng Xue; Paul Verkade; Derek N Woolfson; Martin J Warren
Journal:  Nat Chem Biol       Date:  2017-12-11       Impact factor: 15.040

6.  Structure of a novel 13 nm dodecahedral nanocage assembled from a redesigned bacterial microcompartment shell protein.

Authors:  J Jorda; D J Leibly; M C Thompson; T O Yeates
Journal:  Chem Commun (Camb)       Date:  2016-03-18       Impact factor: 6.222

7.  Structure of a bacterial microcompartment shell protein bound to a cobalamin cofactor.

Authors:  Michael C Thompson; Christopher S Crowley; Jeffrey Kopstein; Thomas A Bobik; Todd O Yeates
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-14       Impact factor: 1.056

8.  Characterization and detection of a widely distributed gene cluster that predicts anaerobic choline utilization by human gut bacteria.

Authors:  Ana Martínez-del Campo; Smaranda Bodea; Hilary A Hamer; Jonathan A Marks; Henry J Haiser; Peter J Turnbaugh; Emily P Balskus
Journal:  MBio       Date:  2015-04-14       Impact factor: 7.867

9.  Multivalent interactions between CsoS2 and Rubisco mediate α-carboxysome formation.

Authors:  Luke M Oltrogge; Thawatchai Chaijarasphong; Allen W Chen; Eric R Bolin; Susan Marqusee; David F Savage
Journal:  Nat Struct Mol Biol       Date:  2020-03-02       Impact factor: 15.369

10.  De novo targeting to the cytoplasmic and luminal side of bacterial microcompartments.

Authors:  Matthew J Lee; Judith Mantell; Ian R Brown; Jordan M Fletcher; Paul Verkade; Richard W Pickersgill; Derek N Woolfson; Stefanie Frank; Martin J Warren
Journal:  Nat Commun       Date:  2018-08-24       Impact factor: 14.919
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  4 in total

1.  Biogenesis of a bacterial metabolosome for propanediol utilization.

Authors:  Mengru Yang; Nicolas Wenner; Gregory F Dykes; Yan Li; Xiaojun Zhu; Yaqi Sun; Fang Huang; Jay C D Hinton; Lu-Ning Liu
Journal:  Nat Commun       Date:  2022-05-25       Impact factor: 17.694

2.  Chemical probing provides insight into the native assembly state of a bacterial microcompartment.

Authors:  Daniel S Trettel; William Resager; Beatrix M Ueberheide; Conor C Jenkins; Wade C Winkler
Journal:  Structure       Date:  2022-02-24       Impact factor: 5.871

3.  Structural characterization of hexameric shell proteins from two types of choline-utilization bacterial microcompartments.

Authors:  Jessica M Ochoa; Oscar Mijares; Andrea A Acosta; Xavier Escoto; Nancy Leon-Rivera; Joanna D Marshall; Michael R Sawaya; Todd O Yeates
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2021-08-24       Impact factor: 1.072

Review 4.  Selective molecular transport across the protein shells of bacterial microcompartments.

Authors:  Thomas A Bobik; Andrew M Stewart
Journal:  Curr Opin Microbiol       Date:  2021-06-01       Impact factor: 7.584
  4 in total

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