Literature DB >> 33411796

Transcriptional profiling of pediatric cholestatic livers identifies three distinct macrophage populations.

Sarah A Taylor1, Shang-Yang Chen2, Gaurav Gadhvi2, Liang Feng1, Kyle D Gromer1, Hiam Abdala-Valencia3, Kiwon Nam3, Salina T Dominguez2, Anna B Montgomery2, Paul A Reyfman3, Lorena Ostilla1, Joshua B Wechsler1, Carla M Cuda2, Richard M Green4, Harris Perlman2, Deborah R Winter2.   

Abstract

BACKGROUND & AIMS: Limited understanding of the role for specific macrophage subsets in the pathogenesis of cholestatic liver injury is a barrier to advancing medical therapy. Macrophages have previously been implicated in both the mal-adaptive and protective responses in obstructive cholestasis. Recently two macrophage subsets were identified in non-diseased human liver; however, no studies to date fully define the heterogeneous macrophage subsets during the pathogenesis of cholestasis. Here, we aim to further characterize the transcriptional profile of macrophages in pediatric cholestatic liver disease.
METHODS: We isolated live hepatic immune cells from patients with biliary atresia (BA), Alagille syndrome (ALGS), and non-cholestatic pediatric liver by fluorescence activated cell sorting. Through single-cell RNA sequencing analysis and immunofluorescence, we characterized cholestatic macrophages. We next compared the transcriptional profile of pediatric cholestatic and non-cholestatic macrophage populations to previously published data on normal adult hepatic macrophages.
RESULTS: We identified 3 distinct macrophage populations across cholestatic liver samples and annotated them as lipid-associated macrophages, monocyte-like macrophages, and adaptive macrophages based on their transcriptional profile. Immunofluorescence of liver tissue using markers for each subset confirmed their presence across BA (n = 6) and ALGS (n = 6) patients. Cholestatic macrophages demonstrated reduced expression of immune regulatory genes as compared to normal hepatic macrophages and were distinct from macrophage populations defined in either healthy adult or pediatric non-cholestatic liver.
CONCLUSIONS: We are the first to perform single-cell RNA sequencing on human pediatric cholestatic liver and identified three macrophage subsets with distinct transcriptional signatures from healthy liver macrophages. Further analyses will identify similarities and differences in these macrophage sub-populations across etiologies of cholestatic liver disease. Taken together, these findings may allow for future development of targeted therapeutic strategies to reprogram macrophages to an immune regulatory phenotype and reduce cholestatic liver injury.

Entities:  

Year:  2021        PMID: 33411796      PMCID: PMC7790256          DOI: 10.1371/journal.pone.0244743

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  47 in total

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2.  Mechanisms of liver injury in high fat sugar diet fed mice that lack hepatocyte X-box binding protein 1.

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Journal:  PLoS One       Date:  2022-01-14       Impact factor: 3.240

Review 3.  Unraveling the Complexity of Liver Disease One Cell at a Time.

Authors:  Gary D Bader; Ian D McGilvray; Sonya A MacParland; Jawairia Atif; Cornelia Thoeni
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4.  Identification of Liver Immune Microenvironment-Related Hub Genes in Liver of Biliary Atresia.

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  4 in total

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