| Literature DB >> 33393675 |
David K Ryan1,2, Ville Karhunen3, Drew J Walker1,2, Dipender Gill1,2,3,4.
Abstract
Inhibition of interleukin 6 (IL-6) signalling has been proposed as a potential cardioprotective strategy for patients with chronic kidney disease (CKD), but the direct effects of IL-6 inhibition on renal function are not known. A Mendelian randomization (MR) study was performed to investigate the association of genetically proxied inhibition of IL-6 signalling with estimated glomerular filtration rate (eGFR), CKD and blood urea nitrogen (BUN). Inverse-variance weighted MR was used as the main analysis, with sensitivity analyses performed using simple median, weighted median and MR-Egger methods. There was no evidence for an association of genetically proxied inhibition of IL-6 signalling (scaled per standard deviation unit decrease in C-reactive protein) with log eGFR (0.001, 95% confidence interval -0.004-0.007), BUN (0.009, 95% confidence interval -0.003-0.021) and CKD (odds ratio 0.948, 95% confidence interval 0.822-1.094). These findings do not raise concerns for IL-6 signalling having large adverse effects on renal function.Entities:
Keywords: Mendelian randomization study; cardiovascular disease; chronic kidney disease; interleukin-6
Mesh:
Substances:
Year: 2021 PMID: 33393675 PMCID: PMC8327328 DOI: 10.1111/bcp.14725
Source DB: PubMed Journal: Br J Clin Pharmacol ISSN: 0306-5251 Impact factor: 4.335
Data sources for exposure and outcomes
| Data | Data source | Population ancestry | Sample size | Exposure definition | Adjustments |
|---|---|---|---|---|---|
|
Genetic variants in or near IL‐6R associated with variation in CRP | UK Biobank | White British | 337 199 | Standard deviation change in CRP (4.35 mg/L) per copy increment of the effect allele | Age, sex and principal components of genetic ancestry |
| Blood urea nitrogen (BUN) | Chronic kidney disease genetics consortium meta‐analysis (n = 24 studies) | European | 243 029 |
Change in BUN (mg/dL) per copy increment of effect allele | Sex and age in all included studies, with some studies in the meta‐analysis further adjusting for study site, relatedness and principal components of genetic ancestry |
| Estimated glomerular filtration rate (eGFR) | Chronic kidney disease genetics consortium meta‐analysis (n = 42 studies) | European | 567 460 | Change in log eGFR (mL min−1 per 1.73 m2) per copy increment of effect allele | |
|
Chronic kidney disease Binary outcome eGFR > 60 mL min−1 per 1.73 m2 | Chronic kidney disease genetics consortium meta‐analysis (n = 23 studies) | European |
480 698 (41 395 cases, 439 303 controls) |
Log odds ratio for CKD per copy increment of effect allele |
Table 1 describes the source, population ancestry, sample size and exposure definitions for the genome‐wide association studies used in the present Mendelian randomization analysis.
Instrumental variables: variants employed as instrumental variables to proxy inhibition of IL‐6 signalling (associations with C‐reactive protein are detailed)
| SNP | Effect allele | Other allele | Effect allele frequency | Beta | Standard error |
|
|
|
|---|---|---|---|---|---|---|---|---|
| rs112505856 | T | C | 0.039 | −0.046 | 0.006 | 8.82E‐13 | 1.58E‐04 | 74.48 |
| rs16835819 | C | T | 0.018 | −0.077 | 0.009 | 7.73E‐18 | 2.15E‐04 | 101.05 |
| rs61806853 | C | T | 0.050 | −0.044 | 0.006 | 2.26E‐15 | 1.79E‐04 | 84.22 |
| rs79505546 | T | C | 0.017 | −0.054 | 0.009 | 7.21E‐09 | 9.62E‐05 | 45.2 |
| rs1194610 | C | T | 0.235 | 0.020 | 0.003 | 6.01E‐13 | 1.48E‐04 | 69.47 |
| rs67156297 | A | G | 0.262 | 0.036 | 0.003 | 9.96E‐40 | 4.97E‐04 | 233.76 |
| rs12077265 | G | T | 0.155 | −0.056 | 0.003 | 6.24E‐64 | 8.20E‐04 | 385.54 |
| rs4133213 | A | C | 0.450 | −0.086 | 0.003 | 1.00E‐200 | 3.63E‐03 | 1713.82 |
| rs79219014 | T | G | 0.028 | −0.086 | 0.007 | 1.26E‐31 | 3.92E‐04 | 184.24 |
| rs186110340 | G | C | 0.024 | 0.056 | 0.008 | 5.02E‐12 | 1.48E‐04 | 69.61 |
| rs139952834 | T | C | 0.013 | 0.062 | 0.011 | 3.36E‐08 | 9.84E‐05 | 46.23 |
| rs113580743 | A | G | 0.039 | 0.049 | 0.006 | 4.12E‐15 | 1.81E‐04 | 85.11 |
| rs139460294 | C | T | 0.016 | −0.059 | 0.010 | 4.48E‐09 | 1.06E‐04 | 49.83 |
| rs140615642 | C | T | 0.020 | −0.078 | 0.009 | 8.53E‐19 | 2.37E‐04 | 111.53 |
| rs116059394 | G | A | 0.059 | 0.049 | 0.005 | 8.73E‐21 | 2.60E‐04 | 122.33 |
| rs56100876 | A | G | 0.019 | −0.109 | 0.009 | 2.35E‐33 | 4.41E‐04 | 207.24 |
| rs4845645 | A | T | 0.173 | −0.051 | 0.003 | 1.31E‐55 | 7.34E‐04 | 344.98 |
| rs77994623 | T | C | 0.167 | 0.047 | 0.003 | 7.08E‐49 | 6.16E‐04 | 289.57 |
| rs76289529 | T | C | 0.038 | −0.047 | 0.006 | 8.22E‐14 | 1.64E‐04 | 76.86 |
| rs12750774 | A | G | 0.316 | −0.064 | 0.003 | 1.33E‐137 | 1.77E‐03 | 834.94 |
| rs147483024 | T | G | 0.018 | 0.066 | 0.010 | 7.47E‐12 | 1.55E‐04 | 73.01 |
| rs3766925 | A | T | 0.227 | −0.016 | 0.003 | 4.12E‐08 | 8.57E‐05 | 40.28 |
| rs12059682 | C | T | 0.206 | 0.046 | 0.003 | 5.39E‐55 | 6.97E‐04 | 327.51 |
| rs188727323 | T | C | 0.189 | −0.044 | 0.003 | 5.35E‐39 | 5.80E‐04 | 272.64 |
| rs4845657 | C | T | 0.199 | 0.040 | 0.003 | 1.49E‐39 | 5.03E‐04 | 236.5 |
| rs12757447 | G | T | 0.016 | −0.063 | 0.010 | 1.43E‐10 | 1.23E‐04 | 58 |
| rs79753070 | A | G | 0.025 | −0.052 | 0.008 | 8.96E‐11 | 1.29E‐04 | 60.64 |
| rs34693607 | G | C | 0.214 | −0.033 | 0.003 | 2.09E‐29 | 3.62E‐04 | 170.15 |
| rs11264245 | T | C | 0.057 | −0.029 | 0.005 | 3.12E‐08 | 8.78E‐05 | 41.25 |
| rs7523010 | A | T | 0.213 | 0.025 | 0.003 | 2.13E‐15 | 2.02E‐04 | 94.96 |
Table 2 shows the summary data for the variants that proxy IL‐6 signalling inhibition. SNP, single‐nucleotide polymorphism. Beta is the standard deviation unit change in CRP (4.35 mg/L) per copy increment in the effect allele. R 2 represents the variance in CRP explained by the respective genetic variant. The F‐statistic measures the strength of the instrumental variable with the exposure. In an additive model assuming independent variants, these instrumental variables explain 0.0138 of the variance in the exposure.
FIGURE 1Effects of genetically proxied IL‐6 signal inhibition on renal function
| SNP | Effect allele | Other allele | Beta estimate for association with CRP (UK Biobank) | Beta estimate for association with IL6R (INTERVAL study) | Beta estimate for association with serum IL‐6 (INTERVAL study) |
|---|---|---|---|---|---|
| rs112505856 | T | C | −0.046 | 0.316 | |
| rs16835819 | C | T | −0.077 | 0.453 | |
| rs61806853 | C | T | −0.044 | 0.496 | |
| rs79505546 | T | C | −0.054 | 0.356 | |
| rs1194610 | C | T | 0.020 | 0.190 | |
| rs67156297 | A | G | 0.036 | −0.254 | −0.254 |
| rs12077265 | G | T | −0.056 | −0.075 | −0.044 |
| rs4133213 | A | C | −0.086 | 0.974 | 0.084 |
| rs79219014 | T | G | −0.086 | 0.758 | 0.087 |
| rs186110340 | G | C | 0.056 | −0.548 | |
| rs139952834 | T | C | 0.062 | −0.651 | |
| rs113580743 | A | G | 0.049 | −0.514 | |
| rs139460294 | C | T | −0.058 | 0.384 | 0.136 |
| rs140615642 | C | T | −0.078 | 0.547 | |
| rs116059394 | G | A | 0.048 | −0.576 | −0.064 |
| rs56100876 | A | G | −0.109 | 0.584 | |
| rs4845645 | A | T | −0.051 | 0.219 | 0.082 |
| rs77994623 | T | C | 0.047 | −0.618 | |
| rs76289529 | T | C | −0.047 | 0.666 | 0.107 |
| rs12750774 | A | G | −0.064 | 0.549 | 0.057 |
| rs147483024 | T | G | 0.066 | −0.308 | −0.156 |
| rs3766925 | A | T | −0.016 | 0.184 | −0.049 |
| rs12059682 | C | T | 0.046 | −0.383 | −0.055 |
| rs188727323 | T | C | −0.043 | ||
| rs4845657 | C | T | 0.040 | −0.273 | |
| rs12757447 | G | T | −0.063 | 0.253 | |
| rs79753070 | A | G | −0.052 | 0.571 | 0.142 |
| rs34693607 | G | C | −0.033 | 0.196 | 0.058 |
| rs11264245 | T | C | −0.029 | 0.447 | |
| rs7523010 | A | T | 0.025 | −0.049 |
Chronic kidney disease: effects of genetically proxied IL‐6 inhibition on chronic kidney disease
| Method | Estimate (standard error) | Odds ratio (95% confidence interval) |
|
|---|---|---|---|
| Inverse‐variance weighted | −0.053 (0.073) | 0.948 (0.822‐1.094) | 0.474 |
| Simple median | −0.081 (0.103) | 0.922 (0.754‐1.128) | 0.431 |
| Weighted median | −0.059 (0.094) | 0.943 (0.784‐1.133) | 0.528 |
| MR‐Egger | 0.013 (0.174) | 1.013 (0.720‐1.425) | 0.942 |
| MR‐Egger intercept | −0.004 (0.174) | 0.996 (0.708‐1.401) | 0.681 |
Cochran's Q‐statistic: inverse‐variance weighted analysis 35.38 (SNPs 27), P = 0.13.
Log estimated glomerular filtration rate: association of genetically proxied inhibition of IL‐6 signalling with log odds of estimated glomerular filtration rate
| Method | Estimate (standard error) | 95% confidence interval | P value |
|---|---|---|---|
| Inverse‐variance weighted | 0.001 (0.003) | −0.004‐0.007 | 0.599 |
| Simple median | 0.002 (0.004) | −0.007‐0.010 | 0.721 |
| Weighted median | 0.002 (0.004) | −0.005‐0.009 | 0.620 |
| MR‐Egger | 0.001 (0.007) | −0.012‐0.014 | 0.908 |
| MR‐Egger intercept | 0.0004 (0.0003) | −0.0006‐0.0007 | 0.912 |
Cochran's Q‐statistic: inverse‐variance weighted analysis 37.93 (SNPs 27), P = 0.08.
Blood urea nitrogen: effects of genetically proxied IL‐6 inhibition on blood urea nitrogen
| Method | Estimate (standard error) | 95% confidence interval |
|
|---|---|---|---|
| Inverse‐variance weighted | 0.009 (0.006) | −0.003‐0.021 | 0.121 |
| Simple median | 0.005 (0.011) | −0.017‐0.027 | 0.666 |
| Weighted median | 0.012 (0.009) | −0.006‐0.030 | 0.183 |
| MR‐Egger | 0.004 (0.014) | −0.023‐0.031 | 0.798 |
| MR‐Egger intercept | 0.0003 (0.0007) | −0.0016‐0.001 | 0.662 |
Cochran's Q‐statistic: inverse‐variance weighted analysis 22.24 (SNPs 25), P = 0.62.
| Continuous outcomes | ||
|---|---|---|
| Phenotype | n total | Detectable MR‐estimate at 80% power |
| Log eGFR | 567 460 | ≤−0.0000405, ≥0.000034 |
| BUN | 243 029 | ≤−0.0158, ≥0.0157 |
| SNP | Effect allele | Other allele | Effect allele frequency | Beta | Standard error |
|
|
|
|---|---|---|---|---|---|---|---|---|
| rs73026617 | T | C | 0.097 | 0.0474 | 0.0068 | 3.16E‐12 | 3.58E‐04 | 73.16 |
| rs12083537 | A | G | 0.193 | 0.0643 | 0.0053 | 7.14E‐34 | 1.17E‐03 | 239.60 |
| rs4556348 | T | C | 0.148 | 0.0541 | 0.0067 | 6.77E‐16 | 6.71E‐04 | 137.25 |
| rs2228145 | A | C | 0.36 | 0.0899 | 0.0042 | 1.21E‐101 | 3.39E‐03 | 694.37 |
| rs11264224 | A | C | 0.193 | 0.0465 | 0.0057 | 3.41E‐16 | 6.12E‐04 | 125.23 |
| rs12059682 | T | C | 0.196 | −0.0441 | 0.0049 | 2.26E‐19 | 5.57E‐04 | 113.96 |
| rs34693607 | C | G | 0.184 | 0.0368 | 0.0057 | 1.07E‐10 | 3.70E‐04 | 75.59 |
Chronic kidney disease: association of genetically proxied IL‐6 inhibition on chronic kidney disease
| Method | Estimate (standard error) | Odds ratio (95% confidence interval) |
|
|---|---|---|---|
| Inverse‐variance weighted | −0.018 (0.052) | 0.982 (0.887‐1.087) | 0.723 |
| Simple median | −0.009 (0.111) | 0.991 (0.797‐1.232) | 0.936 |
| Weighted median | −0.006 (0.088) | 0.994 (0.837‐1.181) | 0.943 |
| MR‐Egger | 0.105 (0.239) | 1.11 (0.695‐1.774) | 0.678 |
| MR‐Egger intercept | −0.008 (0.011) | 0.992 (0.971‐1.013) | 0.490 |
Cochran's Q statistic: Inverse‐variance weighted analysis: 2.96 (SNPs 6), P = 0.814.
Log estimated glomerular filtration rate: association of genetically proxied inhibition of IL‐6 signalling with log odds of estimated glomerular filtration rate
| Method | Estimate (standard error) | 95% confidence interval |
|
|---|---|---|---|
| Inverse‐variance weighted | 0.001 (0.004) | −0.007‐0.009 | 0.862 |
| Simple median | −0.004 (0.005) | −0.014‐0.006 | 0.376 |
| Weighted median | −0.001 (0.003) | −0.007‐0.005 | 0.688 |
| MR‐Egger | −0.006 (0.013) | −0.031‐0.019 | 0.687 |
| MR‐Egger intercept | 0.0004 (0.0008) | −0.002‐0.001 | 0.636 |
Cochran's Q statistic: Inverse‐variance weighted analysis 11.98 (SNPs 5), P = 0.062.
Blood urea nitrogen: association of genetically proxied IL‐6 inhibition on blood urea nitrogen
| Method | Estimate (standard error) | 95% confidence interval |
|
|---|---|---|---|
| Inverse‐variance weighted | 0.008 (0.007) | −0.006‐0.022 | 0.218 |
| Simple median | 0.003 (0.010) | −0.017‐0.023 | 0.759 |
| Weighted median | 0.008 (0.009) | −0.01‐0.026 | 0.350 |
| MR‐Egger | 0.029 (0.023) | −0.016‐0.074 | 0.260 |
| MR‐Egger intercept | −0.001 (0.001) | −0.003‐0.001 | 0.353 |
Cochran's Q statistic: inverse‐variance weighted analysis 5.30 (SNPs 5), P = 0.505
| Sensitivity analysis: variants from the CHARGE consortium |
| Effects of genetically proxied IL‐6 signal inhibition on renal function |
| Chronic kidney disease |
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| Log estimated glomerular filtration rate |
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| Blood urea nitrogen |
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