Literature DB >> 29347576

Multiscale Granger causality.

Luca Faes1, Giandomenico Nollo1, Sebastiano Stramaglia2, Daniele Marinazzo3.   

Abstract

In the study of complex physical and biological systems represented by multivariate stochastic processes, an issue of great relevance is the description of the system dynamics spanning multiple temporal scales. While methods to assess the dynamic complexity of individual processes at different time scales are well established, multiscale analysis of directed interactions has never been formalized theoretically, and empirical evaluations are complicated by practical issues such as filtering and downsampling. Here we extend the very popular measure of Granger causality (GC), a prominent tool for assessing directed lagged interactions between joint processes, to quantify information transfer across multiple time scales. We show that the multiscale processing of a vector autoregressive (AR) process introduces a moving average (MA) component, and describe how to represent the resulting ARMA process using state space (SS) models and to combine the SS model parameters for computing exact GC values at arbitrarily large time scales. We exploit the theoretical formulation to identify peculiar features of multiscale GC in basic AR processes, and demonstrate with numerical simulations the much larger estimation accuracy of the SS approach compared to pure AR modeling of filtered and downsampled data. The improved computational reliability is exploited to disclose meaningful multiscale patterns of information transfer between global temperature and carbon dioxide concentration time series, both in paleoclimate and in recent years.

Entities:  

Year:  2017        PMID: 29347576     DOI: 10.1103/PhysRevE.96.042150

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  14 in total

1.  Estimation of Granger causality through Artificial Neural Networks: applications to physiological systems and chaotic electronic oscillators.

Authors:  Yuri Antonacci; Ludovico Minati; Luca Faes; Riccardo Pernice; Giandomenico Nollo; Jlenia Toppi; Antonio Pietrabissa; Laura Astolfi
Journal:  PeerJ Comput Sci       Date:  2021-05-18

2.  Estimation of Vector Autoregressive Parameters and Granger Causality From Noisy Multichannel Data.

Authors:  Prashant Rangarajan; Rajesh P N Rao
Journal:  IEEE Trans Biomed Eng       Date:  2018-12-18       Impact factor: 4.538

3.  Measuring spectrally-resolved information transfer.

Authors:  Edoardo Pinzuti; Patricia Wollstadt; Aaron Gutknecht; Oliver Tüscher; Michael Wibral
Journal:  PLoS Comput Biol       Date:  2020-12-28       Impact factor: 4.475

4.  Information Transfer in Linear Multivariate Processes Assessed through Penalized Regression Techniques: Validation and Application to Physiological Networks.

Authors:  Yuri Antonacci; Laura Astolfi; Giandomenico Nollo; Luca Faes
Journal:  Entropy (Basel)       Date:  2020-07-01       Impact factor: 2.524

5.  Statistical Perspective on Functional and Causal Neural Connectomics: A Comparative Study.

Authors:  Rahul Biswas; Eli Shlizerman
Journal:  Front Syst Neurosci       Date:  2022-03-02

6.  Matlab Open Source Code: Noise-Assisted Multivariate Empirical Mode Decomposition Based Causal Decomposition for Causality Inference of Bivariate Time Series.

Authors:  Yi Zhang; Guan Wang; Ziwen Li; Mingjun Xie; Branko Celler; Steven Su; Peng Xu; Dezhong Yao
Journal:  Front Neuroinform       Date:  2022-06-16       Impact factor: 3.739

7.  Multivariate model for cooperation: bridging social physiological compliance and hyperscanning.

Authors:  Nicolina Sciaraffa; Jieqiong Liu; Pietro Aricò; Gianluca Di Flumeri; Bianca M S Inguscio; Gianluca Borghini; Fabio Babiloni
Journal:  Soc Cogn Affect Neurosci       Date:  2021-01-18       Impact factor: 3.436

8.  Dynamic visual cortical connectivity analysis based on functional magnetic resonance imaging.

Authors:  Le Zhao; Weiming Zeng; Yuhu Shi; Weifang Nie; Jiajun Yang
Journal:  Brain Behav       Date:  2020-06-07       Impact factor: 2.708

9.  Taming the Unknown Unknowns in Complex Systems: Challenges and Opportunities for Modeling, Analysis and Control of Complex (Biological) Collectives.

Authors:  Paul Bogdan
Journal:  Front Physiol       Date:  2019-12-03       Impact factor: 4.566

10.  Variability and Reproducibility of Directed and Undirected Functional MRI Connectomes in the Human Brain.

Authors:  Allegra Conti; Andrea Duggento; Maria Guerrisi; Luca Passamonti; Iole Indovina; Nicola Toschi
Journal:  Entropy (Basel)       Date:  2019-07-06       Impact factor: 2.524

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