Literature DB >> 33271569

Metabolomics: The Stethoscope for the Twenty-First Century.

Hutan Ashrafian1, Viknesh Sounderajah1, Robert Glen1,2, Timothy Ebbels1, Benjamin J Blaise1, Dipak Kalra3, Kim Kultima4, Ola Spjuth5, Leonardo Tenori6, Reza M Salek7, Namrata Kale7, Kenneth Haug7, Daniel Schober8, Philippe Rocca-Serra9, Claire O'Donovan7, Christoph Steinbeck10, Isaac Cano11, Pedro de Atauri12, Marta Cascante12.   

Abstract

Metabolomics encompasses the systematic identification and quantification of all metabolic products in the human body. This field could provide clinicians with novel sets of diagnostic biomarkers for disease states in addition to quantifying treatment response to medications at an individualized level. This literature review aims to highlight the technology underpinning metabolic profiling, identify potential applications of metabolomics in clinical practice, and discuss the translational challenges that the field faces. We searched PubMed, MEDLINE, and EMBASE for primary and secondary research articles regarding clinical applications of metabolomics. Metabolic profiling can be performed using mass spectrometry and nuclear magnetic resonance-based techniques using a variety of biological samples. This is carried out in vivo or in vitro following careful sample collection, preparation, and analysis. The potential clinical applications constitute disruptive innovations in their respective specialities, particularly oncology and metabolic medicine. Outstanding issues currently preventing widespread clinical use are scalability of data interpretation, standardization of sample handling practice, and e-infrastructure. Routine utilization of metabolomics at a patient and population level will constitute an integral part of future healthcare provision.
© 2020 The Author(s) Published by S. Karger AG, Basel.

Entities:  

Keywords:  Metabolomics; Personalised medicine; Precision medicine

Mesh:

Year:  2020        PMID: 33271569      PMCID: PMC8436726          DOI: 10.1159/000513545

Source DB:  PubMed          Journal:  Med Princ Pract        ISSN: 1011-7571            Impact factor:   2.132


  71 in total

Review 1.  Integrated metabolomics and genomics: systems approaches to biomarkers and mechanisms of cardiovascular disease.

Authors:  Svati H Shah; Christopher B Newgard
Journal:  Circ Cardiovasc Genet       Date:  2015-04

2.  Biologically Consistent Annotation of Metabolomics Data.

Authors:  Nicholas Alden; Smitha Krishnan; Vladimir Porokhin; Ravali Raju; Kyle McElearney; Alan Gilbert; Kyongbum Lee
Journal:  Anal Chem       Date:  2017-12-01       Impact factor: 6.986

Review 3.  Metabolomics markers in Neurology: current knowledge and future perspectives for therapeutic targeting.

Authors:  Roberta Bonomo; Guido Cavaletti; Debra J Skene
Journal:  Expert Rev Neurother       Date:  2020-06-27       Impact factor: 4.618

4.  Identification of a serum-detectable metabolomic fingerprint potentially correlated with the presence of micrometastatic disease in early breast cancer patients at varying risks of disease relapse by traditional prognostic methods.

Authors:  C Oakman; L Tenori; W M Claudino; S Cappadona; S Nepi; A Battaglia; P Bernini; E Zafarana; E Saccenti; M Fornier; P G Morris; L Biganzoli; C Luchinat; I Bertini; A Di Leo
Journal:  Ann Oncol       Date:  2011-01-03       Impact factor: 32.976

5.  ¹H NMR-based metabolomic study of metabolic profiling for systemic lupus erythematosus.

Authors:  X Ouyang; Y Dai; J L Wen; L X Wang
Journal:  Lupus       Date:  2011-10-05       Impact factor: 2.911

6.  Serum metabolic profiling in inflammatory bowel disease.

Authors:  Horace R T Williams; James D Willsmore; I Jane Cox; David G Walker; Jeremy F L Cobbold; Simon D Taylor-Robinson; Timothy R Orchard
Journal:  Dig Dis Sci       Date:  2012-04-10       Impact factor: 3.199

Review 7.  Preanalytical Processing and Biobanking Procedures of Biological Samples for Metabolomics Research: A White Paper, Community Perspective (for "Precision Medicine and Pharmacometabolomics Task Group"-The Metabolomics Society Initiative).

Authors:  Jennifer A Kirwan; Lorraine Brennan; David Broadhurst; Oliver Fiehn; Marta Cascante; Warwick B Dunn; Michael A Schmidt; Vidya Velagapudi
Journal:  Clin Chem       Date:  2018-06-19       Impact factor: 8.327

8.  Metabolomics enables precision medicine: "A White Paper, Community Perspective".

Authors:  Richard D Beger; Warwick Dunn; Michael A Schmidt; Steven S Gross; Jennifer A Kirwan; Marta Cascante; Lorraine Brennan; David S Wishart; Matej Oresic; Thomas Hankemeier; David I Broadhurst; Andrew N Lane; Karsten Suhre; Gabi Kastenmüller; Susan J Sumner; Ines Thiele; Oliver Fiehn; Rima Kaddurah-Daouk
Journal:  Metabolomics       Date:  2016-09-02       Impact factor: 4.290

9.  Urinary metabolic biomarker and pathway study of hepatitis B virus infected patients based on UPLC-MS system.

Authors:  Aihua Zhang; Hui Sun; Ying Han; Guangli Yan; Xijun Wang
Journal:  PLoS One       Date:  2013-05-16       Impact factor: 3.240

Review 10.  Microbiome, Metabolome and Inflammatory Bowel Disease.

Authors:  Ishfaq Ahmed; Badal C Roy; Salman A Khan; Seth Septer; Shahid Umar
Journal:  Microorganisms       Date:  2016-06-15
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  8 in total

1.  Towards Unbiased Evaluation of Ionization Performance in LC-HRMS Metabolomics Method Development.

Authors:  Carsten Jaeger; Jan Lisec
Journal:  Metabolites       Date:  2022-05-10

2.  Severe homocysteinemia in two givosiran-treated porphyria patients: is free heme deficiency the culprit?

Authors:  Petro E Petrides; Michael Klein; Elfriede Schuhmann; Heike Torkler; Brigitte Molitor; Christian Loehr; Zahra Obermeier; Maria K Beykirch
Journal:  Ann Hematol       Date:  2021-05-29       Impact factor: 3.673

3.  Special Issue on "The Application of Metabolomics in Clinical Practice: Challenges and Opportunities".

Authors:  Michele Mussap
Journal:  Metabolites       Date:  2022-03-28

4.  Serum Colorectal Cancer Biomarkers Unraveled by NMR Metabolomics: Past, Present, and Future.

Authors:  Ana M Salmerón; Ana I Tristán; Ana C Abreu; Ignacio Fernández
Journal:  Anal Chem       Date:  2021-11-22       Impact factor: 6.986

Review 5.  Metabolomic Fingerprinting for the Detection of Early-Stage Lung Cancer: From the Genome to the Metabolome.

Authors:  Jean-François Haince; Philippe Joubert; Horacio Bach; Rashid Ahmed Bux; Paramjit S Tappia; Bram Ramjiawan
Journal:  Int J Mol Sci       Date:  2022-01-21       Impact factor: 5.923

Review 6.  Inflammatory Bowel Disease and COVID-19: How Microbiomics and Metabolomics Depict Two Sides of the Same Coin.

Authors:  Gian Mario Cortes; Maria Antonietta Marcialis; Flaminia Bardanzellu; Angelica Corrias; Vassilios Fanos; Michele Mussap
Journal:  Front Microbiol       Date:  2022-03-21       Impact factor: 6.064

Review 7.  The exposome paradigm to predict environmental health in terms of systemic homeostasis and resource balance based on NMR data science.

Authors:  Jun Kikuchi; Shunji Yamada
Journal:  RSC Adv       Date:  2021-09-13       Impact factor: 4.036

Review 8.  Understanding How Heart Metabolic Derangement Shows Differential Stage Specificity for Heart Failure with Preserved and Reduced Ejection Fraction.

Authors:  Federico Ferro; Renza Spelat; Camilla Valente; Paolo Contessotto
Journal:  Biomolecules       Date:  2022-07-11
  8 in total

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