Literature DB >> 33237748

Phenylalanine Mutation to Cyclohexylalanine Facilitates Triangular Trimer Formation by β-Hairpins Derived from Aβ.

Sepehr Haerianardakani1, Adam G Kreutzer1, Patrick J Salveson1, Tuan D Samdin1, Gretchen E Guaglianone1, James S Nowick1,2.   

Abstract

Oligomers of the β-amyloid peptide, Aβ, play a central role in the pathogenesis and progression of Alzheimer's disease. Trimers and higher-order oligomers composed of trimers are thought to be the most neurotoxic Aβ oligomers. To gain insights into the structure and assembly of Aβ oligomers, our laboratory has previously designed and synthesized macrocyclic peptides derived from Aβ17-23 and Aβ30-36 that fold to form β-hairpins and assemble to form trimers. In this study, we found that mutating Phe20 to cyclohexylalanine (Cha) in macrocyclic Aβ-derived peptides promotes crystallization of an Aβ-derived peptide containing the Aβ24-29 loop (peptide 3F20Cha) and permits elucidation of its structure and assembly by X-ray crystallography. X-ray crystallography shows that peptide 3F20Cha forms a hexamer. X-ray crystallography and SDS-PAGE further show that trimer 4F20Cha, a covalently stabilized trimer derived from peptide 3F20Cha, forms a dodecamer. Size exclusion chromatography shows that trimer 4F20Cha forms higher-order assemblies in solution. Trimer 4F20Cha exhibits cytotoxicity against the neuroblastoma cell line SH-SY5Y. These studies demonstrate the use of the F20Cha mutation to further stabilize oligomers of Aβ-derived peptides that contain more of the native sequence and thus better mimic the oligomers formed by full-length Aβ.

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Year:  2020        PMID: 33237748      PMCID: PMC7821965          DOI: 10.1021/jacs.0c09281

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  30 in total

1.  Naturally secreted oligomers of amyloid beta protein potently inhibit hippocampal long-term potentiation in vivo.

Authors:  Dominic M Walsh; Igor Klyubin; Julia V Fadeeva; William K Cullen; Roger Anwyl; Michael S Wolfe; Michael J Rowan; Dennis J Selkoe
Journal:  Nature       Date:  2002-04-04       Impact factor: 49.962

2.  Amyloid beta-protein: monomer structure and early aggregation states of Abeta42 and its Pro19 alloform.

Authors:  Summer L Bernstein; Thomas Wyttenbach; Andrij Baumketner; Joan-Emma Shea; Gal Bitan; David B Teplow; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2005-02-23       Impact factor: 15.419

3.  Controlling the Oligomerization State of Aβ-Derived Peptides with Light.

Authors:  Patrick J Salveson; Sepehr Haerianardakani; Alexander Thuy-Boun; Adam G Kreutzer; James S Nowick
Journal:  J Am Chem Soc       Date:  2018-04-20       Impact factor: 15.419

4.  Novel approach to phasing proteins: derivatization by short cryo-soaking with halides.

Authors:  Z Dauter; M Dauter; K R Rajashankar
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-02

5.  Selective aromatic interactions in beta-hairpin peptides.

Authors:  Chad D Tatko; Marcey L Waters
Journal:  J Am Chem Soc       Date:  2002-08-14       Impact factor: 15.419

6.  Antiparallel beta-sheet: a signature structure of the oligomeric amyloid beta-peptide.

Authors:  Emilie Cerf; Rabia Sarroukh; Shiori Tamamizu-Kato; Leonid Breydo; Sylvie Derclaye; Yves F Dufrêne; Vasanthy Narayanaswami; Erik Goormaghtigh; Jean-Marie Ruysschaert; Vincent Raussens
Journal:  Biochem J       Date:  2009-07-15       Impact factor: 3.857

7.  Amyloid β-Protein Assembly and Alzheimer's Disease: Dodecamers of Aβ42, but Not of Aβ40, Seed Fibril Formation.

Authors:  Nicholas J Economou; Maxwell J Giammona; Thanh D Do; Xueyun Zheng; David B Teplow; Steven K Buratto; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2016-02-04       Impact factor: 15.419

Review 8.  The Amyloid-β Oligomer Hypothesis: Beginning of the Third Decade.

Authors:  Erika N Cline; Maíra Assunção Bicca; Kirsten L Viola; William L Klein
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

9.  The Alzheimer's amyloid-β(1-42) peptide forms off-pathway oligomers and fibrils that are distinguished structurally by intermolecular organization.

Authors:  William M Tay; Danting Huang; Terrone L Rosenberry; Anant K Paravastu
Journal:  J Mol Biol       Date:  2013-04-11       Impact factor: 5.469

10.  A Hexamer of a Peptide Derived from Aβ16-36.

Authors:  Adam G Kreutzer; Ryan K Spencer; Kate J McKnelly; Stan Yoo; Imane L Hamza; Patrick J Salveson; James S Nowick
Journal:  Biochemistry       Date:  2017-10-27       Impact factor: 3.162

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  3 in total

Review 1.  Exploring amyloid oligomers with peptide model systems.

Authors:  Tuan D Samdin; Adam G Kreutzer; James S Nowick
Journal:  Curr Opin Chem Biol       Date:  2021-07-03       Impact factor: 8.972

2.  Synthesis and study of macrocyclic β-hairpin peptides for investigating amyloid oligomers.

Authors:  Gretchen Guaglianone; Adam G Kreutzer; James S Nowick
Journal:  Methods Enzymol       Date:  2021-05-24       Impact factor: 1.682

3.  Elucidating the Oligomerization and Cellular Interactions of a Trimer Derived from Aβ through Fluorescence and Mass Spectrometric Studies.

Authors:  Gretchen Guaglianone; Belén Torrado; Yu-Fu Lin; Matthew C Watkins; Vicki H Wysocki; Enrico Gratton; James S Nowick
Journal:  ACS Chem Neurosci       Date:  2022-07-27       Impact factor: 5.780

  3 in total

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