Literature DB >> 10666615

Novel approach to phasing proteins: derivatization by short cryo-soaking with halides.

Z Dauter1, M Dauter, K R Rajashankar.   

Abstract

A quick (less than 1 min) soak of protein crystals in a cryo-solution containing bromide or iodide anions leads to incorporation of these anomalous scatterers into the ordered solvent region around the protein molecules. These halide anions provide a convenient way of phasing through their anomalous scattering signal: bromides using multiwavelength anomalous dispersion (MAD) and bromides and/or iodides using single-wavelength anomalous dispersion (SAD) or single isomorphous replacement with anomalous scattering (SIRAS) methods. This approach has been tested successfully on four different proteins and has been used to solve the structure of a new protein of molecular weight 30 kDa.

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Year:  2000        PMID: 10666615     DOI: 10.1107/s0907444999016352

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  90 in total

1.  Structure and DNA-binding properties of the cytolysin regulator CylR2 from Enterococcus faecalis.

Authors:  Sigrun Rumpel; Adelia Razeto; Chris M Pillar; Vinesh Vijayan; Austin Taylor; Karin Giller; Michael S Gilmore; Stefan Becker; Markus Zweckstetter
Journal:  EMBO J       Date:  2004-09-09       Impact factor: 11.598

2.  Get5 carboxyl-terminal domain is a novel dimerization motif that tethers an extended Get4/Get5 complex.

Authors:  Justin W Chartron; David G VanderVelde; Meera Rao; William M Clemons
Journal:  J Biol Chem       Date:  2012-01-17       Impact factor: 5.157

3.  Structure of the cytoplasmic domain of Yersinia pestis YscD, an essential component of the type III secretion system.

Authors:  George T Lountos; Joseph E Tropea; David S Waugh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-02-07

4.  Structure of the signal transduction protein TRAP (target of RNAIII-activating protein).

Authors:  Kim Henrick; Miriam Hirshberg
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-06-22

5.  Structural basis for the acyltransferase activity of lecithin:retinol acyltransferase-like proteins.

Authors:  Marcin Golczak; Philip D Kiser; Avery E Sears; David T Lodowski; William S Blaner; Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2012-05-17       Impact factor: 5.157

6.  Structure of a fibronectin type III-like module from Clostridium thermocellum.

Authors:  Markus Alahuhta; Qi Xu; Roman Brunecky; William S Adney; Shi-You Ding; Michael E Himmel; Vladimir V Lunin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-27

7.  Purification, crystallization and preliminary X-ray diffraction analysis of the lytic transglycosylase MltF from Escherichia coli.

Authors:  Pramod K Madoori; Andy Mark W H Thunnissen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

8.  High-Resolution Cryo-EM Maps and Models: A Crystallographer's Perspective.

Authors:  Alexander Wlodawer; Mi Li; Zbigniew Dauter
Journal:  Structure       Date:  2017-08-31       Impact factor: 5.006

9.  Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer.

Authors:  Dan E McNamara; Duilio Cascio; Julien Jorda; Cheene Bustos; Tzu-Chi Wang; Madeline E Rasche; Todd O Yeates; Thomas A Bobik
Journal:  J Biol Chem       Date:  2014-02-12       Impact factor: 5.157

10.  Extracytoplasmic PAS-like domains are common in signal transduction proteins.

Authors:  Changsoo Chang; Christine Tesar; Minyi Gu; Gyorgy Babnigg; Andrzej Joachimiak; P Raj Pokkuluri; Hendrik Szurmant; Marianne Schiffer
Journal:  J Bacteriol       Date:  2009-12-11       Impact factor: 3.490

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